These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2517#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence [CCGGTGCGAGCTGTGCAAGAAGGAGTTCCTCTACCCGTGCAATCTCAACCAGCACAAGCAGCTGCACCATTCGAAGGAGAAGCCGCACGAGTGCCGCATCTGCCACTATCGCTTCGAGTACGTCGGCCACCTGCAGCGGCACATCCGGCAGCAGCACGAAAAGATGGCGGAGGAGCTGCTGGCGCCGGCGGAACCGCAAACGTTCGATTGCAACTTTTGCGGCGAATCGTTCGACTCGAAGCCTCTGCTAACGGCACACGTGCACACGTTGCACCGAGGCGAGAAGCCGTTCCAGTGTGACAAGTGTCCGGCTACGTTTAGCTATAAGAAATCTTACGAAACTCACCGAGAGGAACATTACTTGAAAGCCAGTAATGGAGCCTTCAAGTGCAGCTTCTGCAAGAAAACTTTCAACAGCGCACAAAAAGTAGACAACCATGTTTGCATTCAATAGTGAAACCGGAATATAGAACACCACTCTACAAAGTAATATAATATATATACTGAAGCAATGCTAACAATTTACGCTAAAAACAAACAAACAAAAACCGCCGATCGTTTGGTGGGAGATAGCGGCAGAACGGAGCGGTGGTGGCTAAAACAATACAAATTATAGCAGCTATAATGTATCTTTTTACAACACACACATACTCAACACATATGCGCCGAAAGCCTCGTGTAAG] [+] EMBL BM594692 [CCGGTGCGAGCTGTGCAAGAAGGAGTTCCTCTACCCGTGCAATCTCAACCAGCACAAGCAGCTGCACCATTCGAAGGAGAAGCCGCACGAGTGCCGCATCTGCCACTATCGCTTCGAGTACGTCGGCCACCTGCAGCGGCACATCCGGCAGCAGCACGAAAAGATGGCGGAGGAGCTGCTGGCGCCGGCGGAACCGCAAACGTTCGATTGCAACTTTTGCGGCGAATCGTTCGACTCGAAGCCTCTGCTAACGGCACACGTGCACACGTTGCACCGAGGCGAGAAGCCGTTCCAGTGTGACAAGTGTCCGGCTACGTTTAGCTATAAGAAATCTTACGAAACTCACCGAGAGGAACATTACTTGAAAGCCAGTAATGGAGCCTTCAAGTGCAGCTTCTGCAAGAAAACTTTCAACAGCGCACAAAAAGTAGACAACCATGTTTGCATTCAATAGTGAAACCGGAATATAGAACACCACTCTACAAAGTAATATAATATATATACTGAAGCAATGCTAACAATTTACGCTAAAAACAAACAAACAAAAACCGCCGATCGTTTGGTGGGAGATAGCGGCAGAACGGAGCGGTGGTGGCTAAAACAATACAAATTATAGCAGCTATAATGTATCTTTTTACAACACACACATACTCAACACATATGCGCCGAAAGCCTCGTGTAAG] consensusID : consensus_2517#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 97 fasta sequence [GCTAAAAAAAAAACAAACAAAAACCAGAACGTTTGTGTGGAGGATAGCGGCAGAACGAGCGGTGGTGGCTAAAACAATACAAATTATAGCAGCTATA] [+] EMBL BX612177 [GCTAAAAAAAAAACAAACAAAAACCAGAACGTTTGTGTGGAGGATAGCGGCAGAACGAGCGGTGGTGGCTAAAACAATACAAATTATAGCAGCTATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2517#0 CCGGTGCGAGCTGTGCAAGAAGGAGTTCCTCTACCCGTGCAATCTCAACCAGCACAAGCA 60 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 GCTGCACCATTCGAAGGAGAAGCCGCACGAGTGCCGCATCTGCCACTATCGCTTCGAGTA 120 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 CGTCGGCCACCTGCAGCGGCACATCCGGCAGCAGCACGAAAAGATGGCGGAGGAGCTGCT 180 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 GGCGCCGGCGGAACCGCAAACGTTCGATTGCAACTTTTGCGGCGAATCGTTCGACTCGAA 240 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 GCCTCTGCTAACGGCACACGTGCACACGTTGCACCGAGGCGAGAAGCCGTTCCAGTGTGA 300 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 CAAGTGTCCGGCTACGTTTAGCTATAAGAAATCTTACGAAACTCACCGAGAGGAACATTA 360 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 CTTGAAAGCCAGTAATGGAGCCTTCAAGTGCAGCTTCTGCAAGAAAACTTTCAACAGCGC 420 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 ACAAAAAGTAGACAACCATGTTTGCATTCAATAGTGAAACCGGAATATAGAACACCACTC 480 consensus_2517#1 ------------------------------------------------------------ consensus_2517#0 TACAAAGTAATATAATATATATACTGAAGCAATGCTAACAATTTACGCTAAAAACAAA-C 539 consensus_2517#1 ----------------------------------------------GCTAAAAAAAAAAC 14 ******** *** * consensus_2517#0 AAACAAAAACCGCCGATCGTTTG-GTGGGAGATAGCGGCAGAACGGAGCGGTGGTGGCTA 598 consensus_2517#1 AAACAAAAACCA--GAACGTTTGTGTGGAGGATAGCGGCAGAACG-AGCGGTGGTGGCTA 71 *********** ** ****** **** *************** ************** consensus_2517#0 AAACAATACAAATTATAGCAGCTATAATGTATCTTTTTACAACACACACATACTCAACAC 658 consensus_2517#1 AAACAATACAAATTATAGCAGCTATA---------------------------------- 97 ************************** consensus_2517#0 ATATGCGCCGAAAGCCTCGTGTAAG 683 consensus_2517#1 ------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||