cluster # 4755

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Anopheles gambiae
cluster # 4755 cluster # 4755 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4755#0 length = 701 sequences # 2

consensus_4755#1 length = 691 sequences # 1

consensusID : consensus_4755#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 701
fasta sequence

                              [CCGCCCACGCGTCCGCTGCTACCGAAACAGAAACCAATCATGGAGCTAGTTGTGCAGGAAATGTGGAACTTTTGTCGATTTTGTTTAAGCCAGGACGAAGATCTTCTTATCCCGATCAGGAACGCACTGGACGAGCACGTCACCGTCGACAATATAGAACGATTCACGGGCATCGCTATCGAACCGGACGAAAACATTCACGATGCCATTTGTACCGATTGCTCCAACCGATTGTACACGTATGCTGTCTTCCGGCGGTCTTGCTTAAGGAACGATGCCTATTTACGTAAAATTTACCCACAAATGTGTGCTGATGACATACTGGATGAAGTAGATGCTGCAGCGGCTAATCACAGTACCGACCCGTGTGTTAACCGGAAGTTGGAAAGTGTCGTTCCGAAGGCATCCTCTTCCCAAGGGACGAGTGTGTCAGAAGAATATGAAGATGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCACCACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTTGGACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCAT]

[+] EMBL BM603571             [CCGCCCACGCGTCCGCTGCTACCGAAACAGAAACCAATCATGGAGCTAGTTGTGCAGGAAATGTGGAACTTTTGTCGATTTTGTTTAAGCCAGGACGAAGATCTTCTTATCCCGATCAGGAACGCACTGGACGAGCACGTCACCGTCGACAATATAGAACGATTCACGGGCATCGCTATCGAACCGGACGAAAACATTCACGATGCCATTTGTACCGATTGCTCCAACCGATTGTACACGTATGCTGTCTTCCGGCGGTCTTGCTTAAGGAACGATGCCTATTTACGTAAAATTTACCCACAAATGTGTGCTGATGACATACTGGATGAAGTAGATGCTGCAGCGGCTAATCACAGTACCGACCCGTGTGTTAACCGGAAGTTGGAAAGTGTCGTTCCGAAGGCATCCTCTTCCCAAGGGACGAGTGTGTCAGAAGAATATGAAGATGAAGAAGAAGAA GAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCACCACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTTGGACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCAT]
[+] EMBL AL930667             [                                                                                                                                                                                                                       gaATTGCTCCAACCGATTGTACACGTATGCTGTCTTCCGGCGGTCTTGCTTAAGGAACGATGCCTATTTACGTAAAATTTACCCACAAATGTGTGCTGATGACATACTCGATGAAGTAGATGCTGCAGCGGCTAATCACAGTAACGACCCGTGTGTTAACCGGAAGTTGGAAAGTGTCGTTCCGAAGGCATNCTCTTCCCAAGCGACGAGTGTGTCAGAAGAAGATGAAGAAGAAGAAGAGGAACGAA                                                                                                                                                                                                                                               ]




>consensus_4755#0
CCGCCCACGCGTCCGCTGCTACCGAAACAGAAACCAATCATGGAGCTAGTTGTGCAGGAA
ATGTGGAACTTTTGTCGATTTTGTTTAAGCCAGGACGAAGATCTTCTTATCCCGATCAGG
AACGCACTGGACGAGCACGTCACCGTCGACAATATAGAACGATTCACGGGCATCGCTATC
GAACCGGACGAAAACATTCACGATGCCATTTGTACCGATTGCTCCAACCGATTGTACACG
TATGCTGTCTTCCGGCGGTCTTGCTTAAGGAACGATGCCTATTTACGTAAAATTTACCCA
CAAATGTGTGCTGATGACATACTGGATGAAGTAGATGCTGCAGCGGCTAATCACAGTACC
GACCCGTGTGTTAACCGGAAGTTGGAAAGTGTCGTTCCGAAGGCATCCTCTTCCCAAGGG
ACGAGTGTGTCAGAAGAATATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAA
GAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCACC
ACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAAG
GATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTTG
GACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCAT

consensusID : consensus_4755#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence

                              [CCGCCCACGCGTCCGAGAATATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCACCACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTTGGACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCATAGCGGAAATGTACAACGCCATCATGCGCAAACCGCAACGAGCCTACACGCAGTCGAAAGTTGAGCAAGAGTACATTTCGAACGAAATGTACCACCTGCTGGACCTGTCGAAGTATCGGCGCCAGCGGTATCTGTGCGAAATGTGCGGGAAGATGGTGAGCGATATCGTGTCGCACATCGTCAGCCACAAGCAGGAGGCCCGGTACGCGTGTCCGCACTGTCCCGTCCGCATGACGCACTCGGCCAACATGATGCGGCACGTGCAGGCGGTACACGAGCGCAGGATAGTGAAGACGTGCAAACCATGCGGCAAAGGATTTACGCACAAAAATGGCTACGATTCGCATATGCTATCACACCACGGCATCGGGACGCAGCATGAGTGCAAAGTGTGCGGAAAGAAGTTCAAC]

[+] EMBL BM588355             [CCGCCCACGCGTCCGAGAATATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCACCACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTTGGACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCATAGCGGAAATGTACAACGCCATCATGCGCAAACCGCAACGAGCCTACACGCAGTCGAAAGTTGAGCAAGAGTACATTTCGAACGAAATGTACCACCTGCTGGACCTGTCGAAGTATCGGCGCCAGCGGTATCTGTGCGAAATGTGCGGGAAGATGGTGAGCGATATCGTGTCGCACATCGTCAGCCACAAGCAGGAGGCCCGGTACGCGTGTCCGCACTGTCCCGTCCGCATGACGCACTCGGCCAACATGATGCGGCACGTGCAGGCGGTACACGAGCGCAGGATAGTGAAGACGTGCAAACCATGCGGCAAAGGATTTACGCACAAAAATGGCTACGATTCGCATATGCTATCACACCACGGCATCGGGACGCAGCATGAGTGCAAAGTGTGCGGAAAGAAGTTCAAC]




>consensus_4755#1
CCGCCCACGCGTCCGAGAATATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGA
AGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAACAGCCCAC
CACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGTCGATCGTGGCGTGAA
GGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGCACCGGGCGAAGATTT
GGACGATGACGCGCGGGGCTCCAGCGACGACGACAGCTTCATAGCGGAAATGTACAACGC
CATCATGCGCAAACCGCAACGAGCCTACACGCAGTCGAAAGTTGAGCAAGAGTACATTTC
GAACGAAATGTACCACCTGCTGGACCTGTCGAAGTATCGGCGCCAGCGGTATCTGTGCGA
AATGTGCGGGAAGATGGTGAGCGATATCGTGTCGCACATCGTCAGCCACAAGCAGGAGGC
CCGGTACGCGTGTCCGCACTGTCCCGTCCGCATGACGCACTCGGCCAACATGATGCGGCA
CGTGCAGGCGGTACACGAGCGCAGGATAGTGAAGACGTGCAAACCATGCGGCAAAGGATT
TACGCACAAAAATGGCTACGATTCGCATATGCTATCACACCACGGCATCGGGACGCAGCA
TGAGTGCAAAGTGTGCGGAAAGAAGTTCAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4755#0      CCGCCCACGCGTCCGCTGCTACCGAAACAGAAACCAATCATGGAGCTAGTTGTGCAGGAA 60
consensus_4755#1      CCGCCCACGCGTCCGAGAATATGAAGATGAAGAAGAA----GAAGAAGAAGAAGAAGAAG 56
                      ***************    **   * *   * *  **    * **        * ** * 

consensus_4755#0      ATGTGGAACTTTTGTCGATTTTGTTTAAGCCAGGACGAAGATCTTCTTATCCCGATCAGG 120
consensus_4755#1      AGGAAGAA-----GAAGAAGAAGAAGAAG--AGGAAGAAGGA-TATTCATGCTTCTCAAG 108
                      * *  ***     *  **    *   ***  **** ****   *  * ** *   *** *

consensus_4755#0      AACGCACTGGACGAGCACGTCACCGTCGACAATATAGAACGATTCACGGGCATCGCTA-T 179
consensus_4755#1      CGAACA---GCCCACCACACAATCGATGGTGCTCGCAAGCCCCTCTCCCCCACCATCGGT 165
                          **   * * * ***   * **  *    *    * *   ** *   ** *     *

consensus_4755#0      CGAACCGGACGAAAACATTCA--CGATGCCATTTGTACCG-ATTGCTCCAACCG-ATTGT 235
consensus_4755#1      CGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGC 225
                      *** *  * **  **   * *     **  *   * ** * * *   * ***   ** * 

consensus_4755#0      ACACGTATGCTGTCTTCCGGCGGTCTTGCTTAAGGAACGATGCCTATTTACGTAAAATTT 295
consensus_4755#1      AC-CGGGCGAAGATTTG-GACGATGACGCGCGGGGCTCCA---GCGACGACGACAGCTTC 280
                      ** **   *  *  **  * ** *   **    **  * *         ***  *  ** 

consensus_4755#0      ACC-CACAAATGTGTGCTGATGACATAC-TGGATGAAGTAGATGCTGCA-GCGGCTAATC 352
consensus_4755#1      ATAGCGGAAATGTACAACGCCATCATGCGCAAACCGCAACGAGCCTACACGCAGTCGAAA 340
                      *   *  ******     *    *** *    *       **  ** ** ** *   *  

consensus_4755#0      ACAGTACCGACCCGTGTGTTAACCGGAAGTTGGAAAGTGTCGTTCCGAAGGCATCCTCTT 412
consensus_4755#1      GTTGAGCAAGAGTACATTTCGAACGAAATGTACCACCTGCTGGACCTGTCGAAGTATCGG 400
                         *  *         * *  * ** **  *   *  **  *  **    * *   **  

consensus_4755#0      CCCAAGGGACGAGTGTGTCAGAAGAATATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAG 472
consensus_4755#1      CGCCAGCGGTATCTGTGCGAAATGTGCGGGAAGATGGTGAGCGATATCGTGTCGCACATC 460
                      * * ** *     ****  * * *     *******  **   * *    *  * * *  

consensus_4755#0      AAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGGATATTCATGCTTCTCAAGCGAAC 532
consensus_4755#1      GTCAGCCACAAGCAGGAGGCCCGGTACGCGTGTCCGCACTGTCCCGTCCGCATGACGCAC 520
                         **  * *** ** **     * *   *     * *   **  *         ** **

consensus_4755#0      A-GCCCACCACA------CAATCGATGGTGCT-CGCAAGCCCCTCTCCCCCACCATCGGT 584
consensus_4755#1      TCGGCCAACATGATGCGGCACGTGCAGGCGGTACACGAGCGCAGGATAGTGAAGACGTGC 580
                        * *** **        **   *  ** * * * * *** *         *  *   * 

consensus_4755#0      CGATCGTGGCGTGAAGGATGAGCTAGTGGAAGAAGAACTGTACTCGGCTAACTACATCGC 644
consensus_4755#1      AAACCATGCGGCAAAGGATTTAC--GCACAAAAATGGCTACGATTCGCATATGCTATCAC 638
                        * * **  *  ******   *  *   ** **   **    *  **  *    *** *

consensus_4755#0      ACCG-GGCGAAGATTTGGACGATGACGCGCGGGGC-TCCAGCGACGACGACAGCTTCAT 701
consensus_4755#1      ACCACGGCATCGGGACGCAGCATGA-GTGCAAAGTGTGCGGAAAGAAGTTCAAC----- 691
                      ***  ***   *    * *  **** * **   *  * * *  *  *   ** *