These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2811#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence [CCGCTTCGCGATGTTCTTCTCCGCGTTCTATCACGCGTGCGATTCGGGCGAGGAAGAGTTTAGCTTCTGTCTGGTGAAGATCGGCGTCCTGCAGTTTTGCGACTTCTACTGCGGGCTGCTCGCGATCTGGGTGACGCTGATCGCGATGTCCAACATTCGGCACCAGCTGGTGTCGCTGCTGCACATGCTCGGCGCGATCCTGCTCGCGTTCGGCACCGAGCTGAACAAGCAGTCGCTGTGGGTGTTTCTGGCGCCCGCCCTCACCGGCATCTGTCTCATCTCGGTCAGCTGGGGGCTGCGGTGCCGCAAGACGAAGCGCTGCTTCCCGGCCCGCAGCTACCTGGCCCTCTACCTGCCGATCGGCAGCGTGCTGGTGATGGTGGGCCTGGTCTGCTTCGCCTTTCTGCAGACCAAGCAGAACTATCACATCGTCCACTCGATCTGGCACATGGTGATGGCGCTCAGCATTCTCTGCCTGCTGCCGGACCGCAAAACGTTCCACCCGAAGTGCTAGCATACGGTGCGCATCTACCTGCTCAACTCGGGCTCACCCTCCACCTCCACCCA] [+] EMBL BM655993 [CCGCTTCGCGATGTTCTTCTCCGCGTTCTATCACGCGTGCGATTCGGGCGAGGAAGAGTTTAGCTTCTGTCTGGTGAAGATCGGCGTCCTGCAGTTTTGCGACTTCTACTGCGGGCTGCTCGCGATCTGGGTGACGCTGATCGCGATGTCCAACATTCGGCACCAGCTGGTGTCGCTGCTGCACATGCTCGGCGCGATCCTGCTCGCGTTCGGCACCGAGCTGAACAAGCAGTCGCTGTGGGTGTTTCTGGCGCCCGCCCTCACCGGCATCTGTCTCATCTCGGTCAGCTGGGGGCTGCGGTGCCGCAAGACGAAGCGCTGCTTCCCGGCCCGCAGCTACCTGGCCCTCTACCTGCCGATCGGCAGCGTGCTGGTGATGGTGGGCCTGGTCTGCTTCGCCTTTCTGCAGACCAAGCAGAACTATCACATCGTCCACTCGATCTGGCACATGGTGATGGCGCTCAGCATTCTCTGCCTGCTGCCGGACCGCAAAACGTTCCACCCGAAGTGCTAGCATACGGTGCGCATCTACCTGCTCAACTCGGGCTCACCCTCCACCTCCACCCA] consensusID : consensus_2811#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 249 fasta sequence [CCGCGGACGCGTGGGCGCAAAACGTTCCACCCGAAGTGCTAGCATACGGTGCGCATCTACCTGCTCAACTCGGGCTCACCCTCCACCTCCACCCAGTCGTCGTCCGGCTCGATGTCGACGTCCTCGACGACGTCCTCCTGCTCGACCGTGGCGGCGGTGGCCGCCAGCACCACTACCAGCTCCGTCGCCACCACCGCCACCTCCACCACGGCTGTGATATCCCAGGCGTCTCCGGTGGCAGCGCCCTGC] [+] EMBL BM657346 [CCGCGGACGCGTGGGCGCAAAACGTTCCACCCGAAGTGCTAGCATACGGTGCGCATCTACCTGCTCAACTCGGGCTCACCCTCCACCTCCACCCAGTCGTCGTCCGGCTCGATGTCGACGTCCTCGACGACGTCCTCCTGCTCGACCGTGGCGGCGGTGGCCGCCAGCACCACTACCAGCTCCGTCGCCACCACCGCCACCTCCACCACGGCTGTGATATCCCAGGCGTCTCCGGTGGCAGCGCCCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2811#0 CCGCTTCGCGATGTTCTTCTCCGCGTTCTATCACGCGTGCGATTCGGGCGAGGAAGAGTT 60 consensus_2811#1 ------------------------------------------------------------ consensus_2811#0 TAGCTTCTGTCTGGTGAAGATCGGCGTCCTGCAGTTTTGCGACTTCTACTGCGGGCTGCT 120 consensus_2811#1 -----------------------------------------------------------C 1 consensus_2811#0 CGCGATCTGGGTGACGCTGATCGCGATGTCCAACATTCGGCACCAGCTGGTGTCGCTGCT 180 consensus_2811#1 CGCGGACGCGTGGGCGCAAAACGTTCCACCCGA-----AGTGCTAGCATACGGTGCGCAT 56 **** * * * *** * ** ** * * * *** * ** * consensus_2811#0 GCACATGCTCGGCGCGATCCTGCTCGCGTTCGGCACCGAGCTGAACAAGCAGTCGCTGTG 240 consensus_2811#1 CTACCTGCTCAACTCGGGCTCACCCTCCACCTCCACC------------CAGTCGTCGTC 104 ** ***** * ** * * * * * **** ****** ** consensus_2811#0 GGTGTTTCTGGCGCCCGCCCTCACCGGCATCTGTCTCATCTCGGTCAGCTGGGGGCTGCG 300 consensus_2811#1 CGGCTCGATGTCGAC-GTCCTCGACGACGTCCTCCT--GCTCGACCG--TGGCGGCGGTG 159 * * ** ** * * **** ** * ** ** **** * *** *** * * consensus_2811#0 GTGCCGCAAGACGAAGCGCTGCTTCCCGGCCCGCAGCTACCTGGCCCTCTACCTGCCGAT 360 consensus_2811#1 --GCCGCCAG------CACCACTACCAGCTCCGTCGCCACCA---CCGCCACCTCCACCA 208 ***** ** * * ** ** * *** ** *** ** * **** * consensus_2811#0 CGGCAGCGTGCTGGTGATGGTGGGCCTGGTCTGCTTCGCCTTTCTGCAGACCAAGCAGAA 420 consensus_2811#1 CGGC--TGTGATATCCCAGGCGTCTCCGGTG-GCAGCGCCCTGC---------------- 249 **** *** * ** * * *** ** **** * * consensus_2811#0 CTATCACATCGTCCACTCGATCTGGCACATGGTGATGGCGCTCAGCATTCTCTGCCTGCT 480 consensus_2811#1 ------------------------------------------------------------ consensus_2811#0 GCCGGACCGCAAAACGTTCCACCCGAAGTGCTAGCATACGGTGCGCATCTACCTGCTCAA 540 consensus_2811#1 ------------------------------------------------------------ consensus_2811#0 CTCGGGCTCACCCTCCACCTCCACCCA 567 consensus_2811#1 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||