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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 862 fasta sequence
[AACGATGCGTTCTATTGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTNGCTGGCAGTAGGCGGTACGCACTGTGGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCCCCATACGAAGTGCTGAAATCATCCGAGCCATGCTGTGAGCCTACTTGTGATGACGACTGTCTGCATGCGATCTGTCGCCGTGCACCGGATGCCGCGTCCGTACCTACGTGCGTATGTCGGCAGGGATACGTGCGCCACGATGGGTCCTGCATAAGGAAGGAATCGTGCCCTCCCCGAACCCCCGTAACCTACGATTCGTACCGTCCGCAGAAGAACCCATACTATCACCGCCCTACACCACGTCCTAACTCGGTGCCAAAATCTTGCGGTGCGAACGAACGGCTCACCCACTGTCGGCCAGCCTGCGAACCGACCTGCGAGAAGGACTGTACCGGGGTGAAACACCCCCAGGTGTGCCACCCGGAACCGTGCTGCGTGTGCAAGGAGGGCTACGTACGCCACAACGGTCGCTGCATCAAACGGTGCGACTGTCCGAAGCGACCGCCCTTCCTCTCCGGACGCCCCCTCTCGGGCGAGTACATTGATTTTGANGTCGTCTCGCTCGANGGTCTGAAATCGGACGAAGACTTTGGCTACAAACCGAAGGCCGAGTTCCGCATGCAGAAACCATCACCACCACGGCTGCCGGCGTACGAGCACAAAAAGTCACTCGGTATGGCACCGCTGTACCTGCGTACGCTCGGTAGCGCATCAAACTCGGNCCAAGCGTCATCCTACGAGCGCGCTGCCCATACGACCGAACGACCAGCCCTCTATNCACCGCTGTGC]
[+] EMBL BX627348 [AACGATGCGTTCTATTGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTNGCTGGCAGTAGGCGGTACGCACTGTGGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCCCCATACGAAGTGCTGAAATCATCCGAGCCATGCTGTGAGCCTACTTGTGATGACGACTGTCTGCATGCGATCTGTCGCCGTGCACCGGATGCCGCGTCCGTACCTACGTGCGTATGTCGGCAGGGATACGTGCGCCACGATGGGTCCTGCATAAGGAAGGAATCGTGCCCTCCCCGAACCCCCGTAACCTACGATTCGTACCGTCCGCAGAAGAACCCATACTATCACCGCCCTACACCACGTCCTAACTCGGTGCCAAAATCTTGCGGTGCGAACGAACGGCTCACCCACTGTCGGCCAGCCTGCGAACCGACCTGCGAGAAGGACTGTACCGGGGTGAAACACCCCCAGGTGTGCCACCCGGAACCGTGCTGCGTGTGCAAGGAGGGCTACGTACGCCACAACGGTCGCTGCATCAAACGGTGCGACTGTCCGAAGCGACCGCCCTTCCTCTCCGGACGCCCCCTCTCGGGCGAGTACATTGATTTTGANGTCGTCTCGCTCGANGGTCTGAAATCGG ]
[+] EMBL BX621795 [ ggGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTTGCTGGCAGTAGGCGGTACGCACTGTGGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCCCCATACGAAGTGCTGAAATCATCCGAGCCATGCTGTGAGCCTACTTGTGATGACGACTGTCTGCATGCGATCTGTCGCCGTGCACCGGATGCCGCGTCCGTACCTACGTGCGTATGTCGGCAGGGATACGTGCGCCACGATGGGTCCTGCATAAGGAAGGAATCGTGCCCTCCCCGAACCCCCGTAACCTACGATTCGTACCGTCCGCAGAAGAACCCATACTATCACCGCCCTACACCACGTCCTAACTCGGTGCCAAAATCTTGCGGTGCGAACGAACGGCTCACCCACTGTCGGCCAGCCTGCGAACCGACCTGCGAGAAGGACTGTACCGGGGTGAAACACCCCCAGGTGTGCCACCCGGAACCGTGCTGCGTGTGCAAGGAGGGCTACGTACGCCACAACGGTCGCTGCATCAAACGGTGCGACTGTCCGAAGCGACCGCCCTTCCTCTCCGGACGCCCCCTCTCGGGCGAGTACATTGATTTTGAGGTCGTCTCGCTCGAGGGTCTGAAATCGGACGAAGACTTTGGCTACAAACCGAAGGCCGAGTTCCGCATGCAGAAACCATCACCACCACGGCTGCCGGCGTACGAGCACAAAAAGTCACTCGGTATGGCACCGCTGTACCTGCGTACGCTCGGTAGCGCATCAAACTCGGNCCAAGCGTCATCCTACGAGCGCGCTGCCCATACGACCGAACGACCAGCCCTCTATNCACCGCTGTGC]
consensusID : consensus_4282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 826 fasta sequence
[GCAGATTNGCCCCCAGGGTTTCCGTTCCGGACCCGATCCAGACGTAACGATGCGTTCTATTGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTTGCTGGCAGTAGTGCGGTACGCACTGTGTGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCCCCATACGAAGTGCTGAAATCATCCTGAGCCATGCTTGTGAGCCTACTTGTGATGACGACTGTCTTGCATGCGATCTTGTCGCCGTGCACCTGGATGCCTGCTGTCCTGTACCTACGTGCGTATGTCGGCAGGGATACGTGCTGCCACGATGGGTCCTGCATAAGTGAAGGAATCTGTGCCCTCCCCTGAACCCCTGTAACCTACGATTCTGTACCTGTCCTGCGAGAAGAACCATACTATCACCTGGCCTAACCACTGTCCTAACTCGGTGCCAAAATCTTGCTGGTTGCTGAACTGAACTGTGCTCACCCGACTTGTCTGTGCCCCAATGCCCTTGCTGGAAACCTGACCCTTGCCGACGACATGTGACTTGTACCTGTGTGTGTTGAAACAAGCTCCCAAGAGGTTGTTGCCACCCTTGTGGAAACCCTGTTGCTTGCTGTTGTTGCAACTGTGAAGTGGCCTTAACGAGNTAACAGCTCGAACCAAAACTGTGGTCCTGCCCTTGCGACTTCCAAAGAACCTGTGGTTGCCNGAACATTTGTTCCCCTGANAATGGCTGGAAGNCCCTGGCCCTNTTCACATTTCCGTTACCCCTGNGTAACNCTGGCACCCCCCCCATTCTTCGGNGAGGGCCGNAACGGTT]
[+] EMBL AL930309 [GCAGATTNGCCCCCAGGGTTTCCGTTCCGGACCCGATCCAGACGTAACGATGCGTTCTATTGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTTGCTGGCAGTAGTGCGGTACGCACTGTGTGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCCCCATACGAAGTGCTGAAATCATCCTGAGCCATGCTTGTGAGCCTACTTGTGATGACGACTGTCTTGCATGCGATCTTGTCGCCGTGCACCTGGATGCCTGCTGTCCTGTACCTACGTGCGTATGTCGGCAGGGATACGTGCTGCCACGATGGGTCCTGCATAAGTGAAGGAATCTGTGCCCTCCCCTGAACCCCTGTAACCTACGATTCTGTACCTGTCCTGCGAGAAGAACCATACTATCACCTGGCCTAACCACTGTCCTAACTCGGTGCCAAAATCTTGCTGGTTGCTGAACTGAACTGTGCTCACCCGACTTGTCTGTGCCCCAATGCCCTTGCTGGAAACCTGACCCTTGCCGACGACATGTGACTTGTACCTGTGTGTGTTGAAACAAGCTCCCAAGAGGTTGTTGCCACCCTTGTGGAAACCCTGTTGCTTGCTGTTGTTGCAACTGTGAAGTGGCCTTAACGAGNTAACAGCTCGAACCAAAACTGTGGTCCTGCCCTTGCGACTTCCAAAGAACCTGTGGTTGCCNGAACATTTGTTCCCCTGANAATGGCTGGAAGNCCCTGGCCCTNTTCACATTTCCGTTACCCCTGNGTAACNCTGGCACCCCCCCCATTCTTCGGNGAGGGCCGNAACGGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4282#0 ---------------------------------------------AACGATGCGTTCTAT 15
consensus_4282#1 GCAGATTNGCCCCCAGGGTTTCCGTTCCGGACCCGATCCAGACGTAACGATGCGTTCTAT 60
***************
consensus_4282#0 TGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTNGCTGGCAGTAG-GCG 74
consensus_4282#1 TGGAGTTACGCTCAGTGCTGCTGGGTGCAGTGCCATGCTGCTGTTGCTGGCAGTAGTGCG 120
******************************************** *********** ***
consensus_4282#0 GTACGCACTGTG-GAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCC 133
consensus_4282#1 GTACGCACTGTGTGAACTGCCAGTGTCAGCTATGCTGAACCCAACAAGAACGTCTGTTCC 180
************ ***********************************************
consensus_4282#0 CCATACGAAGTGCTGAAATCATCC-GAGCCATGCT-GTGAGCCTACTTGTGATGACGACT 191
consensus_4282#1 CCATACGAAGTGCTGAAATCATCCTGAGCCATGCTTGTGAGCCTACTTGTGATGACGACT 240
************************ ********** ************************
consensus_4282#0 GTCT-GCATGCGATCT-GTCGCCGTGCACC-GGATGCCG--CGTCC-GTACCTACGTGCG 245
consensus_4282#1 GTCTTGCATGCGATCTTGTCGCCGTGCACCTGGATGCCTGCTGTCCTGTACCTACGTGCG 300
**** *********** ************* ******* **** *************
consensus_4282#0 TATGTCGGCAGGGATACGTGC-GCCACGATGGGTCCTGCATAAG-GAAGGAATC-GTGCC 302
consensus_4282#1 TATGTCGGCAGGGATACGTGCTGCCACGATGGGTCCTGCATAAGTGAAGGAATCTGTGCC 360
********************* ********************** ********* *****
consensus_4282#0 CTCCCC-GAACCCCCGTAACCTACGATTC-GTACC-GTCC-GCAGAAGAACCCATACTAT 358
consensus_4282#1 CTCCCCTGAACCCCTGTAACCTACGATTCTGTACCTGTCCTGCGAGAAGAACCATACTAT 420
****** ******* ************** ***** **** ** * * *********
consensus_4282#0 CACCGCCCTACACCAC-GTCCTAACTCGGTGCCAAAATCTTGCGGTGCGAACGAACGGCT 417
consensus_4282#1 CACCTGGCCTAACCACTGTCCTAACTCGGTGCCAAAATCTTGCTGGTTGCTGAACTGAAC 480
**** * ***** ************************** * * * *
consensus_4282#0 CACCCACTGTCGGCCAGCCTGCGAACCGACCTGCGAGAAGGACTGTACCGGGGTGAAACA 477
consensus_4282#1 TGTGCTCACCCGACTTGTCTGTGCCCCAATGCCCTTGCTGGAA---ACC----TGACCCT 533
* * ** * * *** * ** * * * *** *** *** *
consensus_4282#0 CCCCCA-GGTGTGCCACCCGGAACCGTGCTGCGTGTGCAAGGAGGGCTACGTACGCCACA 536
consensus_4282#1 TGCCGACGACATGTGACTTGTACCTGTG-TGTGT-TGAAACAAGCTCCCAAGAGGTTGTT 591
** * * ** ** * * * *** ** ** ** ** ** * * *
consensus_4282#0 ACGGTCGCTGCATCAAACGGTGCGACTGTC--CGAAGCGACCGCCC--TTCCTCTCCGGA 592
consensus_4282#1 GCCACCCTTGTGGAAACCCTGTTGCTTGCTGTTGTTGCAACTGTGAAGTGGCCTTAACGA 651
* * ** ** * * ** * ** ** * * * * **
consensus_4282#0 CGCCCCCTCTCGGGCGAGTACATTGATTTTGANGTCGTCTCGCTCGANGG-TCTGAAATC 651
consensus_4282#1 GNTAACAGCTCGAACCAAAACTGTGGTCCTGCCCTTGCGACTTCCAAAGAACCTGTGGTT 711
* **** * * ** ** * ** * * * * * * *** *
consensus_4282#0 GGACGAAGACTTTGGCTACAAACCGAAGGCCG--AGTTCCGCATGCAGAAACCATCACCA 709
consensus_4282#1 GCCNGAACATTTGTTCCCCTGAN-AATGGCTGGAAGNCCCTGGCCCTNTTCACATTTCCG 770
* *** * ** * * * * *** * ** ** * *** **
consensus_4282#0 CCACGGCTGC-CGGCGTACGAGCACAAAAAGTCACTCGGTATGGCACCGCTGTACCTGCG 768
consensus_4282#1 TTACCCCTGNGTAACNCTGGCACCCCCCCCATTCTTCGGNGAGG-GCCGNAACGGTT--- 826
** *** * * * * * **** ** *** *
consensus_4282#0 TACGCTCGGTAGCGCATCAAACTCGGNCCAAGCGTCATCCTACGAGCGCGCTGCCCATAC 828
consensus_4282#1 ------------------------------------------------------------
consensus_4282#0 GACCGAACGACCAGCCCTCTATNCACCGCTGTGC 862
consensus_4282#1 ----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||