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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 811 fasta sequence
[AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCATTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCTGTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAAATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAGAAACTGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACACAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTTGTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTATTATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCCCAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAATGTATCCGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAATGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAACAGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNNCACANNNACTGCAACGCGTGGACCANACNCCNG]
[+] EMBL AL931779 [AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCATTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCTGTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAAATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAGAAACTGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACACAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTTGTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTATTATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCCCAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAATGTATCCGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAATGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAACAGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNNCACANNNACTGCAACGCGTGGACCANACNCCNG]
consensusID : consensus_2738#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence
[TCCAACCGTGCAAGCGTGCTGGCCGAGTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGCTTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAACACCTTTTTTTCTTAGTTTGATTGGAAAGGGGAAACAAATGAAACGAAAGCACTTAAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGACAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATAGCTCATTTACTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAAGTCTAGAGCGGAGAGCCGAGAGCCACAGAACAGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAACGCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG]
[+] EMBL BX611671 [TCCAACCGTGCAAGCGTGCTGGCCGAGTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGCTTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAACACCTTTTTTTCTTAGTTTGATTGGAAAGGGGAAACAAATGAAACGAAAGCACTTAAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGACAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATAGCTCATTTACTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAAGTCTAGAGCGGAGAGCCGAGAGCCACAGAACAGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAACGCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2738#0 AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGA 60
consensus_2738#1 ------------------------------------------------------------
consensus_2738#0 AAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCA 120
consensus_2738#1 ------------------------------------------------------------
consensus_2738#0 TTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCT 180
consensus_2738#1 ---------------------------------------------------TCCAACCGT 9
* * *
consensus_2738#0 GTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAA 240
consensus_2738#1 GCAAGCGTGCTGGCCGA-GTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGC 68
* * *** * ** * * ** * *** * **** *
consensus_2738#0 ATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAG-AAAC 299
consensus_2738#1 TTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAAC 128
** *** ** * *** * ** ** *** * ** * * ****
consensus_2738#0 TGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACA 359
consensus_2738#1 ACCTTTTTTTCTTAGTTTGAT------TGGAAAGGGGAAACA---------AATGAAACG 173
* * * * **** * * ** ** * * ***** ** ****
consensus_2738#0 CAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTT 419
consensus_2738#1 AAAGCACTTAAGAAGCAGCA-GCTAATTTCTTA-ACCCCGAAAACGACAAGCCTATCAC- 230
** *** ** ** ** * * ** ** * * * * * ** * *
consensus_2738#0 GTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTAT 479
consensus_2738#1 GACCCGCTGCGTACGTGCCGGATGGAACAGT--TTATAGCTCATTTACTGTGAAAC---- 284
* **** * ** * ** * * * ***** * * * * * **
consensus_2738#0 TATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCC 539
consensus_2738#1 -AAAAGAACAAA-ACCATTTAAA-----TCAAATTATAA----AGTCTAGAGCGGAGAGC 333
* * ** ** ** * *** **** ** ** * * * * *
consensus_2738#0 CAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAAT 599
consensus_2738#1 CGAGAGCCACAGAAC--AGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAAC 391
* * * * * * * * * * ** * **** * * * ** **
consensus_2738#0 GTATC-CGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAA 658
consensus_2738#1 GCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG- 450
* * ***** * * * * ** * * ** ** * *** **
consensus_2738#0 TGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAAC 718
consensus_2738#1 ------------------------------------------------------------
consensus_2738#0 AGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNN 778
consensus_2738#1 ------------------------------------------------------------
consensus_2738#0 CACANNNACTGCAACGCGTGGACCANACNCCNG 811
consensus_2738#1 ---------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||