cluster # 2672

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Anopheles gambiae
cluster # 2672 cluster # 2672 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2672#0 length = 707 sequences # 1

consensus_2672#1 length = 535 sequences # 1

consensusID : consensus_2672#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 707
fasta sequence

                              [CCGAAACATCTCCATATCAGCAAAAACGCAAATACCCTTTTCGGAATAATTCACACTGCAAGTGTGACGCTCGTTTGTGGTGTGTGTGTGCTCCAAGTGCAGTAAAATTATTCTGTGAAAGGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAAAATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAAAGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGGAGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATCAATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTCAACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAACCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGGTAAGAATTAGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACATCTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGTCAGATGAGAAATATATTTCATCGTTAACCAACAGAGCCAACAACATACGGACCGACCTGA]

[+] EMBL BM577266             [CCGAAACATCTCCATATCAGCAAAAACGCAAATACCCTTTTCGGAATAATTCACACTGCAAGTGTGACGCTCGTTTGTGGTGTGTGTGTGCTCCAAGTGCAGTAAAATTATTCTGTGAAAGGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAAAATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAAAGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGGAGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATCAATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTCAACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAACCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGGTAAGAATTAGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACATCTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGTCAGATGAGAAATATATTTCATCGTTAACCAACAGAGCCAACAACATACGGACCGACCTGA]




>consensus_2672#0
CCGAAACATCTCCATATCAGCAAAAACGCAAATACCCTTTTCGGAATAATTCACACTGCA
AGTGTGACGCTCGTTTGTGGTGTGTGTGTGCTCCAAGTGCAGTAAAATTATTCTGTGAAA
GGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAA
AATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAA
AGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGG
AGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATC
AATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTC
AACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAA
CCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGG
TAAGAATTAGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACAT
CTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGTCAGATGAGAAATA
TATTTCATCGTTAACCAACAGAGCCAACAACATACGGACCGACCTGA

consensusID : consensus_2672#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 535
fasta sequence

                              [CCGAAATTATTCTGTGAAAGGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAAAATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAAAGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGGAGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATCAATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTCAACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAACCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACATCTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGT]

[+] EMBL BM630681             [CCGAAATTATTCTGTGAAAGGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAAAATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAAAGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGGAGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATCAATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTCAACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAACCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACATCTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGT]




>consensus_2672#1
CCGAAATTATTCTGTGAAAGGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTG
CCGGTGTGCCGGAGGGGAAAATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTG
CAAAGTGAAGTGAGACGAAAGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAA
TATTAATCAGGCGTGGAGGAGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTG
CCGTGTAGTGGTGGAAATCAATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCA
CCAGCACCATATCGTCGTCAACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCC
GTATTGACGAGCCTTCGAACCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTA
TCTGAACGGAAGTGTTTGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAG
TGCAACATCTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2672#0      CCGAAACATCTCCATATCAGCAAAAACGCAAATACCCTTTTCGGAATAATTCACACTGCA 60
consensus_2672#1      ------------------------------------------------------------
                                                                                  

consensus_2672#0      AGTGTGACGCTCGTTTGTGGTGTGTGTGTGCTCCAAGTGCAGTAAAATTATTCTGTGAAA 120
consensus_2672#1      -----------------------------------------CCGAAATTATTCTGTGAAA 19
                                                                  ****************

consensus_2672#0      GGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAA 180
consensus_2672#1      GGTTTAGTGTAATTGGTGCAGCAAAGAAGCGATAGGCCGTGCCGGTGTGCCGGAGGGGAA 79
                      ************************************************************

consensus_2672#0      AATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAA 240
consensus_2672#1      AATAAACAAAAGTGTTTAGAAAATAATTTAACTTATGAGTGCAAAGTGAAGTGAGACGAA 139
                      ************************************************************

consensus_2672#0      AGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGG 300
consensus_2672#1      AGTTTTGTTGTCAAACAAGTGAAATAAGGTTTTGATAGCAATATTAATCAGGCGTGGAGG 199
                      ************************************************************

consensus_2672#0      AGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATC 360
consensus_2672#1      AGGCATTAACGTGTACGCGGGAGTGTGTCAAATCGTTCGTGCCGTGTAGTGGTGGAAATC 259
                      ************************************************************

consensus_2672#0      AATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTC 420
consensus_2672#1      AATTGTGCAAAAGAAATCACCGCCAACGTGGATTACTAGCACCAGCACCATATCGTCGTC 319
                      ************************************************************

consensus_2672#0      AACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAA 480
consensus_2672#1      AACTGGTGTCGGGTAACCGCTTTCTGCTACCGTATCCAGCCGTATTGACGAGCCTTCGAA 379
                      ************************************************************

consensus_2672#0      CCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTGG 540
consensus_2672#1      CCTACACCCCGAAAAGATAAATTGAACGATTTCAATCAGTATCTGAACGGAAGTGTTTG- 438
                      *********************************************************** 

consensus_2672#0      TAAGAATTAGAACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACAT 600
consensus_2672#1      ----------AACTTATCTTTTCCATGAACATTAAAGTCAAGCACGGTGCAGTGCAACAT 488
                                **************************************************

consensus_2672#0      CTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGTCAGATGAGAAATA 660
consensus_2672#1      CTAGCAGAGCGTTTAACGTCGTTGTTGGACACGATGATGCTACTCGT------------- 535
                      ***********************************************             

consensus_2672#0      TATTTCATCGTTAACCAACAGAGCCAACAACATACGGACCGACCTGA 707
consensus_2672#1      -----------------------------------------------