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Anopheles gambiae
cluster # 4132 cluster # 4132       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4132#0 length = 1062 sequences # 2  
consensus_4132#1 length = 1036 sequences # 1  

consensusID : consensus_4132#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1062
fasta sequence
                              [CGACATCCGTGACACGAGCCTGGGCTACCATGCGAACCTCTGCAGCATGGCATTCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCCGCCGTAGTCAGGNGTGCGGCGTGAACGGTGTCACCTATCGGAGCGAATGTGAAGCGTGGAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCCCACGCTCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGTAATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGGTTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTGAGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGGGATAGAACACACCAAAAGCGTTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAGTTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTGATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGCTTAGCATAATTCATCACTCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG]

[+] EMBL BX620386             [CGACATCCGTGACACGAGCCTGGGCTACCATGCGAACCTCTGCAGCATGGCATTCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCCGCCGTAGTCAGGNGTGCGGCGTGAACGGTGTCACCTATCGGAGCGAATGTGAAGCGTGGAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCCCACGCTCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGTAATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX614803             [                                                                                                                                                                                                                                                                                                 AATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGTGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGGTTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTGAGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGGGATAGAACACACCAAAAGCGTTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAGTTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTGATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGCTTAGCATAATTCATCACTCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG]


>consensus_4132#0 CGACATCCGTGACACGAGCCTGGGCTACCATGCGAACCTCTGCAGCATGGCATTCGAACG AGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCCGCCGTAG TCAGGNGTGCGGCGTGAACGGTGTCACCTATCGGAGCGAATGTGAAGCGTGGAGCGATTA CTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCCCACGCTCGA TGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGTAATCCGGTGCT GCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTGTACTCGCGCAA ACAGATCGATCGTGGCCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAA GTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTCGGCTGAGCGGTCA GCTAACGTTCGAGAACGATCTGTATGTGGTGCTGGAAACGTTGAGCCGAAATCCGTCCCG CCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGACACTGGTGCGCACGCA GAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGTGGCGACACTGGTGAC CGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGGTTTAGTTGTAACGAT AGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTGAGTTTAGTGAATTCG CACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGGGATAGAACACACCAAAAGC GTTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAGTTCGTAGGTAGCGTAGG AGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTGATTCGTTCGTCGTTCGC CAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGCTTAGCATAATTCATCAC TCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG



consensusID : consensus_4132#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1036
fasta sequence
                              [GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGATGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTGGTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGCTGGGAAGCTGGAACTGGCTCTGTGACACTGGTGCTGCACTGCAGAGCCATCTGGATCACTGAGCTGAGCTGAACCTGAGCTGCACTAACTGGTGTGCTGACACTTGGTGACCTGAACCTGAGCTGTGTGCCAGTCGCTATGTACAGTAGTGGTAATAGCAGGTTTNAGTATTGTAAAACGATNAGTAAACGCTATCTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCCGCCGGACTGGTGAGCTCTNAGTTGAAATTCGGCACCTGGTTTGCCCAAAACCTTAAAGGGTGGTTGGTAACGGGGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTACTTTGGCAAACCAACAACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACTTGGAAAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCGCGACGGNAGTTAGCCGGTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCGGACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGATCCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCACGGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGAGTTCATAACACGGGCATATATCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGACCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA]

[+] EMBL AL932086             [GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAGTCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGATGGTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTGGTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGCTGGGAAGCTGGAACTGGCTCTGTGACACTGGTGCTGCACTGCAGAGCCATCTGGATCACTGAGCTGAGCTGAACCTGAGCTGCACTAACTGGTGTGCTGACACTTGGTGACCTGAACCTGAGCTGTGTGCCAGTCGCTATGTACAGTAGTGGTAATAGCAGGTTTNAGTATTGTAAAACGATNAGTAAACGCTATCTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCCGCCGGACTGGTGAGCTCTNAGTTGAAATTCGGCACCTGGTTTGCCCAAAACCTTAAAGGGTGGTTGGTAACGGGGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTACTTTGGCAAACCAACAACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACTTGGAAAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCGCGACGGNAGTTAGCCGGTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCGGACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGATCCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCACGGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGAGTTCATAACACGGGCATATATCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGACCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA]


>consensus_4132#1 GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAG TCGACGGAGTATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGATG GTCGAATGTCGGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTGGTGCTTGG AAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGCTGGGAAGC TGGAACTGGCTCTGTGACACTGGTGCTGCACTGCAGAGCCATCTGGATCACTGAGCTGAG CTGAACCTGAGCTGCACTAACTGGTGTGCTGACACTTGGTGACCTGAACCTGAGCTGTGT GCCAGTCGCTATGTACAGTAGTGGTAATAGCAGGTTTNAGTATTGTAAAACGATNAGTAA ACGCTATCTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCCGCCGGACTGGTGAGCTCT NAGTTGAAATTCGGCACCTGGTTTGCCCAAAACCTTAAAGGGTGGTTGGTAACGGGGGAC TTGGGGCGAACGNGGGACACACATTCCAAGGGGTTACTTTGGCAAACCAACAACCCAAAA AAAGNCGGTTNTGGGGTTCCCCAATACAACTTGGAAAGAACAAAGCCAACCAAAAAACTT TGTGGAATTTGGCTAAAGTCTTCGCGACGGNAGTTAGCCGGTAACGGAAGGTTACCTCGG TGTACATGGNCTTAATNAATCGNGGGGTCGGACCNCGTTTCTACAGCCATTTTAAATTTG AGCCCCNGGNGGTNTCGAANTTCCCCCGATCCCGGATGGTTATCCTGGNCTCAAAACACG GCTCAAAAAGACAGACANCAACANCACCACGGCGCAANGGACACGTCCATTNTGGGGTCT CNTAAAGAGTTCATAACACGGGCATATATCGGGAAAGTTTTCCANTCCAACATCCACGTC GCTTGGGNTAGAGTGGACTCGATTTGGACCCACACANCTCGGCGCATCANTTACAANCTT CTACAGCGTGACNTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4132#0      ---CGACATCCGTGACACGAGCCTGGGCTACCATGCGAAC-CTCTGCAGCATGG---CAT 53
consensus_4132#1      GCAAGAATTGCCTGAGGTTNAAACAGATTGATCTGTGGNCTCTACGCACTGAAGGGTCAG 60
                          **  * * ***          *  *    ** *  * **  ***     *   ** 

consensus_4132#0      TCGAACGAGCCTCGTACGCGTATCAGGAGAAGTACCGCAAGGTCTGCGAAACCTCGCGCC 113
consensus_4132#1      TCGACGGAGTATCTTACGC---TCAAGTCGA-TCTTACGCTCCCTGGAAGCGCTCCTGCA 116
                      ****  ***  ** *****   *** *   * *    *     ***  *   ***  ** 

consensus_4132#0      GCCGTAGTCAGGNGTGCGGCGTGAACGGT--GTCACCTATCGGAGCGAATGTGAAGCGTG 171
consensus_4132#1      G--ATGGTCGAATGT-CGGC-TGAGCGGTCAGCTAACGTTCGAGAACGATCTTGTATGTG 172
                      *   * ***    ** **** *** ****  *  * *  ***      ** *     ***

consensus_4132#0      GAGCGATTACTCCACCGTCGACTACAACGGACCGTGCCAGGAGGTGGGCCTGATCAGCCC 231
consensus_4132#1      GTGCTTGGAAACTGTTGATGTCGAAATCCTGTCCCGCCTGCAGACAGAAATTTTGTGCGC 232
                      * **    *  *    *  * * * * *    *  *** * **   *   *  *  ** *

consensus_4132#0      CACGC--TCGATGCCCGCTGCTCGTCGATCAAGTGTCCGCGGCGAAAGCTGACGAACTGT 289
consensus_4132#1      TGGGAAGCTGGAACTGGCTCTGTGACACTGGTGC-TGCACTGCAGAGCCATCTGGATCAC 291
                         *     *   *  ***    * *  *   *  * * * **  *  *    * *    

consensus_4132#0      AATCCGGTGCTGCCACCCGGTGCCTGCTGTCCGGTGTGCGGCACCGCCCTGCGCATCGTG 349
consensus_4132#1      TGAGCTGAGCTGA-ACCTGAGCTGCACTAACTGGTGTGCTG----ACACTTGGTGACCTG 346
                          * * ****  *** *       **  * ******* *     * **  *   * **

consensus_4132#0      TACTCGCGCAAACAGATCGATCGTGGCCTCTACGCACTG--AAGGGTCAGTCGACGGAGT 407
consensus_4132#1      AACCTGAGCTG-TGTGCCAGTCGCTATGTACA-GTAGTGGTAATAGCAGGTTTNAGTATT 404
                       **  * **        *  ***     *  * * * **  **  *   **    * * *

consensus_4132#0      ATCTTACGCTCAAGTCGATCTTACGCTCCCTGGAAGCGCTCCTGCAGACGGTCGAATGTC 467
consensus_4132#1      GTAAAACGATNA-GTAAACGCTAT-CTGGGTCGGGGTGCCACCATTCATTGGGCAAGTCC 462
                       *   *** * * **  *   **  **   * *  * **  *     *  *   **   *

consensus_4132#0      GGCTGAGCGGTCAGCTAACGTTCGAGAACGATCTGTATGTGGT--GCTGGAAACGTTGAG 525
consensus_4132#1      GCCGGACTGGTGAGCTCTNAGTTGAAA---TTCGGCACCTGGTTTGCCCAAAACCTTAAA 519
                      * * **  *** ****     * ** *    ** * *  ****  **   **** ** * 

consensus_4132#0      CCGAAATCCGTCCCGCCTGCAGACAGAAATTTGTGCGCGGGAAGCGGAACGGCTCGTGAC 585
consensus_4132#1      GGGTGGTTGGTAACGG--GGGACTTGGGGCGAACGNGGGACACACATTCCAAGGGGTTAC 577
                        *   *  **  **   *      *        * * *  *  *    *     ** **

consensus_4132#0      ACTGGTGCGCACGCAGAGCCATCGGATCACGAGCGAGCTGAACCTGAGCGCACTAACGGT 645
consensus_4132#1      TTTGGCAAACCAACA-ACCCAAAAAAAGNCGGTTNTGGGGTTCCCCAATACAACT-TGGA 635
                        ***    *   ** * ***    *   **     *  *  **  *   **     ** 

consensus_4132#0      GGCGACACTGGTGACCGAACCGAGCGGTGCCAGTCGCTTGTACAGTAGGGTAATAGCAGG 705
consensus_4132#1      AAGAACAAAGCCAACCAAAAAACTTTGTGGAATTTGGCTAAAGTCTTCG-CGACGGNAG- 693
                          ***  *   *** **       ***  * * *  *  *   *  *   *  * ** 

consensus_4132#0      TTTAGTTGTAACGATAGTAAGCTATCTGGTCGGTGCCACATCATGGCAGTCGCGACTGTG 765
consensus_4132#1      -TTAGCCG--GTAACGGAAGGTTACCTCGGTGTACATGGNCTTAATNAATCGNGGGGTCG 750
                       ****  *     *  * * * ** ** *  *               * *** *     *

consensus_4132#0      AGTTTAGTGAATTCGCACGTGCCAAACTAGGGTGTAGGGATGGGAGGGAAATCAGG-GAT 824
consensus_4132#1      GACCNCGTTTCTACAGCCATTTTAAATTTGAGCCCCNGGNGGTNTCGAANTTCCCCCGAT 810
                            **   * *   * *   *** * * *     **  *    * *  **    ***

consensus_4132#0      AGAACACACCAAAAGCG-TTTGGTTCCATCACTGAAAAAGCCACCAAACTGTGATGCTAG 883
consensus_4132#1      CCCGGATGGTTATCCTGGNCTCAAAACACGGCTCAAAAAGACAGACANCAACANCACCAC 870
                           *     *    *   *     **   ** ****** **   * *       * * 

consensus_4132#0      TTCGTAGGTAGCGTAGGAGTACGGGAGCTAGACGGGGGACGTTAGCATTATGACCGGTTG 943
consensus_4132#1      GGCGCAANGGACACGTCCATTNTGGGGTCTCNTAAAGA--GTTCATAACACGGGCATATA 928
                        ** *     *       *   ** *         *   ***   *  * *  *   * 

consensus_4132#0      ATTCGTTCGTCGTTCGCCAAAGCAAAAAACAACAAGCAGCAATCATTGTCTAGTCTAAGC 1003
consensus_4132#1      TCGGGAAAGTTTTCCANTCCAACATCCACGTCGCTTGGGNTAGAGTGGACTCGATTTGGA 988
                          *   **  * *     * **   *          *  *   * * ** *  *  * 

consensus_4132#0      TTAGCATAATTCATCAC-TCGTTTGTAAGGAACGATGCCGCAACGCCATATAATTTAACG 1062
consensus_4132#1      CCCACACANCTCGGCGCATCANTTACAANCTTCTACAGCGTGACNTCA------------ 1036
                          ** *  **  * * **  **  **    * *   **  **  **            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)