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Anopheles gambiae
cluster # 4332 cluster # 4332       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4332#0 length = 1302 sequences # 3  

consensusID : consensus_4332#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1302
fasta sequence
                              [ATCGCTACCCAAGGTAAAGAACGGCTACACTTCGATCGGTAACGTGAAAAACCCGCTCAACACGCGGCCCCGCGATATGATGGAAAGCTTCTGGCTGGGCGAAACGCTCAAGTACTTCTACCTGCTGTTCAGCGACGATCGGAACGAGATCGATCTCGACAAGTACGTGTTCAATTCCGAGGCTCATCTGCTTCCGATACGGGACGATTAATGGGCACGAAGCGACCGCTTACCGGTACAGTGGTAAACACGAGGTCGTGTTTTATCTATTTTTAACTAAGTTTACAAAAATGTCGCTGACAGACGGCGTTGTACGGCGATCAGTAAAGGGACAGCCTTCGCGAAAGAGGAAAACAGACTTCCCGAAGCAAACGATATTTATTAGTTAGTGAAAGATCT-CATTGCGATCCCTTTCAATACGTACTAGCAAAATGGGCGGGATTAAGTGTAAGTTTTGATTCTGTGTGTTGATATCCCCAGGCAAAGGATAGCACCTAACGAACTGCGGACGATTGAGAAGATCGATTGAGCGCTGTTGCTGACAGCTATTTCTGTGTAAATAAGTGTACGAGGATTTTAGATATCGAAACTAGCGTTTCATACGGCTGTAGTAGCCAAAGGGTCTTTGATCCTTGATTGAATATTACCAAAAATGCAGCCGGCGGCGATTAGAGCTACGCCGATTTGTACGCCTTGCACATACGAGAACACATTCCCGAGCACGTTTCTTTTTTCTTTTTGTTTCTCCAATTATTTCAAAACGTTTCCTCTCAACACCCGCACGCCCTTCTGTCTCCACTATTAGTCGTCCCGGTTTTTCCTCTTTCCTAGGGTTTCCTATAAGGGGGAAAAGT-AATGATAATATACTAGCGAATGGAAGTGGCATACCAGCGCCAATTTCACGTCGTA-AAATAATCGAAGGATTTAAAAACA-AAAACAAAATACTAGAGCTAGTGATAGGAATGATTCGGTTGATGATTCCTTACTCTCTTTCGTGTACACTGTTTTCTAGTCCCTCGGTGGTAATGTAGCAAAAGAAAGTTAAACTCAATGCAGAACCGAAAGCGGGAAGAGATAGAATGGATTCGGTCGAGACTTAGACACACAAATACAAACTCTTATAGATGGTTAAATGATACAATCATGA-TTTTTCCTTAAGATTAGCGGTTAAATATTATCTACTGTCTTAAATTAATGGTCTTGATCAGAATTTTAGAAAATGCGAATGAGTAAGAAAATGGATCGGAATAAACAATCGTTGTGACCCTGAGATTAAAAATTAAAACAAAAGGCAGGCATGTG]

[+] EMBL CNS08QFH             [ATCGCTACCCAAGGTAAAGAACGGCTACACTTCGATCGGTAACGTGAAAAACCCGCTCAACACGCGGCCCCGCGATATGATGGAAAGCTTCTGGCTGGGCGAAACGCTCAAGTACTTCTACCTGCTGTTCAGCGACGATCGGAACGAGATCGATCTCGACAAGTACGTGTTCAATTCCGAGGCTCATCTGCTTCCGATACGGGACGATTAATGGGCACGAAGCGACCGCTTACCGGTACAGTGGTAAACACGAGGTCGTGTTTTATCTATTTTTAACTAAGTTTACAAAAATGTCGCTGACAGACGGCGTTGTACGGCGATCAGTAAAGGGACAGCCTTCGCGAAAGAGGAAAACAGACTTCCCGAAGCAAACGATATTTATTAGTTAGTGAAAGATCT CATTGCGATCCCTTTCAATACGTACTAGCAAAATGGGCGGGATTAAGTGTAAGTTTTGATTCTGTGTGTTGATATCCCCAGGCAAAGGATAGCACCTAACGAACTGCGGACGATTGAGAAGATCGATTGAGCGCTGTTGCTGACAGCTATTTCTGTGTAAATAAGTGTACGAGGATTTTAGATATCGAAACTAGCGTTTCATACGGCTGTAGTAGCCAAAGGGTCTTTGATCCTTGATTGAATATTACCAAAAATGCAGCCGGCGGCGATTAGAGCTACGCCGATTTGTACGCCTTGCACATACGAGAACACATTCCCGAGCACGTTTCTTTTTTCTTTTTGTTTCTCCAATTATTTCAAAACGTTTCCTCTCAACACCCGCACGCCCTTCTGTCTCCACTATTAGTCGTCCCGGTTTTTCCTCTTTCCTAGGGTTTCCTATAAGGGGGAAAAGT AATGATAATATACTAGCGAATGGAAGTGGCATACCAGCGCCAATTTCACGTCGTA AAATAATCGAAGGATTTAAAAACA AAAACAAAATACTAGAGCTAGTGATAGGAATGATTCGGTTGATGATT CTTACTCTCTTTCGTGTACACTGTTTTCTAGTC                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08QFI             [                                                                                                                                                                                                                                                                                              AAAAATGTCGCTTACAGACGGCGTTGTACGGCGATCAGTAAAGGGACAGCCTTCGCGAAAGAGGAAAACAGACTTCCCGAAGCAAACGATATTTATTAGTTAGTGAAAGATCTACATTGCGATCCCTTTCAATACGTACTAGCAAAATGGGCGGGATTAAGTGTAAGTTTTGATTCTGTGTGTTGATATCCCCAGGCAAAGGATAGCACCTAACGAACTGCGGACGATTGAGAAGATCGATTGAGCGCTGTTGCTAACAGCTATTTCTGTGTAAATAAGTGTACGAGGATTTTAGATATCGAAACTAGCGTTTCATACGGCTGTAGTAGCCAAAGGGTCTTTGATCCTTGATTGAATATTACCAAAAATGCAGCCGGCGGCGATTAGAG TACGCCGATTTGTACGCCTTGGACATACGAGAACACATTCCCGAGCACGTTTCTTTTTTCTTTTTGTTTCTCCAATTATTTCAAAACGTTTCCTCTCAACACCCGCACGCCCTTCTGTCTCCACTATTAGTCGTCCCGGTTTTTCCTCTTTCCTAGGGTTTCCTATAAGGGGGAAAAGT AAAGATAATATACTAGCGAATGGAAGTGGCATACCAGCGCCAATTTCACGTCGTA AAATAATCGAAGGATTTAAAAACA AAAACAAAATACTAGAGCTAGTGATAGGAATGATTCGGTTGATGATTCCTTACTCTCTTTCGTGTACACTGTTTTCTAGTCCCTCGGTGGTAATGTAGCAAAAGAAAGTTAAACTCAATGCAGAACCGAAAGCGGGAAGAGATAGAATGGATTCGGTCGAGACTTAGACACACAAATACAAACTCTTATAGATGGTTAAATGATACAATCATGA TTTTTCCTTAAGATTAGCGGTTAAATATTATCTACTGTCTTAAATTAATGGTCTTGATCAGAATTTTAGAAAATGCGAATGAGTAAGAAAATGGATCGGAATAAACAATCGTTGT                                        ]
[-] EMBL BX466904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGGGGGAAAAGTCAATGATAATATACTAGCGAATGGAAGTGGCGTACCAGCGCCAGTTTCACGTCGTATAAATAATCGAAGGATTTAAAAACANAAAACAAAATACTAGAGCTAGTGATAGGAATGATTCGGTTGATGATTCCTTACTCTCTTTCGTGTACACTGTTTTCTAGTCCCTCGGTGGTAATGTAGCAAAAGAAAGTTAAACTCAATGAAGAACCGAAAGCGGGAAGAGATAGAATGGATTCGGTCGAGACTTAGACACACAAATACAAACTCTTATAGATGGTTAAATGATACAATCATGATTTTTTCCTTAAGATTAGCGGTTAAATATTATCTACTGTCTTAAATTAATGGTCTTGATCAGAATTTTAGGAAATGCGAATGAGTAAGAAAATGGATCGGAATAAACAATCGATATGACCCTGAGATTAAAAATTAAAACAAAAGGCAGGCATGTG]


>consensus_4332#0 ATCGCTACCCAAGGTAAAGAACGGCTACACTTCGATCGGTAACGTGAAAAACCCGCTCAA CACGCGGCCCCGCGATATGATGGAAAGCTTCTGGCTGGGCGAAACGCTCAAGTACTTCTA CCTGCTGTTCAGCGACGATCGGAACGAGATCGATCTCGACAAGTACGTGTTCAATTCCGA GGCTCATCTGCTTCCGATACGGGACGATTAATGGGCACGAAGCGACCGCTTACCGGTACA GTGGTAAACACGAGGTCGTGTTTTATCTATTTTTAACTAAGTTTACAAAAATGTCGCTGA CAGACGGCGTTGTACGGCGATCAGTAAAGGGACAGCCTTCGCGAAAGAGGAAAACAGACT TCCCGAAGCAAACGATATTTATTAGTTAGTGAAAGATCTCATTGCGATCCCTTTCAATAC GTACTAGCAAAATGGGCGGGATTAAGTGTAAGTTTTGATTCTGTGTGTTGATATCCCCAG GCAAAGGATAGCACCTAACGAACTGCGGACGATTGAGAAGATCGATTGAGCGCTGTTGCT GACAGCTATTTCTGTGTAAATAAGTGTACGAGGATTTTAGATATCGAAACTAGCGTTTCA TACGGCTGTAGTAGCCAAAGGGTCTTTGATCCTTGATTGAATATTACCAAAAATGCAGCC GGCGGCGATTAGAGCTACGCCGATTTGTACGCCTTGCACATACGAGAACACATTCCCGAG CACGTTTCTTTTTTCTTTTTGTTTCTCCAATTATTTCAAAACGTTTCCTCTCAACACCCG CACGCCCTTCTGTCTCCACTATTAGTCGTCCCGGTTTTTCCTCTTTCCTAGGGTTTCCTA TAAGGGGGAAAAGTAATGATAATATACTAGCGAATGGAAGTGGCATACCAGCGCCAATTT CACGTCGTAAAATAATCGAAGGATTTAAAAACAAAAACAAAATACTAGAGCTAGTGATAG GAATGATTCGGTTGATGATTCCTTACTCTCTTTCGTGTACACTGTTTTCTAGTCCCTCGG TGGTAATGTAGCAAAAGAAAGTTAAACTCAATGCAGAACCGAAAGCGGGAAGAGATAGAA TGGATTCGGTCGAGACTTAGACACACAAATACAAACTCTTATAGATGGTTAAATGATACA ATCATGATTTTTCCTTAAGATTAGCGGTTAAATATTATCTACTGTCTTAAATTAATGGTC TTGATCAGAATTTTAGAAAATGCGAATGAGTAAGAAAATGGATCGGAATAAACAATCGTT GTGACCCTGAGATTAAAAATTAAAACAAAAGGCAGGCATGTG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)