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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[GAATTCCCCGAGGTTAACGAATGCAGTAAGTCGTTGGCAAAATAAAATGTCTTCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCGTTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAATTATGCACATGCAATAACGTTCAACGAAACGGGTGACCGGAAACTGCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGCCTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCTGCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTCGCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGTTGAATCTGACGAACGACATCAAACCGCCGAAATCCCTCTACATCGAGGTACGCTGCCTGACCGACTACGGAAAGTTTGAGCTGGAAAGTGGGGAAATAGTGCTGCTGAAGAAGAACAGTCAACCACTACCTACCGAAGCTGCAGTGCGAACAGCTGATCCGGCAGGGCATCCTGCAACACATTACATAGGGACAACGTANTNGTTCTGTTCTGGAATGTTTGAACACCTAGCACCATAAACC]
[+] EMBL AL694114 [GAATTCCCCGAGGTTAACGAATGCAGTAAGTCGTTGGCAAAATAAAATGTCTTCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCGTTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAATTATGCACATGCAATAACGTTCAACGAAACGGGTGACCGGAAACTGCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGCCTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCTGCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTCGCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGTTGAATCTGACGAACGACATCAAACCGCCGAAATCCCTCTACATCGAGGTACGCTGCCTGACCGACTACGGAAAGTTTGAGCTGGAAAGTGGGGAAATAGTGCTGCTGAAGAAGAACAGTCAACCACTACCTACCGAAGCTGCAGTGCGAACAGCTGATCCGGCAGGGCATCCTGCAACACATTACATAGGGACAACGTANTNGTTCTGTTCTGGAATGTTTGAACACCTAGCACCATAAACC]
consensusID : consensus_3796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 527 fasta sequence
[GTTCTTGTCCTAAAAGTGATCGGCCGAATGCAGTAAGTTCGTTGGCAAAATAAAATGTCGTCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCGTTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAATTATGCACATGCGTAAGAATTTACTTCACGGTAGCACCTTATTTTCTTCCCAATTGGCTCATACTCGCTTTCCACTGGCTCCAAACAGAATAACGTTCAACGAAACGGGTGACCGGAAACTGCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGCCTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCTGCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTCGCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGT]
[+] EMBL BX627707 [GTTCTTGTCCTAAAAGTGATCGGCCGAATGCAGTAAGTTCGTTGGCAAA ]
[+] EMBL BX622142 [gnTCTTGTCCTAAAAGTGATCGGCCGAATGCAGTAAGTTCGTTGGCAAAATAAAATGTCGTCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCGTTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAATTATGCACATGCGTAAGAATTTACTTCACGGTAGCACCTTATTTTCTTCCCAATTGGCTCATACTCGCTTTCCACTGGCTCCAAACAGAATAACGTTCAACGAAACGGGTGACCGGAAACTGCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGCCTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCTGCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTCGCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3796#0 --GAATTCCCCGAGGTTAA-----CGAATGCAGTAAGT-CGTTGGCAAAATAAAATGTCT 52
consensus_3796#1 GTTCTTGTCCTAAAAGTGATCGGCCGAATGCAGTAAGTTCGTTGGCAAAATAAAATGTCG 60
* ** * * * ************** ********************
consensus_3796#0 TCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCG 112
consensus_3796#1 TCGGATAAAGGATTCGATCTTATTAGAGAGTATGAAAGGTCAACTGATCCCATACCAGCG 120
************************************************************
consensus_3796#0 TTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAAT 172
consensus_3796#1 TTTAACGATGATGGCGTCCGTTCTGTGCTGGAGGACATTTCAAAGATCTATCAAGAAAAT 180
************************************************************
consensus_3796#0 TATGCACATGC------------------------------------------------- 183
consensus_3796#1 TATGCACATGCGTAAGAATTTACTTCACGGTAGCACCTTATTTTCTTCCCAATTGGCTCA 240
***********
consensus_3796#0 ---------------------------AATAACGTTCAACGAAACGGGTGACCGGAAACT 216
consensus_3796#1 TACTCGCTTTCCACTGGCTCCAAACAGAATAACGTTCAACGAAACGGGTGACCGGAAACT 300
*********************************
consensus_3796#0 GCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGC 276
consensus_3796#1 GCTTCCACTCGTCATGTACCGCCACAATCTCATCAAGCGCCAGAAACGATGCGTCCTGGC 360
************************************************************
consensus_3796#0 CTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCT 336
consensus_3796#1 CTACCTGTCCAATCGTCTGTTTCGTCTCAAACGGCTTCGCTGGCATGTCGGTCCAATCCT 420
************************************************************
consensus_3796#0 GCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTC 396
consensus_3796#1 GCCGCCCGAAATCAAATCCTGCATCAACGATCCGGAATCGGCGTGGTTCAACAAGTACTC 480
************************************************************
consensus_3796#0 GCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGTTGAATCTGACGAA 456
consensus_3796#1 GCGCATACTGGCCGAGTACATGGCCTCCATTCACGACGGGTACGGGT------------- 527
***********************************************
consensus_3796#0 CGACATCAAACCGCCGAAATCCCTCTACATCGAGGTACGCTGCCTGACCGACTACGGAAA 516
consensus_3796#1 ------------------------------------------------------------
consensus_3796#0 GTTTGAGCTGGAAAGTGGGGAAATAGTGCTGCTGAAGAAGAACAGTCAACCACTACCTAC 576
consensus_3796#1 ------------------------------------------------------------
consensus_3796#0 CGAAGCTGCAGTGCGAACAGCTGATCCGGCAGGGCATCCTGCAACACATTACATAGGGAC 636
consensus_3796#1 ------------------------------------------------------------
consensus_3796#0 AACGTANTNGTTCTGTTCTGGAATGTTTGAACACCTAGCACCATAAACC 685
consensus_3796#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||