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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3311#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 698 fasta sequence
[CCGCGCACCCGGAACTATGGAAGCTCGCGGTCGCGCTCGCGATCGCGTAGCGACCGACGGCGGTCGCGGTCGGGCAGTTTCCGGCGCCGGTTCAGCCGATCGCGGTCCCGTTCGTTTAGCCGATCGCGCTCCGGCAGCTACTCGCGCAGCCGGTCCCGATCGCGCAGCTTCGAACGGCGCCGCTTCGATCGGCGATTCTATCGCGGTGGCCGCGGGGGAGGAGGCGGCGGCGGCGGCGGTGGCGGCGGATACGGTGGCGACCGGATGGGACCGTTCGGGGGCAATCGGTTCAACAATTCGCGCGGCCACTTACCGGCGCGGTGGATTCCGCGATTTCAGGGACAACCGGTTCGTGGGAGGTCCGCGCGGCGGTGGCGGCGGTATTGGGGTGGTGGTCGCGATAGGCCACCGTTCCGGCCGCGGTATCGCGGACGTTTCCAGCGCTCGTACAGTCGCAGCATGAGCAAATCGCCCGATCGGCGCCCGATCAGCCCGGGCGATGACCGTTCCCGCCACTACCAAGCGGCGCGGGGATAGCCGGGACAGGGGTACGGCCGGGCAGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGA-CCGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGTGACCATCGTCATCGGCGCTCGGAGGACCGTGACTCGTCCAA]
[+] EMBL BM634061 [CCGCGCACCCGGAACTATGGAAGCTCGCGGTCGCGCTCGCGATCGCGTAGCGACCGACGGCGGTCGCGGTCGGGCAGTTTCCGGCGCCGGTTCAGCCGATCGCGGTCCCGTTCGTTTAGCCGATCGCGCTCCGGCAGCTACTCGCGCAGCCGGTCCCGATCGCGCAGCTTCGAACGGCGCCGCTTCGATCGGCGATTCTATCGCGGTGGCCGCGGGGGAGGAGGCGGCGGCGGCGGCGGTGGCGGCGGATACGGTGGCGACCGGATGGGACCGTTCGGGGGCAATCGGTTCAACAATTCGCGCGGCCACTTACCGGCGCGGTGGATTCCGCGATTTCAGGGACAACCGGTTCGTGGGAGGTCCGCGCGGCGGTGGCGGCGGTATTGGGGTGGTGGTCGCGATAGGCCACCGTTCCGGCCGCGGTATCGCGGACGTTTCCAGCGCTCGTACAGTCGCAGCATGAGCAAATCGCCCGATCGGCGCCCGATCAGCCCGGGCGATGACCGTTCCCGCCACTACCAAGCGGCGCGGGGATAGCCGGGACAGGGGTACGGCCGGGCAGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGA CCGCCGCAGCCGGGCGGACAGTCGCGATAATCAGC ]
[+] EMBL BM624542 [ ccgcccaCGCGTCCGCGATCGCGTAGCGACCGACGGCGGTCGCGGTCGGGCGGTTTCCGGCGCCGGTTCAGCCGATCGCGGTCCCGTTCGTTTAGCCGATCGCGCTCCGGCAGCTACTCGCGCAGCCGGTCCCGATCGCGCAGCTTCGAACGGCGCCGCTTCGATCGGCGATTCTATCGCGGTGGCCGCGGGGGAGGAGGCGGCGGCGGCGGCGGTGGCGGCGGATACGGTGGCGACCGGATGGGACCGTTCGGGGGCAATCGGTTCAACAATTCGCGCGGCCAC TACCGGCGCGGTGGATTCCGCGATTTCAGGGACAACCGGTTCGTGGGAGGTCCGCGCGGCGGTGGCGGCGGTAT GGGTGGTGGTCGCGATAGGCCACCGTTCCGGCCGCGGTATCGCGGACGTTTCCAGCGCTCGTACAGTCGCAGCATGAGCAAATCGCCCGATCGGCGCCCGATCAGCCCGGGCGATGACCGTTCCCGCCACTACC AGCGGCGCGGGGATAGCCGGGACAGGGGTACGGCCGGGCAGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGACCCGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGTGACCATCGTCATCGGCGCTCGGAGGACCGTGACTCGTCCAA]
consensusID : consensus_3311#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence
[CCGCCCACGCTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGACCCGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGTGACCATCGTCATCGGCGCTCGGAGGACCGTGACTCGTCCAAGCGATCGAAGGACGATCACGCGGGCACGGCTGGCGGCGGCACCGGTGGTGGTGGTGCCGCTACCTCGGCCAGCGAGCGGCGGGACAGTTCGCCGGATTCCCCGCGCGCTGAAAAGTCGTCGCGCCAGCAGCGTCGCTCCTCTTCCGCCGGCAGCCAGCGGTCCAGCGGGTCGACTAAAATCCCGCACGACATTGAAGGGCGCTGGGCCGACGATACCGACGCGAAGGAGAGTGAGCAGAAGAGGCAGCGCCACGATAACGCAGAATCGGGCGGATCGCATTCCAATAGCGGTGGTGGTGGTGGAGGAGGTAGCGCTATCCCG]
[+] EMBL BM624615 [CCGCCCACGCTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGACCCGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGTGACCATCGTCATCGGCGCTCGGAGGACCGTGACTCGTCCAAGCGATCGAAGGACGATCACGCGGGCACGGCTGGCGGCGGCACCGGTGGTGGTGGTGCCGCTACCTCGGCCAGCGAGCGGCGGGACAGTTCGCCGGATTCCCCGCGCGCTGAAAAGTCGTCGCGCCAGCAGCGTCGCTCCTCTTCCGCCGGCAGCCAGCGGTCCAGCGGGTCGACTAAAATCCCGCACGACATTGAAGGGCGCTGGGCCGACGATACCGACGCGAAGGAGAGTGAGCAGAAGAGGCAGCGCCACGATAACGCAGAATCGGGCGGATCGCATTCCAATAGCGGTGGTGGTGGTGGAGGAGGTAGCGCTATCCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3311#0 CCGCGCACCCGGAACTATGGAAGCTCGCGGTCGCGCTCGCGATCGCGTAGCGACCGACGG 60
consensus_3311#1 ------------------------------------------------------------
consensus_3311#0 CGGTCGCGGTCGGGCAGTTTCCGGCGCCGGTTCAGCCGATCGCGGTCCCGTTCGTTTAGC 120
consensus_3311#1 --------------------------------CCGCCCACGCTCCGCCCACGCGTCCGCC 28
* *** * *** *** *
consensus_3311#0 CGATCGCGCTCCGGCAGCTACTCGCGCAGCCGGTCCCGATCGCGCAGCTTCGAACGGCGC 180
consensus_3311#1 CACGCGTCCGCCCACGCGTCCGCGGGGGGACAGTCGGGAGCGCTCTTCGCCG--CCGACC 86
* ** * ** * * * ** * * * *** ** *** * * ** * * *
consensus_3311#0 CGCTTCGATCGGCGATTCTATCGCGGTGGCCGCGGGGGAGGAGGCGGCGGCGGCGGCGGT 240
consensus_3311#1 CGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGT 146
*** * *** * ***** * * * * * * * * ** *** * **
consensus_3311#0 GGCGGCGGATACGGTGGCGACCGGATGGGACCGTT-CGGGGGCAATCGGTTCAACAAT-- 297
consensus_3311#1 GACCATCGTCAT--CGGCGCTCGGA--GGACCGTGACTCGTCCAAGCGATCGAAGGACGA 202
* * * * **** **** ******* * * *** ** * ** *
consensus_3311#0 TCGCGCGGCCACTTACCGGCGCGGTGGATTCCGCGATTTCAGGGACAACCGGTTCGTGGG 357
consensus_3311#1 TCACGCGGGCACG-GCTGGCG--GCGGCACCGGTGGT----GGTGGTGCCGCTACCTCG- 254
** ***** *** * **** * ** * * * * ** *** * * * *
consensus_3311#0 AGGTCCGCGCGGCGGTGGCGGCGGTATTGGGGTGGTGGTCGCGATAGGCCACCGTTCCGG 417
consensus_3311#1 --GCCAGCG-AGCGGCGGGACAGTTCGCCGGATTCCCCGCGCGCTGAAAAGTCGTCGCGC 311
* * *** **** ** * * ** * **** * *** **
consensus_3311#0 CCGCGGTATCGCGGACGTTTCCAGCGCTCGTACAGTCGCAGCATGAGCAAATCGCCCGAT 477
consensus_3311#1 CAGCAGCGTCGCTC-CTCTTCCGCCG-----GCAGCCAGCGGTCCAGCGGGTCGACTAA- 364
* ** * **** * **** ** *** * * *** *** * *
consensus_3311#0 CGGCGCCCGATCAGCCCGGGCGATGACCGTTCCCGCCACTACCAAGCGGCGCGGGGATAG 537
consensus_3311#1 --AATCCCGCACGACATTGAAGGGCGCTGGGCCGACGATACCGACGCGAAGGAGAGTGAG 422
**** * * * * * * ** * * * * *** * * * **
consensus_3311#0 CCGGGACAGGGGTACGGCCGGGCAGCGGGGGGACAGTCGGGAGCGCTCTTCGCCGCCGAC 597
consensus_3311#1 C--AGAAGAGGCAGCGCCACGATAACGCAGAATCGGGCGG-ATCGCATTCCAATAGCGGT 479
* ** ** ** * * * ** * * * *** * *** * * **
consensus_3311#0 CGCCGCAGCCGGGCGGACAGTCGCGATAATCAGCGCGATCGGGAGGACAGCCGCGACCGT 657
consensus_3311#1 GGTGGTGGTGGAGGAGGTAG---CGCTATCCCG--------------------------- 509
* * * * * * ** ** ** * *
consensus_3311#0 GACCATCGTCATCGGCGCTCGGAGGACCGTGACTCGTCCAA 698
consensus_3311#1 -----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||