These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_47#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence [CCGGTAGCCGCTTTGTCACCACAAACAACCTCAAATTTACTACCAGCACCACCACCACCACCACCACTAGCAACAACAGCAGCAACCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTAAGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATACGCCACCCACCACAGTCCTTCACCAGCCCAGTACGAGAGATAAATCGGTGTGTGTATGTGTGTGGGGACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTCAGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTTCGCGCTGAGGATCATTCGCTTTGATTAGGTTTAACGCTATAAGTTTACACACATTAACACACACACGCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGCAAAGGTTAGTTTCACAAACAAGTCTGTGCGCGGTACAAATGCTGATAGCCAAGCGCTTGCGATCTTATTAGCGGCGGTTTAGTGTGAGGTTTTGAACTGATTTTCACGTCAAATGGCCATTATTTTTCAACTTTCTCTTATACTACTACTACTCAAGCCCATCCCCATACAATTATTTTTACATGGTTTGATTTTCGTTTCACTGTGTTATGG] [+] EMBL BM630377 [CCGGTAGCCGCTTTGTCACCACAAACAACCTCAAATTTACTACCAGCACCACCACCACCACCACCACTAGCAACAACAGCAGCAACCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTAAGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATACGCCACCCACCACAGTCCTTCACCAGCCCAGTACGAGAGATAAATCGGTGTGTGTATGTGTGTGGGGACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTCAGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTTCGCGCTGAGGATCATTCGCTTTGATTAGGTTTAACGCTATAAGTTTACACACATTAACACACACACGCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGCAAAGGTTAGTTTCACAAACAAGTCTGTGCGCGGTACAAATGCTGATAGCCAAGCGCTTGCGATCTTATTAGCGGCGGTTTAGTGTGAGGTTTTGAACTGATTTTCACGTCAAATGGCCATTATTTTTCAACTTTCTCTTATACTACTACTACTCAAGCCCATCCCCATACAATTATTTTTACATGGTTTGATTTTCGTTTCACTGTGTTATGG] consensusID : consensus_47#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTAAGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATACGCCACCCACCACAGTCCTTCATAAGCCCAGTACGAGAGATAAATCGGTGTGTGTTTGTGTGTGTGAACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTCAGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTTTCGCGCTGAGGATCATTCGCTCTAGCTTTGATTAGGTTTAACGCTATAAGTTTTACACACATTAACACACACACACGCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGCAAAGGTTAGTTTCACAAACAAGTTGTGCGCAGAACAAATGCTGATAGCCAAGCGCTTGCGATCTTATTATCGGTGGTTTAGT] [+] EMBL BM650045 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTAAGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATACGCCACCCACCACAGTCCTTCATAAGCCCAGTACGAGAGATAAATCGGTGTGTGTTTGTGTGTGTGAACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTCAGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTTTCGCGCTGAGGATCATTCGCTCTAGCTTTGATTAGGTTTAACGCTATAAGTTTTACACACATTAACACACACACACGCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGCAAAGGTTAGTTTCACAAACAAGTTGTGCGCAGAACAAATGCTGATAGCCAAGCGCTTGCGATCTTATTATCGGTGGTTTAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_47#0 CCGGTAGCCGCTTTGTCACCACAAACAACCTCAAATTTACTACCAGCACCACCACCACCA 60 consensus_47#1 ------------------------------------------------------------ consensus_47#0 CCACCACTAGCAACAACAGCAGCAACCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTA 120 consensus_47#1 CCGCC-CACGCGTCCGCCCACGCGTCCGGCGGGATCACTTGTCGTCCGGGGTCACAAGTA 59 ** ** * ** * * ** *********************************** consensus_47#0 AGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATAC 180 consensus_47#1 AGTCGTGAAAGTGTCACACGATGGGTGCATTCTTTGCCCGTTCGCTGCAGGAAAAAATAC 119 ************************************************************ consensus_47#0 GCCACCCACCACAGTCCTTCACCAGCCCAGTACGAGAGATAAATCGGTGTGTGTATGTGT 240 consensus_47#1 GCCACCCACCACAGTCCTTCATAAGCCCAGTACGAGAGATAAATCGGTGTGTGTTTGTGT 179 ********************* ******************************* ***** consensus_47#0 GTGGGGACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTC 300 consensus_47#1 GTGTGAACCGCCCCTGTATCTGTACAGCAAACCGGGCTGTACGACGCGCCGGTACGGTTC 239 *** * ****************************************************** consensus_47#0 AGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTT-CG 359 consensus_47#1 AGTAAGCGGAAAACGGCGGGCAACGTTAACAAGTCAGAACAAGTTAGCATATTAGTTTCG 299 ********************************************************* ** consensus_47#0 CGCTGAGGATCATTCGCT------TTGATTAGGTTTAACGCTATAAGTTT-ACACACATT 412 consensus_47#1 CGCTGAGGATCATTCGCTCTAGCTTTGATTAGGTTTAACGCTATAAGTTTTACACACATT 359 ****************** ************************** ********* consensus_47#0 AACACACACAC--GCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGC 470 consensus_47#1 AACACACACACACGCACAGGATATAGTACGATCGATCGTACATTTTGCGGTAGCTAAAGC 419 *********** *********************************************** consensus_47#0 AAAGGTTAGTTTCACAAACAAGTCTGTGCGCGGTACAAATGCTGATAGCCAAGCGCTTGC 530 consensus_47#1 AAAGGTTAGTTTCACAAACAAGT-TGTGCGCAGAACAAATGCTGATAGCCAAGCGCTTGC 478 *********************** ******* * ************************** consensus_47#0 GATCTTATTAGCGGCGGTTTAGTGTGAGGTTTTGAACTGATTTTCACGTCAAATGGCCAT 590 consensus_47#1 GATCTTATTATCGGTGGTTTAGT------------------------------------- 501 ********** *** ******** consensus_47#0 TATTTTTCAACTTTCTCTTATACTACTACTACTCAAGCCCATCCCCATACAATTATTTTT 650 consensus_47#1 ------------------------------------------------------------ consensus_47#0 ACATGGTTTGATTTTCGTTTCACTGTGTTATGG 683 consensus_47#1 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||