These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2752#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [CCGCCCACGCGTCCGGCAATTTGTAAATAGATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTTCGGTATCCCGTTGCTGGCAGTATAAAGATAAAACGTTGTAGGTTTGCCAGTAATTGGCAATGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGTTCCGAATCCGAACTTCGGGAAGACGTGCCCAACGATAACCCAGAGACCTACTGTCGATTGTGTTTCTCCGAAACCAATGTTCATCCGCTCTTCCCACAGAACGGGGGACTGATACGTGAAATGACCGAAAAGATACGGACCTGCGCCGGTATACATATTAGTGTGCGGGACGACTATCCAGCCGGACTATGTTTTGCGTGCCTGTCGATATTAGATGAGATTCATCAGTTTCAACAACGAAGTAAACATTGTGACGAAATCATTCGTACCAAGCGCGGTCTGCTGGAGCAGATTACAGTGAAAGTAGAAATGACGGAAGAAGATGGTGTACATTTTATCCCCCCTGGCGGAGGAAGCTGCACCGGCCTAGGAGCTAGTGAAGACTACGCAAATGATGATTGTCTTTACGGAGAGCAGTA] [+] EMBL BM639104 [CCGCCCACGCGTCCGGCAATTTGTAAATAGATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTTCGGTATCCCGTTGCTGGCAGTATAAAGATAAAACGTTGTAGGTTTGCCAGTAATTGGCAATGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGTTCCGAATCCGAACTTCGGGAAGACGTGCCCAACGATAACCCAGAGACCTACTGTCGATTGTGTTTCTCCGAAACCAATGTTCATCCGCTCTTCCCACAGAACGGGGGACTGATACGTGAAATGACCGAAAAGATACGGACCTGCGCCGGTATACATATTAGTGTGCGGGACGACTATCCAGCCGGACTATGTTTTGCGTGCCTGTCGATATTAGATGAGATTCATCAGTTTCAACAACGAAGTAAACATTGTGACGAAATCATTCGTACCAAGCGCGGTCTGCTGGAGCAGATTACAGTGAAAGTAGAAATGACGGAAGAAGATGGTGTACATTTTATCCCCCCTGGCGGAGGAAGCTGCACCGGCCTAGGAGCTAGTGAAGACTACGCAAATGATGATTGTCTTTACGGAGAGCAGTA] consensusID : consensus_2752#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 269 fasta sequence [AGCAGAATCNCCAGAGNTGNATAACAATTATCGCTACTTAACATGCAATTTGTAAATAGATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTTCGGTATCCCGTTGCTGGCAGTATAAAGATTAAACGTTGTAGGTTTGCCAGTAATTGGCAATGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGTGTCCGAATCCGAACTTCGGGAAGACGTGCCCAAC] [+] EMBL BX466208 [AGCAGAATCNCCAGAGNTGNATAACAATTATCGCTACTTAACATGCAATTTGTAAATAGATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTTCGGTATCCCGTTGCTGGCAGTATAAAGATTAAACGTTGTAGGTTTGCCAGTAATTGGCAATGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGTGTCCGAATCCGAACTTCGGGAAGACGTGCCCAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2752#0 ------------------------------CCGCCCACGCGTCCGGCAATTTGTAAATAG 30 consensus_2752#1 AGCAGAATCNCCAGAGNTGNATAACAATTATCGCT-ACTTAACATGCAATTTGTAAATAG 59 *** ** * *************** consensus_2752#0 ATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTT 90 consensus_2752#1 ATAGTTTCTTATCGGATCTTTATCCCATAAATCCAAGGTTCTCGAAGAAAAAAACCTCTT 119 ************************************************************ consensus_2752#0 CGGTATCCCGTTGCTGGCAGTATAAAGATAAAACGTTGTAGGTTTGCCAGTAATTGGCAA 150 consensus_2752#1 CGGTATCCCGTTGCTGGCAGTATAAAGATTAAACGTTGTAGGTTTGCCAGTAATTGGCAA 179 ***************************** ****************************** consensus_2752#0 TGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGT-TCC 209 consensus_2752#1 TGTTCAGCAATATCGAAAAGTGCAATATGGAGCAGACAACGCAAACAAAAAACAGTGTCC 239 ******************************************************** *** consensus_2752#0 GAATCCGAACTTCGGGAAGACGTGCCCAACGATAACCCAGAGACCTACTGTCGATTGTGT 269 consensus_2752#1 GAATCCGAACTTCGGGAAGACGTGCCCAAC------------------------------ 269 ****************************** consensus_2752#0 TTCTCCGAAACCAATGTTCATCCGCTCTTCCCACAGAACGGGGGACTGATACGTGAAATG 329 consensus_2752#1 ------------------------------------------------------------ consensus_2752#0 ACCGAAAAGATACGGACCTGCGCCGGTATACATATTAGTGTGCGGGACGACTATCCAGCC 389 consensus_2752#1 ------------------------------------------------------------ consensus_2752#0 GGACTATGTTTTGCGTGCCTGTCGATATTAGATGAGATTCATCAGTTTCAACAACGAAGT 449 consensus_2752#1 ------------------------------------------------------------ consensus_2752#0 AAACATTGTGACGAAATCATTCGTACCAAGCGCGGTCTGCTGGAGCAGATTACAGTGAAA 509 consensus_2752#1 ------------------------------------------------------------ consensus_2752#0 GTAGAAATGACGGAAGAAGATGGTGTACATTTTATCCCCCCTGGCGGAGGAAGCTGCACC 569 consensus_2752#1 ------------------------------------------------------------ consensus_2752#0 GGCCTAGGAGCTAGTGAAGACTACGCAAATGATGATTGTCTTTACGGAGAGCAGTA 625 consensus_2752#1 -------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||