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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2671#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 838 fasta sequence
[AGGTCGGATCTTGACCGAGTCCTTTCAGCCGACTGTACCATGCAGCTGTGCGCCGTAGTTTCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCACCTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCGGAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGTCTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCCATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAACAACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGACTTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCCCGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCGACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCGGCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACTTCTACCCGAACGGTGGNCACACGCAGCCGGGCTGCGGTACGGACCTCGGGGGCAGCTGTGCTCACGATCGTGCGCCCACGTTCTACGCCGAGTCGGTCCGCGCCNGCACGCCGTTCCGTGCGATGCGCTGCGCCGACCATGGGCANATACTGGCGGGCAGCTGTACCTCGTCCGGACCGGACGCTAACATGGGCGGGC]
[+] EMBL BX621355 [AGGTCGGATCTTGACCGAGTCCTTTCAGCCGACTGTACCATGCAGCTGTGCGCCGTAGTTTCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCACCTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCGGAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGTCTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCCATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAACAACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGACTTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCCCGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCGACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCGGCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACTTCTACCCGAACGGTGGNCACACGCAGCCGGGCTGCGGTACGGACCTCGGGGGCAGCTGTGCTCACGATCGTGCGCCCACGTTCTACGCCGAGTCGGTCCGCGCCNGCACGCCGTTCCGTGCGATGCGCTGCGCCGACCATGGGCANATACTGGCGGGCAGCTGTACCTCGTCCGGACCGGACGCTAACATGGGCGGGC]
consensusID : consensus_2671#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence
[CTGTGCGCCGTAGTTTCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCACCTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCGGAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGTCTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCCATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAACAACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGACTTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCCCGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCGACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCGGCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACACGATCATTGCGCTGGATCCGGCCGGGCCGCTGTTTGCGTTCGG]
[+] EMBL BX628662 [CTGTGCGCCGTAGTTTCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCACCTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCGGAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGTCTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCCATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAACAACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGACTTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCCCGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCGACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCGGCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACACGATCATTGCGCTGGATCCGGCCGGGCCGCTGTTTGCGTTCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2671#0 AGGTCGGATCTTGACCGAGTCCTTTCAGCCGACTGTACCATGCAGCTGTGCGCCGTAGTT 60
consensus_2671#1 ---------------------------------------------CTGTGCGCCGTAGTT 15
***************
consensus_2671#0 TCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCAC 120
consensus_2671#1 TCCTTCCTTGTGGTGGGACTGATTGCCAGTGCCACTGCCATTGACGATCGCAACTGGCAC 75
************************************************************
consensus_2671#0 CTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCG 180
consensus_2671#1 CTGGTTCCCGATGGCAACGGTAGGCTGCATCTCGTCAACACCAACCCGTACGATCTGCCG 135
************************************************************
consensus_2671#0 GAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGT 240
consensus_2671#1 GAAACGGACGCCGGCACCGCCGCACCACGGTTCGTGCCCCAGCAGGACATGATTTTCCGT 195
************************************************************
consensus_2671#0 CTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCC 300
consensus_2671#1 CTGTTCACGCGGGCCAATCCGACGCAACCGCAGATACTGCAGCTCAACAATGCCGCCTCC 255
************************************************************
consensus_2671#0 ATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAAC 360
consensus_2671#1 ATTACCGGCTCGAACTTCAACCCGGCCCACCCGACGCGCTTCACCATTCACGGCTGGAAC 315
************************************************************
consensus_2671#0 AACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGAC 420
consensus_2671#1 AACGACGGGTCGCACTTCATGAACCCGCTGATCCGGGATGCGTTCTTCGAGCGGGGCGAC 375
************************************************************
consensus_2671#0 TTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCC 480
consensus_2671#1 TTTAACGTGATCACCGTCGACTGGGGCGTGGGTGCGATCAACCCGAACTACATCGCGTCC 435
************************************************************
consensus_2671#0 CGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCG 540
consensus_2671#1 CGCAACTTGGTCGGACCGGTGGGCAACACCGTCTCGCTGCTGATCGATCAGCTGATCGCG 495
************************************************************
consensus_2671#0 ACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCG 600
consensus_2671#1 ACCGCCGGCGCCAACCCGGACAACATCTACATCATCGGCTACAGCCTGGGTGCGCACGCG 555
************************************************************
consensus_2671#0 GCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACTTCTACCCGAACGGTGGNCAC 660
consensus_2671#1 GCCGCTAACGCCGGCAAGGCACAGAACGGGCGCATCAACA-CGATCATTGCGCTGGATCC 614
*************************************** * * * ** *** *
consensus_2671#0 ACGCAGCCGGGCTGCGGTACGGACCTCGGGGGCAGCTGTGCTCACGATCGTGCGCCCACG 720
consensus_2671#1 G----GCCGGGCCGCTGTTTGCGT-TCGG------------------------------- 638
******* ** ** * ****
consensus_2671#0 TTCTACGCCGAGTCGGTCCGCGCCNGCACGCCGTTCCGTGCGATGCGCTGCGCCGACCAT 780
consensus_2671#1 ------------------------------------------------------------
consensus_2671#0 GGGCANATACTGGCGGGCAGCTGTACCTCGTCCGGACCGGACGCTAACATGGGCGGGC 838
consensus_2671#1 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||