cluster # 2703

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Anopheles gambiae
cluster # 2703 cluster # 2703 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2703#0 length = 249 sequences # 1

consensus_2703#1 length = 225 sequences # 1

consensusID : consensus_2703#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence

                              [ATATCGGTTTTGTGGTGTATGTGTTTTTATGATTCGCCCTGGTTATTGTTCCATCCTCTTGCTGCTGCTGTCGACACATGTTTTCTACCTCTACTTTGTTCGATTAGCTAAGAGCGAAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCATCTCTGGTGGGAAATAACTATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACCTCTCTCTCTCT]

[+] EMBL CNS08FBL             [ATATCGGTTTTGTGGTGTATGTGTTTTTATGATTCGCCCTGGTTATTGTTCCATCCTCTTGCTGCTGCTGTCGACACATGTTTTCTACCTCTACTTTGTTCGATTAGCTAAGAGCGAAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCATCTCTGGTGGGAAATAACTATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACCTCTCTCTCTCT]




>consensus_2703#0
ATATCGGTTTTGTGGTGTATGTGTTTTTATGATTCGCCCTGGTTATTGTTCCATCCTCTT
GCTGCTGCTGTCGACACATGTTTTCTACCTCTACTTTGTTCGATTAGCTAAGAGCGAAGG
TATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCAT
CTCTGGTGGGAAATAACTATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACCTC
TCTCTCTCT

consensusID : consensus_2703#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence

                              [TGTTGTTTATGATTCCCCCTGGTTATTGTTCCTTCCTCTTGCTGCTGCTGTCGACGCATGTCGTTTTCTCCCTCTACTTTGTTCGATTAGCTAAGAGCGAAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCATCTCTGGTGGGAAATATCTATCCTCTCTCTCTCTGTTTCTCTTGCTGTCTACCGCTGTTTGTC]

[-] EMBL BX608214             [TGTTGTTTATGATTCCCCCTGGTTATTGTTCCTTCCTCTTGCTGCTGCTGTCGACGCATGTCGTTTTCTCCCTCTACTTTGTTCGATTAGCTAAGAGCGAAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCATCTCTGGTGGGAAATATCTATCCTCTCTCTCTCTGTTTCTCTTGCTGTCTACCGCTGTTTGTC]




>consensus_2703#1
TGTTGTTTATGATTCCCCCTGGTTATTGTTCCTTCCTCTTGCTGCTGCTGTCGACGCATG
TCGTTTTCTCCCTCTACTTTGTTCGATTAGCTAAGAGCGAAGGTATTCGCTACAAACTCA
TATCCTACACACAACGTCCCTCTACTAGATCCACCGGTTTCATCTCTGGTGGGAAATATC
TATCCTCTCTCTCTCTGTTTCTCTTGCTGTCTACCGCTGTTTGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2703#0      ATATCGGTTTTGTGGTGTATGTGTT-TTTATGATTCGCCCTGGTTATTGTTCCATCCTCT 59
consensus_2703#1      ---------------------TGTTGTTTATGATTCCCCCTGGTTATTGTTCCTTCCTCT 39
                                           **** ********** **************** ******

consensus_2703#0      TGCTGCTGCTGTCGACACATGT---TTTCTACCTCTACTTTGTTCGATTAGCTAAGAGCG 116
consensus_2703#1      TGCTGCTGCTGTCGACGCATGTCGTTTTCTCCCTCTACTTTGTTCGATTAGCTAAGAGCG 99
                      **************** *****   ***** *****************************

consensus_2703#0      AAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTT 176
consensus_2703#1      AAGGTATTCGCTACAAACTCATATCCTACACACAACGTCCCTCTACTAGATCCACCGGTT 159
                      ************************************************************

consensus_2703#0      TCATCTCTGGTGGGAAATAACTATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCA 236
consensus_2703#1      TCATCTCTGGTGGGAAATATCTATCCTCTCTCTCTCTGTTTCTCTTGCTGTCTACCGCTG 219
                      ******************* ***************** * *****  ** ***  * *  

consensus_2703#0      CCTCTCTCTCTCT 249
consensus_2703#1      TTTGTC------- 225
                        * **