These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2888#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 635 fasta sequence [CCGCCCACGCGTCCGACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGTCTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGAAGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTGTCATCGGTTGACTGCTGCTACCGGAAGCGAGTGGTTTAATTAAAAACAACACGTCCAGACATCAGAGACAGTTATTAGGGAGTGTTCGTGTGTGTGTGTGATAGCACAGTGCTCATTTATTCTATATCAAGTTCGAACCGAAGCTCACGAAGATGGGTGCGCCACCTGCCAAGAAGCCGCTGGTGAACAGGAATCTAATATCCTTGAAAATTGTGCTCTTCCTGTTCTACGGAGCCCTAGGATGTCTGCATCCGTACATCCAGAAGCACATGACCCTGACCGGGCTGAATTACTACGAGTCGCAGCTGGTGACGCTAATTGCTCCGCTGGTGGCAATTCTGGGTCCACTGATAATTGCCCCACTGGTCGATCGGTTGGCAGGACGGGCTGGTGCATCGTTCGGCAAACGGTTGCGCTTACTAGCCGCCCTCTGCATGATTCTGTC] [+] EMBL BM653797 [CCGCCCACGCGTCCGACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGTCTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGAAGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTGTCATCGGTTGACTGCTGCTACCGGAAGCGAGTGGTTTAATTAAAAACAACACGTCCAGACATCAGAGACAGTTATTAGGGAGTGTTCGTGTGTGTGTGTGATAGCACAGTGCTCATTTATTCTATATCAAGTTCGAACCGAAGCTCACGAAGATGGGTGCGCCACCTGCCAAGAAGCCGCTGGTGAACAGGAATCTAATATCCTTGAAAATTGTGCTCTTCCTGTTCTACGGAGCCCTAGGATGTCTGCATCCGTACATCCAGAAGCACATGACCCTGACCGGGCTGAATTACTACGAGTCGCAGCTGGTGACGCTAATTGCTCCGCTGGTGGCAATTCTGGGTCCACTGATAATTGCCCCACTGGTCGATCGGTTGGCAGGACGGGCTGGTGCATCGTTCGGCAAACGGTTGCGCTTACTAGCCGCCCTCTGCATGATTCTGTC] consensusID : consensus_2888#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 384 fasta sequence [CCGCCCACGCGTCCGTGCTATCAACACTGTTGCGCCACTTACTGTATAGGATACTGTGTGCAGTGTGTCCTAACGCCTGGAACGGCAGTCTCTGCAACTGGGAAGTGATTGGATCGTAAGGTGTCTTCCGGAGTGTAGGACCGTAGGACGAAGACGAGGACTCGCGCTTGGCGTTTTATTAGATTACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGTCTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGAAGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTGTCATCGGTTGACTGCTGCTACCGG] [+] EMBL BM640295 [CCGCCCACGCGTCCGTGCTATCAACACTGTTGCGCCACTTACTGTATAGGATACTGTGTGCAGTGTGTCCTAACGCCTGGAACGGCAGTCTCTGCAACTGGGAAGTGATTGGATCGTAAGGTGTCTTCCGGAGTGTAGGACCGTAGGACGAAGACGAGGACTCGCGCTTGGCGTTTTATTAGATTACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGTCTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGAAGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTGTCATCGGTTGACTGCTGCTACCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2888#0 ------------------------------------------------------------ consensus_2888#1 CCGCCCACGCGTCCGTGCTATCAACACTGTTGCGCCACTTACTGTATAGGATACTGTGTG 60 consensus_2888#0 ------------------------------------------------------------ consensus_2888#1 CAGTGTGTCCTAACGCCTGGAACGGCAGTCTCTGCAACTGGGAAGTGATTGGATCGTAAG 120 consensus_2888#0 --------------------------------------------------CCGCCCACGC 10 consensus_2888#1 GTGTCTTCCGGAGTGTAGGACCGTAGGACGAAGACGAGGACTCGCGCTTGGCGTTTTATT 180 ** consensus_2888#0 GTCCGACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGT 70 consensus_2888#1 AGATTACACGGACCACAAACTCCGGAGTGGCACACAACGACGTTAAAACCGTCTTTCAGT 240 ******************************************************* consensus_2888#0 CTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGA 130 consensus_2888#1 CTTCCCTATTCTGCCACTGTGCGTGTAGAATAGTGGACAGAACGAGCAGCGCAACCACGA 300 ************************************************************ consensus_2888#0 AGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTG 190 consensus_2888#1 AGACGACCTGCCCCGCGATGAAAATGGCCCAGGAGCGTCTTGATCGTTAGTGAAACTGTG 360 ************************************************************ consensus_2888#0 TCATCGGTTGACTGCTGCTACCGGAAGCGAGTGGTTTAATTAAAAACAACACGTCCAGAC 250 consensus_2888#1 TCATCGGTTGACTGCTGCTACCGG------------------------------------ 384 ************************ consensus_2888#0 ATCAGAGACAGTTATTAGGGAGTGTTCGTGTGTGTGTGTGATAGCACAGTGCTCATTTAT 310 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 TCTATATCAAGTTCGAACCGAAGCTCACGAAGATGGGTGCGCCACCTGCCAAGAAGCCGC 370 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 TGGTGAACAGGAATCTAATATCCTTGAAAATTGTGCTCTTCCTGTTCTACGGAGCCCTAG 430 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 GATGTCTGCATCCGTACATCCAGAAGCACATGACCCTGACCGGGCTGAATTACTACGAGT 490 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 CGCAGCTGGTGACGCTAATTGCTCCGCTGGTGGCAATTCTGGGTCCACTGATAATTGCCC 550 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 CACTGGTCGATCGGTTGGCAGGACGGGCTGGTGCATCGTTCGGCAAACGGTTGCGCTTAC 610 consensus_2888#1 ------------------------------------------------------------ consensus_2888#0 TAGCCGCCCTCTGCATGATTCTGTC 635 consensus_2888#1 ------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||