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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4765#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1188 fasta sequence
[AGAATCGGCCGAGGCATGTNAAGATCGGTGCGACTGGGGTCGCATCTGCAGAAGGCGACCTGTGGCTTTGGGGAGTGCAATCTGGGCAGTCTGATAGCTGACTCGATGGTGGCCGCCTTTGTGCCGAAGGCCGAACCGGGCCAAATGGACCTATGCAGCCGTTGCCGTCCTTGCCGTCGGGTGGCATTCGAGTAGGACTTGTTCCGTGGAGATCTTGCGGTTTCAAAAACCTTGGATCCGAAAGGTGGCTTGGCCGGTTTCGGAAGAACCGCGGCCTCCGGTTCTTGGTTTTCCGAACATTGCGCCGGGGCGGAAACCCAATCCTTAGAATTCCGGAGGCCTTGATTGGAAGGTTACCAAGGTTGGTGGGCCCAAAAGTTCCTTTGGGGGGACGGAGGGAACCCGGGGTTTTCCAAACCGGGTTGCCCAAACCAATTGCCTTGCCACGGGGTTGTTCCCGCGGGTTTTTGNCGGCGGTTCCTTGGTTCCAAACCGGTTCAACCAAAACCCCCGGGGGTCCCAGNGGGGAAAACCCGGGGGGTTGGCCTTCCGGCCGGTTTTGGGAACCGGTTTGCCTTGGTTGGTCCACTTGGAATTTCGGTTGAAACCGGGTTTGGCCCCCNAAGNTAACGGCCGGCCCCGGGGTAGGAAAACCCCGGGTTTCCCCGGCGGAAAAAGTTATTCCTGCCGGGTTCCAATTAAACGGANAAACATTCCGGTTTTCCCCCTTGNGACCGCGAGGCGCGGATNCGGGTTGAATTGCGGGGTTTTTAAGCCAATTGGTTATCCGGCAAGGCCGGGTTAACGGCGGAACCAAGCGGAAAAAAAGNGCGGTTGGACAATTGGGGGGCCCCGGGGTTAAAGGCAGTATTTCGAGCGGCCGGTTTTTCGAAGAAAGGGCCTTACGGTTTCCGAGGGGGAACCCCAGAAGTTCCGGGCCCCCCNGGGTTGCCTTTGGCCACGGGGGGCAATTTTGGGNANTTTACGGAACAGCGGGCACTTTANACCGGGGTTTTACTTAAACCGGGTTAAGAAGGTAAGACCAAGAAGTACCCTTTTGGNGGGGGTTAAAGCTTAGGGTAACCTTTNGGNTTGGTTNAAGGTCAAACATTAGGGGGTCNANAAGAGTTAAACTCTCACATTTTTTCTTTCCAGTTACCAGCCNTTTTTAAAAGGTTTTANAAGAGA]
[+] EMBL BX468583 [AGAATCGGCCGAGGCATGTNAAGATCGGTGCGACTGGGGTCGCATCTGCAGAAGGCGACCTGTGGCTTTGGGGAGTGCAATCTGGGCAGTCTGATAGCTGACTCGATGGTGGCCGCCTTTGTGCCGAAGGCCGAACCGGGCCAAATGGACCTATGCAGCCGTTGCCGTCCTTGCCGTCGGGTGGCATTCGAGTAGGACTTGTTCCGTGGAGATCTTGCGGTTTCAAAAACCTTGGATCCGAAAGGTGGCTTGGCCGGTTTCGGAAGAACCGCGGCCTCCGGTTCTTGGTTTTCCGAACATTGCGCCGGGGCGGAAACCCAATCCTTAGAATTCCGGAGGCCTTGATTGGAAGGTTACCAAGGTTGGTGGGCCCAAAAGTTCCTTTGGGGGGACGGAGGGAACCCGGGGTTTTCCAAACCGGGTTGCCCAAACCAATTGCCTTGCCACGGGGTTGTTCCCGCGGGTTTTTGNCGGCGGTTCCTTGGTTCCAAACCGGTTCAACCAAAACCCCCGGGGGTCCCAGNGGGGAAAACCCGGGGGGTTGGCCTTCCGGCCGGTTTTGGGAACCGGTTTGCCTTGGTTGGTCCACTTGGAATTTCGGTTGAAACCGGGTTTGGCCCCCNAAGNTAACGGCCGGCCCCGGGGTAGGAAAACCCCGGGTTTCCCCGGCGGAAAAAGTTATTCCTGCCGGGTTCCAATTAAACGGANAAACATTCCGGTTTTCCCCCTTGNGACCGCGAGGCGCGGATNCGGGTTGAATTGCGGGGTTTTTAAGCCAATTGGTTATCCGGCAAGGCCGGGTTAACGGCGGAACCAAGCGGAAAAAAAGNGCGGTTGGACAATTGGGGGGCCCCGGGGTTAAAGGCAGTATTTCGAGCGGCCGGTTTTTCGAAGAAAGGGCCTTACGGTTTCCGAGGGGGAACCCCAGAAGTTCCGGGCCCCCCNGGGTTGCCTTTGGCCACGGGGGGCAATTTTGGGNANTTTACGGAACAGCGGGCACTTTANACCGGGGTTTTACTTAAACCGGGTTAAGAAGGTAAGACCAAGAAGTACCCTTTTGGNGGGGGTTAAAGCTTAGGGTAACCTTTNGGNTTGGTTNAAGGTCAAACATTAGGGGGTCNANAAGAGTTAAACTCTCACATTTTTTCTTTCCAGTTACCAGCCNTTTTTAAAAGGTTTTANAAGAGA]
consensusID : consensus_4765#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 957 fasta sequence
[CAGATCGGCACAGGGCTTNTGTACACGGGCGATCATCCGACCATTCGATGAATCCCGTGTCCGAATATCCAACAGTCGTCAGTCAACCGAACGGACATCGGGTGCTGATCGTGCAGGCTTCCGCCTACACCAAGCTGGTCGGGGACATTGTGCTGTACTTTGACGAGCAGGGCGTCATTCAACGGTGGGAAGGTAATCCAATCTATCTGAGCAATGACATTGTGCCGGATCCGACCGTGGCCCAGGCACTGATCCCGTGGAAGGTTGCGGTGGACGAGATCGGCAACAGAAAGATCGGTGCGACTGGGGTCGATCTGCAGAAGGCGACCTGTGGCTTTGGGGAGTGCAATCTGGGCAGTTTGATAGCTGACTCGATGGTGGCCGCCTTTGTGCCGAAGGCCGAACCGGGGCCAATGGACCGTATGCAGCCGTTGCCGTCCTTGCCGTCGGTGGCATTCGAGTAGGACTGTTCCGTGGAGATCTTGCGTTCAAAAACCTGATCGAAGTGCTGCCGTTCGAGAACGCGCTCGTCTGTTTCGACATGCGCGGCGACCATCTGATCGAGCTGATGGAGTACAGTGTGGCCAAGTCTTGGGACGAGGACCGGTTCAACGGTGCCAACATGCTGCAGGTGTCCGGTTTGCGCGTCCTGTTCAACGTCACCAACCCGGTCGGGGAACGGGTGCTCGCGTTGGACGTGCTGTGTCATGATTGTGACGTGCCCAAGTACGCGCCGGTAGAACCGTTCCGGAAGTATCGCGTCATAACGAACTCGTTCCTGGCCGGCGGTGGTGATGGGTTTACCATGTTCGAGCGGTACGGACAGCGAAAGGTGAATGGGCCGGTAGATATCGACGCGTTCGAGAGCTACGTTCGGGACCGATCGCCCGTGCTGCANGGGATTGGATGGAAGGATAACGGTTCTAACGTAGAGTAGCAATCTTTGGGGTAGTGGTA]
[+] EMBL BX468032 [CAGATCGGCACAGGGCTTNTGTACACGGGCGATCATCCGACCATTCGATGAATCCCGTGTCCGAATATCCAACAGTCGTCAGTCAACCGAACGGACATCGGGTGCTGATCGTGCAGGCTTCCGCCTACACCAAGCTGGTCGGGGACATTGTGCTGTACTTTGACGAGCAGGGCGTCATTCAACGGTGGGAAGGTAATCCAATCTATCTGAGCAATGACATTGTGCCGGATCCGACCGTGGCCCAGGCACTGATCCCGTGGAAGGTTGCGGTGGACGAGATCGGCAACAGAAAGATCGGTGCGACTGGGGTCGATCTGCAGAAGGCGACCTGTGGCTTTGGGGAGTGCAATCTGGGCAGTTTGATAGCTGACTCGATGGTGGCCGCCTTTGTGCCGAAGGCCGAACCGGGGCCAATGGACCGTATGCAGCCGT ]
[+] EMBL BX623941 [ CTGGGGTCGATCTGCAGAAGGCGACCTGTGGCTTTGGGGAGTGCAATCTGGGCAGTCTGATAGCTGACTCGATGGTGGCCGCCTTTGTGCCGAAGGCCGAACC GGGCCAATGGACC TATGCAGCCGTTGCCGTCCTTGCCGTCGGTGGCATTCGAGTAGGACTGTTCCGTGGAGATCTTGCGTTCAAAAACCTGATCGAAGTGCTGCCGTTCGAGAACGCGCTCGTCTGTTTCGACATGCGCGGCGACCATCTGATCGAGCTGATGGAGTACAGTGTGGCCAAGTCTTGGGACGAGGACCGGTTCAACGGTGCCAACATGCTGCAGGTGTCCGGTTTGCGCGTCCTGTTCAACGTCACCAACCCGGTCGGGGAACGGGTGCTCGCGTTGGACGTGCTGTGTCATGATTGTGACGTGCCCAAGTACGCGCCGGTAGAACCGTTCCGGAAGTATCGCGTCATAACGAACTCGTTCCTGGCCGGCGGTGGTGATGGGTTTACCATGTTCGAGCGGTACGGACAGCGAAAGGTGAATGGGCCGGTAGATATCGACGCGTTCGAGAGCTACGTTCGGGACCGATCGCCCGTGCTGCANGGGATTGGATGGAAGGATAACGGTTCTAACGTAGAGTAGCAATCTTTGGGGTAGTGGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4765#0 AGAATCGGCCGAGGCATGTNAAGATCGGTGCGACTGGGGTCGCATCTGCAGAAGGCGACC 60
consensus_4765#1 --------------------------------------------------CAGATCGGCA 10
* ** *
consensus_4765#0 TGTGGCTTTGGGGAGTGCAATCTGGGCAGTCTGATAGCTGACTCGATGGTGGCCGCCTTT 120
consensus_4765#1 CAGGGCTTNT----GTACA---CGGGCGATCATCCGACC-ATTCGATGAATCCCGTGT-- 60
***** ** ** **** ** * * ****** *** *
consensus_4765#0 GTGCCGAAGGCCGAACCGGGCCAAATGGACCTATGCAGCCGTTGCCGTCCTTGCCGTCGG 180
consensus_4765#1 ---CCGAATATCCAACAGTCGTCAGTCAACCGA-ACGGACATCGG-GTGCTGATCGT--G 113
***** * *** * * * *** * * * * * * ** ** *** *
consensus_4765#0 GTGGCATTCGAGTAGGACTTGTTCCGTGGAGATCTTGCGGTTTCAAAAACCTTGGATCCG 240
consensus_4765#1 CAGGCTTCCGCCTACACCAAGCTGGTCGGGGACATTGTGCTGTA------CTTTGACGAG 167
*** * ** ** * * * ** ** *** * * * *** ** *
consensus_4765#0 AAAGGTGGCTTGGCCGGTTTCGGAAGAACCGCGGCCTCCGGTTCTTGGTTTTCCGAACAT 300
consensus_4765#1 CAGGGCGTCATTCAACGGTGGGAAGGTAATCCAATCTA----TCTGAGCAAT---GACAT 220
* ** * * * * * * * * * * ** *** * * ****
consensus_4765#0 TGCGCCGGGGCGGAAACCCAATCCTTAGAATTCCGGAGGCCTTGATTGGAAGGTTACCAA 360
consensus_4765#1 TGTGCCGGATCCGA--CCGTGGCCCAGGCACT-----GATCCCG--TGGAAGGTTGC--- 268
** ***** * ** ** ** * * * * * * ********* *
consensus_4765#0 GGTTGGTGGGCCCAAAAGTTCCTTTGGGGGGACGGAGGGAACCCGGGGTTTTCCAAACCG 420
consensus_4765#1 GGTGGACGAGATCGGCAAC------AGAAAGATCGGTGCGACTGGGGTCGATCTGCAGAA 322
*** * * * * * * ** * * ** *** ** *
consensus_4765#0 GGTTGCCCAAACCAATTGCCTTGCCACGGGGTTGTTCCCGCGGGTTTTTGNCGGC-GGTT 479
consensus_4765#1 GGC------GACCTGTGGCTTTG----GGGAGTGCAATCTGGGCAGTTTGATAGCTGACT 372
** *** * ** *** *** ** * ** **** ** * *
consensus_4765#0 CCTTGGTTCCAAACCGGTTCAACCAAAACCCCCGGGGGTCCCAGNGGGGAAAACCCGGGG 539
consensus_4765#1 CGATGGTGGCCGCCT--TTGTGCCGAAGGCCGAACCGGGGCCAATGGACCGTATGCAGCC 430
* **** * * ** ** ** ** ** *** ** * * *
consensus_4765#0 GGTTGGCCTTCCGGCCGGTTTTGGGAACCGGTTTGCCTTGGTTGGTCCACTTGGAATTTC 599
consensus_4765#1 G-TTGCCGTCCTTGCCGTCGGTGGCATTCGAGTAG----GACTGTTCCGTGGAGATCTTG 485
* *** * * * **** *** * ** * * * ** *** ** **
consensus_4765#0 GGTTGAAACCGGGTTTGGCCCCCNAAGNTAACGGCCGGCCCCGGGGTAGGAAAACCCCGG 659
consensus_4765#1 CGTTCAAA---AACCTGAT---CGAAGT--GCTGCCGTTC-------GAGAACGCGCTCG 530
*** *** ** * *** * **** * *** * * *
consensus_4765#0 GTTTCCCCGGCGGAAAAAGTTATTCCTGCCGGGTTCCAATTAAACGGANAAACATTCCGG 719
consensus_4765#1 TCTGTTTCGACATGCGCGGCGACCA---------TCTGATCGAGCTGATGGAG--TACAG 579
* ** * * * ** ** * * ** * * * *
consensus_4765#0 TTTTCCCCCTTGNGACCGCGAGGCGCGGATNCGGGTTGAATTGCGGGGTTTTTAAGCCAA 779
consensus_4765#1 TGTGGCC-----AAGTCTTGGGACGAGGACC--GGTTCAACGGTGCCAACATGCTGC-AG 631
* * ** * * * ** *** **** ** * * * ** *
consensus_4765#0 TTGGTTATCCGGCAAGGCCGGGTTAACGGCGGAACCAAGCGGAAAAAAAGNGCGGTTGGA 839
consensus_4765#1 GTGTCCGGTTTGCGCGTCCTGTTCAACGTC---ACCAACC------------CGGTCGGG 676
** ** * ** * * **** * ***** * **** **
consensus_4765#0 CAATTGGGGGGCCCCGGGGTTAAAGGCAGTATTTCGAGCGGCCGGTTTTTCGAAGAAAGG 899
consensus_4765#1 GAAC----GGGTGCTCGCGTTGGACGTGCTGTGTCATGATTGTGACGTGCCCAAGTACGC 732
** *** * * *** * * * * ** * * * * *** * *
consensus_4765#0 GCCT-TACGGTTTCCGAGGGGGAACCCCAGAAGTTCCGGGCCCCCCNGGGTTGCCTTTGG 958
consensus_4765#1 GCCGGTAGAACCGTTCCGGAAGTATCGCGTCATAACGAACTCGTTCCTGGCCGGCGGTGG 792
*** ** ** * * * * * * * * ** * * ***
consensus_4765#0 CCACGGGGGGCAATTTTGGGNANTTTACGGAACAGCGGGCACTTTANACCGGGGTTTTAC 1018
consensus_4765#1 TGATGGGTTTACCATGTTCGAGCGGTACGGA-CAGCGAAAGGTGAATGGGCCGGTAGATA 851
* *** * * * ****** ***** * * ***
consensus_4765#0 TTAAACCGGGTTAAGAAGGTAAGACCAAGA---AGTACCCTT-TTGGNGGGGGTTAAAGC 1074
consensus_4765#1 TCGA--CGCGTTCGAGAGCTACGTTCGGGACCGATCGCCCGTGCTGCANGGGATTGGATG 909
* * ** *** ** ** * * ** * *** * ** *** ** *
consensus_4765#0 TTAGGGTAACCTTTNGGNTTGGTTNAAGGTCAAACATTAGGGGGTCNANAAGAGTTAAAC 1134
consensus_4765#1 GAAGGATAACGGTTCTAAC--GTAGAGTAGCAATCTTTGGGGTAGTGGTA---------- 957
*** **** ** ** * *** * ** *** *
consensus_4765#0 TCTCACATTTTTTCTTTCCAGTTACCAGCCNTTTTTAAAAGGTTTTANAAGAGA 1188
consensus_4765#1 ------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||