These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4132#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1062 fasta sequence [CGACATCCGTGACACGAGCCTGGGCTACCATGCGAACCTCTGCAGCATGGCATTCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCCGCCGTAGTCAGGNGTGCGGCGTGAACGGTGTCACCTATCGGAGCGAATGTGAAGCGTGGAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCCCACGCTCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGTAATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGGTTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTGAGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGGGATAGAACACACCAAAAGCGTTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAGTTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTGATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGCTTAGCATAATTCATCACTCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG] [+] EMBL BX620386 [CGACATCCGTGACACGAGCCTGGGCTACCATGCGAACCTCTGCAGCATGGCATTCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCCGCCGTAGTCAGGNGTGCGGCGTGAACGGTGTCACCTATCGGAGCGAATGTGAAGCGTGGAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCCCACGCTCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGTAATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTG ] [+] EMBL BX614803 [ AATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGTGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGGTTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTGAGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGGGATAGAACACACCAAAAGCGTTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAGTTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTGATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGCTTAGCATAATTCATCACTCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG] consensusID : consensus_4132#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1036 fasta sequence [GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGATGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTGGTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGCTGGGAAGCTGGAACTGGCTCTGTGACACTGGTGCTGCACTGCAGAGCCATCTGGATCACTGAGCTGAGCTGAACCTGAGCTGCACTAACTGGTGTGCTGACACTTGGTGACCTGAACCTGAGCTGTGTGCCAGTCGCTATGTACAGTAGTGGTAATAGCAGGTTTNAGTATTGTAAAACGATNAGTAAACGCTATCTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCCGCCGGACTGGTGAGCTCTNAGTTGAAATTCGGCACCTGGTTTGCCCAAAACCTTAAAGGGTGGTTGGTAACGGGGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTACTTTGGCAAACCAACAACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACTTGGAAAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCGCGACGGNAGTTAGCCGGTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCGGACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGATCCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCACGGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGAGTTCATAACACGGGCATATATCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGACCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA] [+] EMBL AL932086 [GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGATGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTGGTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGCTGGGAAGCTGGAACTGGCTCTGTGACACTGGTGCTGCACTGCAGAGCCATCTGGATCACTGAGCTGAGCTGAACCTGAGCTGCACTAACTGGTGTGCTGACACTTGGTGACCTGAACCTGAGCTGTGTGCCAGTCGCTATGTACAGTAGTGGTAATAGCAGGTTTNAGTATTGTAAAACGATNAGTAAACGCTATCTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCCGCCGGACTGGTGAGCTCTNAGTTGAAATTCGGCACCTGGTTTGCCCAAAACCTTAAAGGGTGGTTGGTAACGGGGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTACTTTGGCAAACCAACAACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACTTGGAAAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCGCGACGGNAGTTAGCCGGTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCGGACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGATCCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCACGGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGAGTTCATAACACGGGCATATATCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGACCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4132#0 ---CGACATCCGTGACACGAGCCTGGGCTACCATGCGAAC-CTCTGCAGCATGG---CAT 53 consensus_4132#1 GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAG 60 ** * * *** * * ** * * ** *** * ** consensus_4132#0 TCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCC 113 consensus_4132#1 TCGACGGAGTATCTTACGC---TCAAGTCGA-TCTTACGCTCCCTGGAAGCGCTCCTGCA 116 **** *** ** ***** *** * * * * *** * *** ** consensus_4132#0 GCCGTAGTCAGGNGTGCGGCGTGAACGGT--GTCACCTATCGGAGCGAATGTGAAGCGTG 171 consensus_4132#1 G--ATGGTCGAATGT-CGGC-TGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTG 172 * * *** ** **** *** **** * * * *** ** * *** consensus_4132#0 GAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCC 231 consensus_4132#1 GTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGC 232 * ** * * * * * * * * * *** * ** * * * ** * consensus_4132#0 CACGC--TCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGT 289 consensus_4132#1 TGGGAAGCTGGAACTGGCTCTGTGACACTGGTGC-TGCACTGCAGAGCCATCTGGATCAC 291 * * * *** * * * * * * * ** * * * * consensus_4132#0 AATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTG 349 consensus_4132#1 TGAGCTGAGCTGA-ACCTGAGCTGCACTAACTGGTGTGCTG----ACACTTGGTGACCTG 346 * * **** *** * ** * ******* * * ** * * ** consensus_4132#0 TACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTG--AAGGGTCAGTCGACGGAGT 407 consensus_4132#1 AACCTGAGCTG-TGTGCCAGTCGCTATGTACA-GTAGTGGTAATAGCAGGTTTNAGTATT 404 ** * ** * *** * * * * ** ** * ** * * * consensus_4132#0 ATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTC 467 consensus_4132#1 GTAAAACGATNA-GTAAACGCTAT-CTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCC 462 * *** * * ** * ** ** * * * ** * * * ** * consensus_4132#0 GGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGT--GCTGGAAACGTTGAG 525 consensus_4132#1 GCCGGACTGGTGAGCTCTNAGTTGAAA---TTCGGCACCTGGTTTGCCCAAAACCTTAAA 519 * * ** *** **** * ** * ** * * **** ** **** ** * consensus_4132#0 CCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGAC 585 consensus_4132#1 GGGTGGTTGGTAACGG--GGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTAC 577 * * ** ** * * * * * * * * ** ** consensus_4132#0 ACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGT 645 consensus_4132#1 TTTGGCAAACCAACA-ACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACT-TGGA 635 *** * ** * *** * ** * * ** * ** ** consensus_4132#0 GGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGG 705 consensus_4132#1 AAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCG-CGACGGNAG- 693 *** * *** ** *** * * * * * * * * * ** consensus_4132#0 TTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTG 765 consensus_4132#1 -TTAGCCG--GTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCG 750 **** * * * * * ** ** * * * *** * * consensus_4132#0 AGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGG-GAT 824 consensus_4132#1 GACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGAT 810 ** * * * * *** * * * ** * * * ** *** consensus_4132#0 AGAACACACCAAAAGCG-TTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAG 883 consensus_4132#1 CCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCAC 870 * * * * ** ** ****** ** * * * * consensus_4132#0 TTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTG 943 consensus_4132#1 GGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGA--GTTCATAACACGGGCATATA 928 ** * * * ** * * *** * * * * * consensus_4132#0 ATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGC 1003 consensus_4132#1 TCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGA 988 * ** * * * ** * * * * * ** * * * consensus_4132#0 TTAGCATAATTCATCAC-TCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG 1062 consensus_4132#1 CCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA------------ 1036 ** * ** * * ** ** ** * * ** ** ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||