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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_283#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[AGATCCCCACGNGTNAATTTTTCTTATTTTTTTTCACACNATCGGTTCAATTGTTTTGCTTTGTTTGTTTGTTATGTTTCTGTATGCCACGTTTACATACGTTTTACACCCTTTTCTTGCTTAACGTACACAACTTTCTTTGATTAACTTTTGTTTTGTTTTGTTTAGTTGCTTCTTCTTGCTTTCACACATTGCTTCCAATTGGTTTGTAATTGTTTTGGTTTCAGTTTACCTGCCCCCCATCTCCTACTTTAACTGCTTCAAGATTCCAATCGTGACGCTTTGTTTTTATTATTCTTTTTGGCCACAGTAATATTCAATCGACACATGGGAAGAAGATAACGATACGAACAAAAAACACCCGAAACCGAGACAAATGGAATCATCATCACAATTCGGTGGCGCTTCTTTGTAGCAAACACTACGAACAGGGGAAAAAAGCACATCATAAATCNGCACAAAAGCGCTACGGAAAAGTTCGCTNGACAAANTGAAANCGAAACCAAGCAAGCAAAAAACAGAAAACTTGAAACAACACTNNATGCACCCAACAGCAGCCCAGNACCTGGCTANGNGCTCGGAAGTAGCTCATGGGTAAGCCACACCTTACCAGACAGATACGCCCCGATACTCGAATAGGCGAATTAAACGCAGGCAAAAAAGCGACAAAGCAAACAGGGAACAATC]
[+] EMBL BX467243 [AGATCCCCACGNGTNAATTTTTCTTATTTTTTTTCACACNATCGGTTCAATTGTTTTGCTTTGTTTGTTTGTTATGTTTCTGTATGCCACGTTTACATACGTTTTACACCCTTTTCTTGCTTAACGTACACAACTTTCTTTGATTAACTTTTGTTTTGTTTTGTTTAGTTGCTTCTTCTTGCTTTCACACATTGCTTCCAATTGGTTTGTAATTGTTTTGGTTTCAGTTTACCTGCCCCCCATCTCCTACTTTAACTGCTTCAAGATTCCAATCGTGACGCTTTGTTTTTATTATTCTTTTTGGCCACAGTAATATTCAATCGACACATGGGAAGAAGATAACGATACGAACAAAAAACACCCGAAACCGAGACAAATGGAATCATCATCACAATTCGGTGGCGCTTCTTTGTAGCAAACACTACGAACAGGGGAAAAAAGCACATCATAAATCNGCACAAAAGCGCTACGGAAAAGTTCGCTNGACAAANTGAAANCGAAACCAAGCAAGCAAAAAACAGAAAACTTGAAACAACACTNNATGCACCCAACAGCAGCCCAGNACCTGGCTANGNGCTCGGAAGTAGCTCATGGGTAAGCCACACCTTACCAGACAGATACGCCCCGATACTCGAATAGGCGAATTAAACGCAGGCAAAAAAGCGACAAAGCAAACAGGGAACAATC]
consensusID : consensus_283#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence
[TCTATTCCTGATTTCCTCTTAAGCATTTTTTTGTTGTTTTTGTTGTTCACTCTTTCTTCTTGACTTCTTTCCCTTCCTAGTTTAGTGCGCATTGTTCAAGTTTGCCTTTTAGCGTTTTCACGTTTTTATTCTTTAGCACCGTATTTTTGTTGCTGTTTTTTTCTGTTTTCTTTGTTTTTTTTCCACCCTTCCGCCCCATTGTTTTGCTTTGTTTGTTTGTTTCTGTACGCCATGTTTGCATACGTTTTACACCCTTTTCTTGCTTCACGTACACCACTTTCTTTGGTTCACTTTTGTTTTGTTTTGTTTAGTTGCTTC]
[-] EMBL BX612309 [TCTATTCCTGATTTCCTCTTAAGCATTTTTTTGTTGTTTTTGTTGTTCACTCTTTCTTCTTGACTTCTTTCCCTTCCTAGTTTAGTGCGCATTGTTCAAGTTTGCCTTTTAGCGTTTTCACGTTTTTATTCTTTAGCACCGTATTTTTGTTGCTGTTTTTTTCTGTTTTCTTTGTTTTTTTTCCACCCTTCCGCCCCATTGTTTTGCTTTGTTTGTTTGTTTCTGTACGCCATGTTTGCATACGTTTTACACCCTTTTCTTGCTTCACGTACACCACTTTCTTTGGTTCACTTTTGTTTTGTTTTGTTTAGTTGCTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_283#0 ----------AGATCCCCACGNGTNAATTTTTCTTATTTTTTTT---CACACNATCGGTT 47
consensus_283#1 TCTATTCCTGATTTCCTCTTAAGCATTTTTTTGTTGTTTTTGTTGTTCACTCTTTCTTCT 60
* *** * * ***** ** ***** ** *** * ** *
consensus_283#0 CAATTGTTTTGCTTTGTTTGTTTGTTATGTTTCTGTATGCCACGTTTACATACGTTTTAC 107
consensus_283#1 TGACTTCTTTCCCTTCCTAGTTTAGTGCGCATTGTTCAAGTTTGCCTTTTAGCGTTTT-C 119
* * *** * ** * **** * * * * * * ****** *
consensus_283#0 ACCCTTTTCTTGCTTAACGTACACAACTTTCTTTGATTAACTTTTGTTTTGTTTTGTTTA 167
consensus_283#1 ACGTTTTTATTCTTTAGC--ACCGTATTTTTGTTGCTG---TTTTTTTCTGTTTTCTTT- 173
** **** ** *** * ** * *** *** * **** ** ****** ***
consensus_283#0 GTTGCTTCTTCTTGCTTTCACACATTGCTTCCAATTGGTTTGTAATTGTTTTGGTTTCA- 226
consensus_283#1 GTTTTTTTTCCACCCTTCCGCCCCATTGTTTTGCTTTGTTTGTTTGTTTCTGTACGCCAT 233
*** ** * * *** * * * * ** ** ****** * * * **
consensus_283#0 GTTTACCTGCCCCCCATCTCCTACTTTAACTGCTTCAAG-ATTCCAATCGTGACGCTTTG 285
consensus_283#1 GTTTGCATACGTTTTACACCCTTTTCT---TGCTTCACGTACACCACTTTCTTTGGTTCA 290
**** * * * * *** * * ******* * * *** * * **
consensus_283#0 TTTTTATT--ATTCTTTTTGGCCACAGTAATATTCAATCGACACATGGGAAGAAGATAAC 343
consensus_283#1 CTTTTGTTTTGTTTTGTTTAGTTGCTTC-------------------------------- 318
**** ** ** * *** * *
consensus_283#0 GATACGAACAAAAAACACCCGAAACCGAGACAAATGGAATCATCATCACAATTCGGTGGC 403
consensus_283#1 ------------------------------------------------------------
consensus_283#0 GCTTCTTTGTAGCAAACACTACGAACAGGGGAAAAAAGCACATCATAAATCNGCACAAAA 463
consensus_283#1 ------------------------------------------------------------
consensus_283#0 GCGCTACGGAAAAGTTCGCTNGACAAANTGAAANCGAAACCAAGCAAGCAAAAAACAGAA 523
consensus_283#1 ------------------------------------------------------------
consensus_283#0 AACTTGAAACAACACTNNATGCACCCAACAGCAGCCCAGNACCTGGCTANGNGCTCGGAA 583
consensus_283#1 ------------------------------------------------------------
consensus_283#0 GTAGCTCATGGGTAAGCCACACCTTACCAGACAGATACGCCCCGATACTCGAATAGGCGA 643
consensus_283#1 ------------------------------------------------------------
consensus_283#0 ATTAAACGCAGGCAAAAAAGCGACAAAGCAAACAGGGAACAATC 687
consensus_283#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||