These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2626#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence [AGTGTCCGAACTGTTCGACGAAACGCTGTCGAATCTTTCCTCGGCCGTCGTGGAGGAAGGTCACGAGACGGACGAGTTCTTTGATGCGGTTGGTGGGCAGAACAGGCATCACTATCACAGTCTGCTCGGGTCGGAGCAGTGTTACGACTTTACGCCACGCATCTTCCACCTGACCAGTATCAACAATGGCAACTTTGAGGCGACCGAGCTACAGTGTGCGCTGCGTGCGAAGGACCGCCCCACGGCGTACCCGTTCCGGCAGGAGGATCTTTACAGCGCCCATCAGCCAACGATCTTCCTGATCGATAATGGGCACGTGCTGTGGCTGTGGCACGGGCTGGTGGCCGACGGGCGACGAGTCGGGCAGCGACAGTGGCGCCGGCGGCGAGACGAACCACAGCAGCTTCGACAGCAACCGGTCGGGCGAGAACCGGTGGCAGGTGGAGCCGGCGGGTCGCAATGGAGACGGCCGTCTCGTACTGGAAGGCGAAACAGCGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATGGGCATGCGAT] [+] EMBL AL934613 [AGTGTCCGAACTGTTCGACGAAACGCTGTCGAATCTTTCCTCGGCCGTCGTGGAGGAAGGTCACGAGACGGACGAGTTCTTTGATGCGGTTGGTGGGCAGAACAGGCATCACTATCACAGTCTGCTCGGGTCGGAGCAGTGTTACGACTTTACGCCACGCATCTTCCACCTGACCAGTATCAACAATGGCAACTTTGAGGCGACCGAGCTACAGTGTGCGCTGCGTGCGAAGGACCGCCCCACGGCGTACCCGTTCCGGCAGGAGGATCTTTACAGCGCCCATCAGCCAACGATCTTCCTGATCGATAATGGGCACGTGCTGTGGCTGTGGCACGGGCTGGTGGCCGACGGGCGACGAGTCGGGCAGCGACAGTGGCGCCGGCGGCGAGACGAACCACAGCAGCTTCGACAGCAACCGGTCGGGCGAGAACCGGTGGCAGGTGGAGCCGGCGGGTCGCAATGGAGACGGCCGTCTCGTACTGGAAGGCGAAACAGCGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATGGGCATGCGAT] consensusID : consensus_2626#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 302 fasta sequence [TCGGCCACGAGGNTGGATGGCAGGTGGAGCGGCGGGTCCGCAATGGAGACGGCCGTCTCGTACTGGAAGGCGAAACAGCGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATGGGCATGCGATTGCTACTACGGCGACGACACGACNGCGGATGAGAATGGAAACGATGAGCAGGGGTGTGGATGAGGTCGATGCCAAGACGACGACGGACCGGCAGCAGGAGCATCACCGTGTGGAGACCACCGGCGACCGACTGCTGCTCCGGATGACCACGTGCATGGGTTCGTCAGGATCTGG] [+] EMBL BX469495 [TCGGCCACGAGGNTGGATGGCAGGTGGAGCGGCGGGTCCGCAATGGAGACGGCCGTCTCGTACTGGAAGGCGAAACAGCGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATGGGCATGCGATTGCTACTACGGCGACGACACGACNGCGGATGAGAATGGAAACGATGAGCAGGGGTGTGGATGAGGTCGATGCCAAGACGACGACGGACCGGCAGCAGGAGCATCACCGTGTGGAGACCACCGGCGACCGACTGCTGCTCCGGATGACCACGTGCATGGGTTCGTCAGGATCTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2626#0 AGTGTCCGAACTGTTCGACGAAACGCTGTCGAATCTTTCCTCGGCCGTCGTGGAGGAAGG 60 consensus_2626#1 ------------------------------------------------------------ consensus_2626#0 TCACGAGACGGACGAGTTCTTTGATGCGGTTGGTGGGCAGAACAGGCATCACTATCACAG 120 consensus_2626#1 ------------------------------------------------------------ consensus_2626#0 TCTGCTCGGGTCGGAGCAGTGTTACGACTTTACGCCACGCATCTTCCACCTGACCAGTAT 180 consensus_2626#1 -------------------------------------------------TCGGCCACGAG 11 * *** * consensus_2626#0 CAACAATGGCAACTTTGAGGCGACCGAGCTACAGTGTGCGCTGCGTGCGAAGGACCGCCC 240 consensus_2626#1 GNTGGATGGCAGG--TGGAGCGGCGGGTCCGCAATGGAGACGGC-CGTCTCGTACTGG-- 66 ****** ** *** * * * ** ** * ** * * ** * consensus_2626#0 CACGGCGTACCCGTTCCGGCAGGAGGATCTTTAC-AGCGCCCATCAGCCAACGATCTTCC 299 consensus_2626#1 -AAGGCGAAACAG---CGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATGGGCA 122 * **** * * * ******* * * * * * *** * * ** * consensus_2626#0 TGATCGATAATGGGCACGTGCTGTGGCTGTGGCACGGGCTGGTGGCCGACGGGCGACGAG 359 consensus_2626#1 TG--CGATTGCTACTACG-GCGACGAC-ACGACNGCGGATGAGAATGGA--AACGATGAG 176 ** **** *** ** * * * * ** ** ** *** *** consensus_2626#0 TCGGGCAGCGACAGTGGCGCCGGCGGCGAGACGA-ACCACAGCAGCTTCGACAGCAAC-C 417 consensus_2626#1 CAGGGGTGTG--GATGAGGTCGATGCCAAGACGACGACGGACCGGCAGCAGGAGCATCAC 234 *** * * ** * ** * * ****** * * * ** * **** * * consensus_2626#0 GGTCGGGCGAGAACCGGTGGCAGGTGGAGCCGGCGGGTCGCAATGGAGACGG--CCGTCT 475 consensus_2626#1 CGTGTGGAGACCACCGGCGACCGACTGCTGCTCCGGATGACCACGTGCATGGGTTCGTCA 294 ** ** ** ***** * * * * * *** * * * * * ** **** consensus_2626#0 CGTACTGGAAGGCGAAACAGCGGCAGGCAGGTGTGGGCGAACGCGTGACGAATGGCAATG 535 consensus_2626#1 GGATCTGG---------------------------------------------------- 302 * **** consensus_2626#0 GGCATGCGAT 545 consensus_2626#1 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||