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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3837#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1129 fasta sequence
[CCCCCGAGGTTTAAGGTGTTGTTTTGATCGGTATCAGCGCGGAGGAAAGGAAAATAAATAAAATTTTTGCAATACATTCCTCTGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGGCTTTATTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAGAAATATTGTTGGACAAAAATGTCCCCAAGTGCGGAATTCCCTTGTTTAGATAAGAGAGCGTACGCAGTGTGTTCCCCCGACAAGCTTCCCCTAAAAATGCTAGCCTCATTGGATGCGGGCAAAAGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGGAAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGGCCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAATATTACTCAGTACAGCCCAGCGGAAAGCCTAATCGTGGCGATCGTGATTCACGGCAGTTTACGTTCAGATATTCAACCGTAGTGTTGACGCTGAGTGAAATCGTGCACGGTGAAGCACTGCAGCAACAATGTTTCGTAAAATATGGAAATCCATTTCCTCCTTTTATCTGCTGTACGAACTCAACACCTGCATATACATGCTGGATCCTTGGGAAAAGCGCTTTGTCAATGCGTTCATATTTGCCATTTTAGGGCTGCTGATCTTCTCGAGCTACACGTTCCTGCCGGGATACACGCGGAAATTGGTTAACGCATTCCTTCCTGCCCATTCCGCCCTGTCCGATCTCGACATGGACCATCAGCGATCGATGGAGTTCAACATACACTGACGATAGAGGGGTTGTGATGCCATCGGAGGACCCTTTGTGATACCGCAAATCAAGGGCCAATGGAGGGAACATTGAACGCACCGACGAACCTTGCCAATGTGCAGAGCACAAACAATCGGAGCACCGCTAACTAGACAAGCTTAACTCTAATGTTACAAACAAATTCGATACAATTGTAGTCAGAAGCTGTGTTAATTTTGGTTTGAATGCCCTTACTTTCGATTGCTTTTGAGCGTTAGTTAGAAATAGTGATGCAAAATCTT]
[+] EMBL AL694703 [CCCCCGAGGTTTAAGGTGTTGTTTTGATCGGTATCAGCGCGGAGGAAAGGAAAATAAATAAAATTTTTGCAATACATTCCTCTGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGGCTTTATTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAGAAATATTGTTGGACAAAAATGTCCCCAAGTGCGGAATTCCCTTGTTTAGATAAGAGAGCGTACGCAGTGTGTTCCCCCGACAAGCTTCCCCTAAAAATGCTAGCCTCATTGGATGCGGGCAAAAGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGGAAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGGCCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAATATTACTCAGTACAGCCCAGCGGAAAGCCTAATCGTGGCGATCG ]
[+] EMBL BX608526 [ TTACGAAATAATATTACTCAGTACAGCCCAGCGGAAAGCCTAATCGTGGCGATCGTGATTCACGGCAGTTTACGTTCAGATATTCAACCGTAGTGTTGACGCTGAGTGAAATCGTGCACGGTGAAGCACTGCAGCAACAATGTTTCGTAAAATATGGAAATCCATTTCCTCCTTTTATCTGCTGTACGAACTCAACACCTGCATATACATGCTGGATCCTTGGGAAAAGCGCTTTGTCAATGCGTTCATATTTGCCATTTTAGGGCTGCTGATCTTCTCGAGCTACACGTTCCTGCCGGGATACACGCGGAAATTGGTTAACGCATTCCTTCCTGCCCATTCCGCCCTGTCCGATCTCGACATGGACCATCAGCGATCGATGGAGTTCAACATACACTGACGATAGAGGGGTTGTGATGCCATCGGAGGACCCTTTGTGATACCGCAAATCAAGGGCCAATGGAGGGAACATTGAACGCACCGACGAACCTTGCCAATGTGCAGAGCACAAACAATCGGAGCACCGCTAACTAGACAAGCTTAACTCTAATGTTACAAACAAATTCGATACAATTGTAGTCAGAAGCTGTGTTAATTTTGGTTTGAATGCCCTTACTTTCGATTGCTTTTGAGCGTTAGTTAGAAATAGTGATGCAAAATCTT]
consensusID : consensus_3837#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence
[AGATCCCCGAGGTAAAATCTTTGCATACATTCCTGGTGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGGCTTTCTTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAAAAATGTTGTTGGACAAAAATGTCCCCAATTGCGGAATTCCCTTTGTTTAGATAAGAGAGCGTACGCAGTGTGTTCCCCCGACAAGTTTCCCCTAAAAATGCTAACCTCATTGGATGCGGGCAAAAGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGGAAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGGCCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAATATTACTCAGTATAGCCCAGC]
[+] EMBL AL932695 [AGATCCCCGAGGTAAAATCTTTGCATACATTCCTGGTGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGGCTTTCTTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAAAAATGTTGTTGGACAAAAATGTCCCCAATTGCGGAATTCCCTTTGTTTAGATAAGAGAGCGTACGCAGTGTGTTCCCCCGACAAGTTTCCCCTAAAAATGCTAACCTCATTGGATGCGGGCAAAAGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGGAAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGGCCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAATATTACTCAGTATAGCCCAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3837#0 CCCCCGAGGTTTAAGGTGTTGTTTTGATCGGTATCAGCGCGGAGGAAAGGAAAATAAATA 60
consensus_3837#1 ----------------------------------------------AGATCCCCGAGGTA 14
* * **
consensus_3837#0 AAATTTTTGCAATACATTCCTC-TGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGG 119
consensus_3837#1 AAATCTTTGCA-TACATTCCTGGTGCTGTATCGTGCGAAATTATTCCACGCTTTTGCAGG 73
**** ****** ********* *************************************
consensus_3837#0 CTTTATTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAGAAAT 179
consensus_3837#1 CTTTCTTGTGAATCAAATCAAACATTTACTATTTTTGTGATTTTGTGCGTGAGTAAAAAT 133
**** ************************************************** ****
consensus_3837#0 ATTGTTGGACAAAAATGTCCCCAAGTGCGGAATTCCCTT-GTTTAGATAAGAGAGCGTAC 238
consensus_3837#1 GTTGTTGGACAAAAATGTCCCCAATTGCGGAATTCCCTTTGTTTAGATAAGAGAGCGTAC 193
*********************** ************** ********************
consensus_3837#0 GCAGTGTGTTCCCCCGACAAGCTTCCCCTAAAAATGCTAGCCTCATTGGATGCGGGCAAA 298
consensus_3837#1 GCAGTGTGTTCCCCCGACAAGTTTCCCCTAAAAATGCTAACCTCATTGGATGCGGGCAAA 253
********************* ***************** ********************
consensus_3837#0 AGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGG 358
consensus_3837#1 AGTTAGCGCTGAGTAAGGCTGTTATCAATAGCTACGCAATCTCAATACATTGGATATCGG 313
************************************************************
consensus_3837#0 AAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGG 418
consensus_3837#1 AAAGTCACCCCCGAAAACTAAAGACACCTGCGAAAAAGAGGCAACCGACAACATATACGG 373
************************************************************
consensus_3837#0 CCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAAT 478
consensus_3837#1 CCAATTGGTGTACGCTTGGTATTGATAAGGGAGTAGTCCCTCGGCTGATTACGAAATAAT 433
************************************************************
consensus_3837#0 ATTACTCAGTACAGCCCAGCGGAAAGCCTAATCGTGGCGATCGTGATTCACGGCAGTTTA 538
consensus_3837#1 ATTACTCAGTATAGCCCAGC---------------------------------------- 453
*********** ********
consensus_3837#0 CGTTCAGATATTCAACCGTAGTGTTGACGCTGAGTGAAATCGTGCACGGTGAAGCACTGC 598
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 AGCAACAATGTTTCGTAAAATATGGAAATCCATTTCCTCCTTTTATCTGCTGTACGAACT 658
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 CAACACCTGCATATACATGCTGGATCCTTGGGAAAAGCGCTTTGTCAATGCGTTCATATT 718
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 TGCCATTTTAGGGCTGCTGATCTTCTCGAGCTACACGTTCCTGCCGGGATACACGCGGAA 778
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 ATTGGTTAACGCATTCCTTCCTGCCCATTCCGCCCTGTCCGATCTCGACATGGACCATCA 838
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 GCGATCGATGGAGTTCAACATACACTGACGATAGAGGGGTTGTGATGCCATCGGAGGACC 898
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 CTTTGTGATACCGCAAATCAAGGGCCAATGGAGGGAACATTGAACGCACCGACGAACCTT 958
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 GCCAATGTGCAGAGCACAAACAATCGGAGCACCGCTAACTAGACAAGCTTAACTCTAATG 1018
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 TTACAAACAAATTCGATACAATTGTAGTCAGAAGCTGTGTTAATTTTGGTTTGAATGCCC 1078
consensus_3837#1 ------------------------------------------------------------
consensus_3837#0 TTACTTTCGATTGCTTTTGAGCGTTAGTTAGAAATAGTGATGCAAAATCTT 1129
consensus_3837#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||