cluster # 2632

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Anopheles gambiae
cluster # 2632 cluster # 2632 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2632#0 length = 679 sequences # 1

consensus_2632#1 length = 317 sequences # 1

consensusID : consensus_2632#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [AAATCCTGGCTCTACCAAACGTGTATCTACGTGTGCCTGATGGTGGTCGTTAAGCTGATAACGACGCTAATCATTCAGTTCGATGTGTGGGATAACGTGAAAAACTTCGTCCTGTCGCCGTTCCGGGATCCGCGGATAGAGCTGGCCGTCGTGATGCTGGTCATTCCGTTCTTCGTCAATATCCTAATCTTCTGGGTGACGGATAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAACACGGCGGCCGGCAGCTCGCACCACGCGCACGGTCGGGAGCATAGCTTGCTGCAAAAAGTAAAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCAGGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGTGGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTTCTCGGGGCGCCACTATCACCACACGCAGCATGCACCTTTCCTCCATCAGCATCACGCATATCTGCAGACGACCACGATGGCGGACGGCACGTCAGTGGTGCCGGCGGCGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGGGGTTCCTCCTCCCTGCTGACGCCGCTCGACATGGGACACGGCCATCGTGCTGACGCGAACATCACCCGGGGCCGACGAA]

[+] EMBL BX623864             [AAATCCTGGCTCTACCAAACGTGTATCTACGTGTGCCTGATGGTGGTCGTTAAGCTGATAACGACGCTAATCATTCAGTTCGATGTGTGGGATAACGTGAAAAACTTCGTCCTGTCGCCGTTCCGGGATCCGCGGATAGAGCTGGCCGTCGTGATGCTGGTCATTCCGTTCTTCGTCAATATCCTAATCTTCTGGGTGACGGATAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAACACGGCGGCCGGCAGCTCGCACCACGCGCACGGTCGGGAGCATAGCTTGCTGCAAAAAGTAAAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCAGGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGTGGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTTCTCGGGGCGCCACTATCACCACACGCAGCATGCACCTTTCCTCCATCAGCATCACGCATATCTGCAGACGACCACGATGGCGGACGGCACGTCAGTGGTGCCGGCGGCGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGGGGTTCCTCCTCCCTGCTGACGCCGCTCGACATGGGACACGGCCATCGTGCTGACGCGAACATCACCCGGGGCCGACGAA]




>consensus_2632#0
AAATCCTGGCTCTACCAAACGTGTATCTACGTGTGCCTGATGGTGGTCGTTAAGCTGATA
ACGACGCTAATCATTCAGTTCGATGTGTGGGATAACGTGAAAAACTTCGTCCTGTCGCCG
TTCCGGGATCCGCGGATAGAGCTGGCCGTCGTGATGCTGGTCATTCCGTTCTTCGTCAAT
ATCCTAATCTTCTGGGTGACGGATAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAAC
ACGGCGGCCGGCAGCTCGCACCACGCGCACGGTCGGGAGCATAGCTTGCTGCAAAAAGTA
AAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCA
GGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGT
GGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTTCTCGGGGCGCCACTATCACCACACG
CAGCATGCACCTTTCCTCCATCAGCATCACGCATATCTGCAGACGACCACGATGGCGGAC
GGCACGTCAGTGGTGCCGGCGGCGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGG
GGTTCCTCCTCCCTGCTGACGCCGCTCGACATGGGACACGGCCATCGTGCTGACGCGAAC
ATCACCCGGGGCCGACGAA

consensusID : consensus_2632#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 317
fasta sequence

                              [TAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAACACGGCGGCCGGCAGCTCGCACCACGCGCACGGTTGGGAGCATAGCTTGCTGCAAAAAGTAAAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCAGGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGTGGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGGGGTTCCTCCTCCCTGCTGACGCCGCTCGACATGG]

[+] EMBL BX607036             [TAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAACACGGCGGCCGGCAGCTCGCACCACGCGCACGGTTGGGAGCATAGCTTGCTGCAAAAAGTAAAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCAGGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGTGGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGGGGTTCCTCCTCCCTGCTGACGCCGCTCGACATGG]




>consensus_2632#1
TAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAACACGGCGGCCGGCAGCTCGCACCA
CGCGCACGGTTGGGAGCATAGCTTGCTGCAAAAAGTAAAATACAAAATGATACACAAAAC
CAAACCAAATGACTCAGAATCTGATACTCTTTTGTCAGGCGATGAAGAAATTTTAAGCTT
CAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGTGGTTTGGGGCAGAGCGTTACCAG
CAATCGGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGGGGTTCCTCCTCCCTGCT
GACGCCGCTCGACATGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2632#0      AAATCCTGGCTCTACCAAACGTGTATCTACGTGTGCCTGATGGTGGTCGTTAAGCTGATA 60
consensus_2632#1      ------------------------------------------------------------
                                                                                  

consensus_2632#0      ACGACGCTAATCATTCAGTTCGATGTGTGGGATAACGTGAAAAACTTCGTCCTGTCGCCG 120
consensus_2632#1      ------------------------------------------------------------
                                                                                  

consensus_2632#0      TTCCGGGATCCGCGGATAGAGCTGGCCGTCGTGATGCTGGTCATTCCGTTCTTCGTCAAT 180
consensus_2632#1      ------------------------------------------------------------
                                                                                  

consensus_2632#0      ATCCTAATCTTCTGGGTGACGGATAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAAC 240
consensus_2632#1      -----------------------TAACTTCCTGATGAGGCACACGCGCAAGAAGCGCAAC 37
                                             *************************************

consensus_2632#0      ACGGCGGCCGGCAGCTCGCACCACGCGCACGGTCGGGAGCATAGCTTGCTGCAAAAAGTA 300
consensus_2632#1      ACGGCGGCCGGCAGCTCGCACCACGCGCACGGTTGGGAGCATAGCTTGCTGCAAAAAGTA 97
                      ********************************* **************************

consensus_2632#0      AAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCA 360
consensus_2632#1      AAATACAAAATGATACACAAAACCAAACCAAATGACTCAGAATCTGATACTCTTTTGTCA 157
                      ************************************************************

consensus_2632#0      GGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGT 420
consensus_2632#1      GGCGATGAAGAAATTTTAAGCTTCAGTACGCCCAACGGTGGTGGTGGCGGCGGTGGTGGT 217
                      ************************************************************

consensus_2632#0      GGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTTCTCGGGGCGCCACTATCACCACACG 480
consensus_2632#1      GGTTTGGGGCAGAGCGTTACCAGCAATCGGTCCTCGTCGATG-GCGGGCAGCAGTGGCAG 276
                      **********************************  ***  * **    * **      *

consensus_2632#0      CAGCATGCACCTTTCCTCCATCAGCATCACGCATATCTGCAGACGACCACGATGGCGGAC 540
consensus_2632#1      CAGTGGGGGTTCCTCCTCCCT--GC-TGACGCCGCTCGACATGG---------------- 317
                      ***   *      ****** *  ** * ****   **  **                   

consensus_2632#0      GGCACGTCAGTGGTGCCGGCGGCGTCCTCGTCGATGGCGGGCAGCAGTGGCAGCAGTGGG 600
consensus_2632#1      ------------------------------------------------------------
                                                                                  

consensus_2632#0      GGTTCCTCCTCCCTGCTGACGCCGCTCGACATGGGACACGGCCATCGTGCTGACGCGAAC 660
consensus_2632#1      ------------------------------------------------------------
                                                                                  

consensus_2632#0      ATCACCCGGGGCCGACGAA 679
consensus_2632#1      -------------------