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Anopheles gambiae
cluster # 4686 cluster # 4686       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4686#0 length = 983 sequences # 2  
consensus_4686#1 length = 883 sequences # 1  

consensusID : consensus_4686#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 983
fasta sequence
                              [CGACACGTTGACGATACTGTTGGAGAACATTGCGCGCGTGATTGAGGTCAATCAGGCGATTATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGAGTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAGAAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACACTATCGCAAACCGTCCGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCAACACACAAATGCAGGAGCTGCTCAGCACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAGGAGGGCCAGCAGTGCTCCAGCATGCTGGACGACGTGTTCTTTATCGTGCGCAAGTGCATCCGCCGCTCGAACGGTACGCAGTCGCTCGATGGCGTCTGTGCGGTGATTAACAACGCTGCCAGCTGCCTGGAGGAAGACTACATGAAAGCGCTCAAAGCGCCACTGAAAGCNGGCTACCCGACCGGGTACATCGATCTCGCCCAGGCGTACAATGCATTCCAAAGTTCGATCCAGCAGGGCCGGCTGCAGACGAGCGATTCGGACCAGGCGCGCGGCCGGTTCATCGCTGCGCTGAACAATGCCGACATGTCGACCGAGTTTATCGAAACGCTCTGGAAGATGATGACCGAGGAGACGGAAATAACGTTCCCGGGCATGAGCGCACGGGAGAAGGAAAAGCTGGACAGCTGTCTGGGCG]

[+] EMBL BX602551             [CGACACGTTGACGATACTGTTGGAGAACATTGCGCGCGTGATTGAGGTCAATCAGGCGATTATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGAGTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAGAAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACACTATCGCAAACCGTCCGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCAACACACAAATGCAGGAGCTGCTCAGCACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX621741             [                                                                                                                                                                                                                                GATCGACGATGGGACACTATCGCAAACCGTCCGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAATTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCAACACACAAATGCAGGAGCTGCTCAGCACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAGGAGGGCCAGCAGTGCTCCAGCATGCTGGACGACGTGTTCTTTATCGTGCGCAAGTGCATCCGCCGCTCGAACGGTACGCAGTCGCTCGATGGCGTCTGTGCGGTGATTAACAACGCTGCCAGCTGCCTGGAGGAAGACTACATGAAAGCGCTCAAAGCGCCACTGAAAGCNGGCTACCCGACCGGGTACATCGATCTCGCCCAGGCGTACAATGCATTCCAAAGTTCGATCCAGCAGGGCCGGCTGCAGACGAGCGATTCGGACCAGGCGCGCGGCCGGTTCATCGCTGCGCTGAACAATGCCGACATGTCGACCGAGTTTATCGAAACGCTCTGGAAGATGATGACCGAGGAGACGGAAATAACGTTCCCGGGCATGAGCGCACGGGAGAAGGAAAAGCTGGACAGCTGTCTGGGCG]


>consensus_4686#0 CGACACGTTGACGATACTGTTGGAGAACATTGCGCGCGTGATTGAGGTCAATCAGGCGAT TATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGA GTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAG AAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACA CTATCGCAAACCGTCCGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATAT CGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGTT CATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACA AGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCAACACACAAATGCA GGAGCTGCTCAGCACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAA AGCGATCGGGCTGGACAAGCTCGAGGAGGGCCAGCAGTGCTCCAGCATGCTGGACGACGT GTTCTTTATCGTGCGCAAGTGCATCCGCCGCTCGAACGGTACGCAGTCGCTCGATGGCGT CTGTGCGGTGATTAACAACGCTGCCAGCTGCCTGGAGGAAGACTACATGAAAGCGCTCAA AGCGCCACTGAAAGCNGGCTACCCGACCGGGTACATCGATCTCGCCCAGGCGTACAATGC ATTCCAAAGTTCGATCCAGCAGGGCCGGCTGCAGACGAGCGATTCGGACCAGGCGCGCGG CCGGTTCATCGCTGCGCTGAACAATGCCGACATGTCGACCGAGTTTATCGAAACGCTCTG GAAGATGATGACCGAGGAGACGGAAATAACGTTCCCGGGCATGAGCGCACGGGAGAAGGA AAAGCTGGACAGCTGTCTGGGCG



consensusID : consensus_4686#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 883
fasta sequence
                              [GCAAGAATTCGGCACGAGGATCAGGCGATTATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGAGTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAGAAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACACTATCGCAAACCGTCCGGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCGAACACACAAATGCAGGAGCTGCTCAGCGACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAGGGAGGGCCAGCAGTGCTCCAGCATGCTGGACGACGTGTCCTTATCGGTGCGCAAAGTGCATCCGCCGGTTCGAAACGGTACGCCAGGTCGGCTCGGATGGACGTCCTGGTGCNGGTGGATTTAAACAANACGGCTTTAGCCAAGTTTGCACTTTGGAAGGGAAAGACTTACCATGAAAAGGGCGCCTCNAAAAGCGGCCCAACATTGGAAANAGGGCCGGGNTTAACCCCGAGAAGCCGGGGGTTACNCTTCGGAATTCTNACGGCCCAAGGCGCTTNACAGATGGGATTTCCCAAAAGGTTCGAATTCCCCAGNNAAGGGGACACGGATTGGAAGAGACANGAGA]

[+] EMBL BX467883             [GCAAGAATTCGGCACGAGGATCAGGCGATTATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGAGTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAGAAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACACTATCGCAAACCGTCCGGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCGAACACACAAATGCAGGAGCTGCTCAGCGACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAGGGAGGGCCAGCAGTGCTCCAGCATGCTGGACGACGTGTCCTTATCGGTGCGCAAAGTGCATCCGCCGGTTCGAAACGGTACGCCAGGTCGGCTCGGATGGACGTCCTGGTGCNGGTGGATTTAAACAANACGGCTTTAGCCAAGTTTGCACTTTGGAAGGGAAAGACTTACCATGAAAAGGGCGCCTCNAAAAGCGGCCCAACATTGGAAANAGGGCCGGGNTTAACCCCGAGAAGCCGGGGGTTACNCTTCGGAATTCTNACGGCCCAAGGCGCTTNACAGATGGGATTTCCCAAAAGGTTCGAATTCCCCAGNNAAGGGGACACGGATTGGAAGAGACANGAGA]


>consensus_4686#1 GCAAGAATTCGGCACGAGGATCAGGCGATTATAGAAAATTGCTACGGACCGGGCCGCCTG GTGCAGATTTGTCGCATACTGCAGCGGGAGTGCGACGACGAGGTGACCAAGTGTGTGCAG GAGTTTTGCCGCAACCGACAGACGGGCAGAAGGATTGCACAGATTAATGATTACATCAAG AATGCGGGCGGCGGATCGACGATGGGACACTATCGCAAACCGTCCGGGCGGTGGTGGCGG ATCGATCGATAAGCTAAATGCGAAAGATATCGATAGTTTGATCGGGGAGATCACGATCAT GCACTCGAGGGCGGAACTGTACGTGAAGTTCATCAAGCGAAGATGTGCTAACGATTTAGA GAAAAGTTCCCTCCCGGCGGAGGTCAAACAAGAGCGGCTGGCCGAACTGCAAACCCTTCT GCAAAAGTCACGCCTCGAACACACAAATGCAGGAGCTGCTCAGCGACCTACCTTCTGTTC GAGCGCTACTTCATGGAGGAAAGCGTGCTGAAAGCGATCGGGCTGGACAAGCTCGAGGGA GGGCCAGCAGTGCTCCAGCATGCTGGACGACGTGTCCTTATCGGTGCGCAAAGTGCATCC GCCGGTTCGAAACGGTACGCCAGGTCGGCTCGGATGGACGTCCTGGTGCNGGTGGATTTA AACAANACGGCTTTAGCCAAGTTTGCACTTTGGAAGGGAAAGACTTACCATGAAAAGGGC GCCTCNAAAAGCGGCCCAACATTGGAAANAGGGCCGGGNTTAACCCCGAGAAGCCGGGGG TTACNCTTCGGAATTCTNACGGCCCAAGGCGCTTNACAGATGGGATTTCCCAAAAGGTTC GAATTCCCCAGNNAAGGGGACACGGATTGGAAGAGACANGAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4686#0      CGACACGTTGACGATACTGTTGGAGAACATTGCGCGCGTGATTGAGGTCAATCAGGCGAT 60
consensus_4686#1      -------------------------------GCAAGAATTCGGCACGAGGATCAGGCGAT 29
                                                     **  *  *     * *   **********

consensus_4686#0      TATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGA 120
consensus_4686#1      TATAGAAAATTGCTACGGACCGGGCCGCCTGGTGCAGATTTGTCGCATACTGCAGCGGGA 89
                      ************************************************************

consensus_4686#0      GTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAG 180
consensus_4686#1      GTGCGACGACGAGGTGACCAAGTGTGTGCAGGAGTTTTGCCGCAACCGACAGACGGGCAG 149
                      ************************************************************

consensus_4686#0      AAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACA 240
consensus_4686#1      AAGGATTGCACAGATTAATGATTACATCAAGAATGCGGGCGGCGGATCGACGATGGGACA 209
                      ************************************************************

consensus_4686#0      CTATCGCAAACCGTCCGG-CGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATA 299
consensus_4686#1      CTATCGCAAACCGTCCGGGCGGTGGTGGCGGATCGATCGATAAGCTAAATGCGAAAGATA 269
                      ****************** *****************************************

consensus_4686#0      TCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGT 359
consensus_4686#1      TCGATAGTTTGATCGGGGAGATCACGATCATGCACTCGAGGGCGGAACTGTACGTGAAGT 329
                      ************************************************************

consensus_4686#0      TCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAAC 419
consensus_4686#1      TCATCAAGCGAAGATGTGCTAACGATTTAGAGAAAAGTTCCCTCCCGGCGGAGGTCAAAC 389
                      ************************************************************

consensus_4686#0      AAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTC-AACACACAAATG 478
consensus_4686#1      AAGAGCGGCTGGCCGAACTGCAAACCCTTCTGCAAAAGTCACGCCTCGAACACACAAATG 449
                      *********************************************** ************

consensus_4686#0      CAGGAGCTGCTCAGC-ACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCT 537
consensus_4686#1      CAGGAGCTGCTCAGCGACCTACCTTCTGTTCGAGCGCTACTTCATGGAGGAAAGCGTGCT 509
                      *************** ********************************************

consensus_4686#0      GAAAGCGATCGGGCTGGACAAGCTCGAGG-AGGGCCAGCAGTGCTCCAGCATGCTGGACG 596
consensus_4686#1      GAAAGCGATCGGGCTGGACAAGCTCGAGGGAGGGCCAGCAGTGCTCCAGCATGCTGGACG 569
                      ***************************** ******************************

consensus_4686#0      ACGTGTTCTTTATCGTGCGCAA-GTGCATCCGCCGCTCGAACGGTACGCAGTCGCTCGAT 655
consensus_4686#1      ACGTGTCCTTATCGGTGCGCAAAGTGCATCCGCCG--------GTTCGAAACGGTACGCC 621
                      ****** ***    ******** ************        ** ** *   *  **  

consensus_4686#0      GGCGTCTGTGCGGTGATTAACAACGCTGCCAGCTGCCTGGAGGAAGACTACATGAAAGCG 715
consensus_4686#1      AG-GTCGGCTCGGATGGACGTCCTGGTGCNGGTGGATTTAAACAANACGGCTTTAG---- 676
                       * *** *  ***           * ***  *  *  *  *  ** **  * * *     

consensus_4686#0      CTCAAAGCGCCACTGAAAGCNGGCTACCCGACCGGGTACATCGATCTCGCCCAGGCGTAC 775
consensus_4686#1      -CCAAGTTTGCACTTTGGAAGGGAAA---GACTTACCATGAAAAGGGCGCCT-----CNA 727
                        ***     ****       **  *   ***     *     *   ****         

consensus_4686#0      AATGCATTCCAAAGTTCGATCCAGCAGGGCCGGCTGCAGACGAGCGATTCGGACCAGGCG 835
consensus_4686#1      AAAGCGGCCCAACATTGGA---AANAGGGCCGGGNTTAACCCCGAGA----AGCCGGGGG 780
                      ** **   ****  ** **   *  ********    *  *  * **      ** ** *

consensus_4686#0      CGCGGCCGGTTCATCGCTGCGCTGAACAATGCCGACATGTCGACCGAGTTTATCGAAACG 895
consensus_4686#1      TT---ACNCTTCGGAATTCTNACGGCCCAAGGCGCTTNACAGATGGGATTTCCCAAAAGG 837
                            *  ***     *     *  * * * **       **  *  ***  * *** *

consensus_4686#0      CTCTGGAAGATGATGACCGAGGAGACGGAAATAACGTTCCCGGGCATGAGCGCACGGGAG 955
consensus_4686#1      TTC--GAATTCCCCAGNNAAGGGGACACGGATTGGAAG---AGACANGAGA--------- 883
                       **  ***           *** ***    **          * ** ***          

consensus_4686#0      AAGGAAAAGCTGGACAGCTGTCTGGGCG 983
consensus_4686#1      ----------------------------
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)