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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2531#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence
[ATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTTGTACACTTTTTCGGCCTCAGTAGCGGTGGTGGTGGTGGAACCGAAGCAGGATAATGTGTTTGCACTGCCACTGACCAGCATACTGAAGGCGTCGGCCGGGAAGCTTTCCGGCGTGAGTGCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCCAACGCTCCAGCACGATCTGCCCCAGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCTACAGTGAAGCGTTCGAGGCCGATGCCCTGGAACCGACGCGCGTATCGTTGCTTAGTACAACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAACGACCACCCAGGAGCCGGCACCGCTGGAACCGACCGATCCGGTCGAGCCGGAAGCAGCACCGGAAAACCCAACCACGGTCGAGCCGGAAGAGCCAGCTACCAGCGCACCGGTGACTGTGGAGGATGCACCGGCCCAGGAGGGCAGTACCGAAGCATCCGGCGCCATCGCGCCCGAAGACGTGAACCGCCTGTCCGATGCGAGCCTCAGCGCACGGAACGATGTGCGGGANGAGAGCTTCCGACCGACGCCGATCCCGCTGGTAAGCTATCAGCATTACGT]
[+] EMBL BX620125 [ATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTTGTACACTTTTTCGGCCTCAGTAGCGGTGGTGGTGGTGGAACCGAAGCAGGATAATGTGTTTGCACTGCCACTGACCAGCATACTGAAGGCGTCGGCCGGGAAGCTTTCCGGCGTGAGTGCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCCAACGCTCCAGCACGATCTGCCCCAGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCTACAGTGAAGCGTTCGAGGCCGATGCCCTGGAACCGACGCGCGTATCGTTGCTTAGTACAACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAACGACCACCCAGGAGCCGGCACCGCTGGAACCGACCGATCCGGTCGAGCCGGAAGCAGCACCGGAAAACCCAACCACGGTCGAGCCGGAAGAGCCAGCTACCAGCGCACCGGTGACTGTGGAGGATGCACCGGCCCAGGAGGGCAGTACCGAAGCATCCGGCGCCATCGCGCCCGAAGACGTGAACCGCCTGTCCGATGCGAGCCTCAGCGCACGGAACGATGTGCGGGANGAGAGCTTCCGACCGACGCCGATCCCGCTGGTAAGCTATCAGCATTACGT]
consensusID : consensus_2531#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence
[AAGAATNGCCCCGAGGATCTGCGCGAAATGGTGTGTGTGTGCGCGCTGTTTTGCTAGAATTGATGGGCTAAGGAAACGGTCCATAAAAGTGTTCCACCATGAAGTGTGCCGTGTATCTGTGCCTTTTGGCAACGTTTGCTCTCGCGATCCCCAGTGCGGTGTGTGATCGTGCCGAGGAGCAGGACCTGACATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTTTGTACACTTTTTCGGCCTCAGTAGCTGGTGGTGGTGGTGGTGGTTCGAAAAAGTGTGGAACCGAAGCAGGATAATGTGTTTGCACTGCCACTGACCATGCATACTGAAGGCGTCTGGCCGGGAAGCTTTCCTGGCNGTGAGTTGCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCCAACGCTCCAGCACGATCTGNNCCCAGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCTACAGTGAAGCGTTCGAGGCGATGCCCTGGAACCTGACGCGCGTATCGTTGCTTAGTACAACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAAACGACCAACCCAGGGAGCCGGCNCCGCTGGAACC]
[+] EMBL AL931191 [AAGAATNGCCCCGAGGATCTGCGCGAAATGGTGTGTGTGTGCGCGCTGTTTTGCTAGAATTGATGGGCTAAGGAAACGGTCCATAAAAGTGTTCCACCATGAAGTGTGCCGTGTATCTGTGCCTTTTGGCAACGTTTGCTCTCGCGATCCCCAGTGCGGTGTGTGATCGTGCCGAGGAGCAGGACCTGACATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTTTGTACACTTTTTCGGCCTCAGTAGCTGGTGGTGGTGGTGGTGGTTCGAAAAAGTGTGGAACCGAAGCAGGATAATGTGTTTGCACTGCCACTGACCATGCATACTGAAGGCGTCTGGCCGGGAAGCTTTCCTGGCNGTGAGTTGCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCCAACGCTCCAGCACGATCTGNNCCCAGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCTACAGTGAAGCGTTCGAGGCGATGCCCTGGAACCTGACGCGCGTATCGTTGCTTAGTACAACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAAACGACCAACCCAGGGAGCCGGCNCCGCTGGAACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2531#0 ------------------------------------------------------------
consensus_2531#1 AAGAATNGCCCCGAGGATCTGCGCGAAATGGTGTGTGTGTGCGCGCTGTTTTGCTAGAAT 60
consensus_2531#0 ------------------------------------------------------------
consensus_2531#1 TGATGGGCTAAGGAAACGGTCCATAAAAGTGTTCCACCATGAAGTGTGCCGTGTATCTGT 120
consensus_2531#0 ------------------------------------------------------------
consensus_2531#1 GCCTTTTGGCAACGTTTGCTCTCGCGATCCCCAGTGCGGTGTGTGATCGTGCCGAGGAGC 180
consensus_2531#0 ----------ATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTT-GTA 49
consensus_2531#1 AGGACCTGACATTGCGCCGAAACCGCAGAACGGTGCAGTTCCTGGTTAATCATTTTTGTA 240
********************************************** ***
consensus_2531#0 CACTTTTTCGGCCTCAGTAGC-GGTGGTGGTGGTGG------------------AACCGA 90
consensus_2531#1 CACTTTTTCGGCCTCAGTAGCTGGTGGTGGTGGTGGTGGTTCGAAAAAGTGTGGAACCGA 300
********************* ************** ******
consensus_2531#0 AGCAGGATAATGTGTTTGCACTGCCACTGACCA-GCATACTGAAGGCGTC-GGCCGGGAA 148
consensus_2531#1 AGCAGGATAATGTGTTTGCACTGCCACTGACCATGCATACTGAAGGCGTCTGGCCGGGAA 360
********************************* **************** *********
consensus_2531#0 GCTTTCCGG--CGTGAGT-GCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCC 205
consensus_2531#1 GCTTTCCTGGCNGTGAGTTGCACCCAAGCACAAGCAACCGTCGTCGGCGGAACGTGAGCC 420
******* * ****** *****************************************
consensus_2531#0 AACGCTCCAGCACGATCTGCCCC-AGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCT 264
consensus_2531#1 AACGCTCCAGCACGATCTGNNCCCAGTGGATCGATCGTCCGCACAAGCAGGCCAATCCCT 480
******************* ** ************************************
consensus_2531#0 ACAGTGAAGCGTTCGAGGCCGATGCCCTGGAACC-GACGCGCGTATCGTTGCTTAGTACA 323
consensus_2531#1 ACAGTGAAGCGTTCGAGGC-GATGCCCTGGAACCTGACGCGCGTATCGTTGCTTAGTACA 539
******************* ************** *************************
consensus_2531#0 ACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAA-CGAC 382
consensus_2531#1 ACGCGCGAGCCAGAGGAAACCACTACGACCAGCACGACTACGGAAGCGCCAGTAAACGAC 599
******************************************************* ****
consensus_2531#0 CACCC--AGGAGCCGGCACCGCTGGAACCGACCGATCCGGTCGAGCCGGAAGCAGCACCG 440
consensus_2531#1 CAACCCAGGGAGCCGGCNCCGCTGGAACC------------------------------- 628
** ** ********* ***********
consensus_2531#0 GAAAACCCAACCACGGTCGAGCCGGAAGAGCCAGCTACCAGCGCACCGGTGACTGTGGAG 500
consensus_2531#1 ------------------------------------------------------------
consensus_2531#0 GATGCACCGGCCCAGGAGGGCAGTACCGAAGCATCCGGCGCCATCGCGCCCGAAGACGTG 560
consensus_2531#1 ------------------------------------------------------------
consensus_2531#0 AACCGCCTGTCCGATGCGAGCCTCAGCGCACGGAACGATGTGCGGGANGAGAGCTTCCGA 620
consensus_2531#1 ------------------------------------------------------------
consensus_2531#0 CCGACGCCGATCCCGCTGGTAAGCTATCAGCATTACGT 658
consensus_2531#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||