These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4818#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 819 fasta sequence [CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGAAATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTCTCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGGACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC] [+] EMBL BM592324 [CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGAAATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTCTCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGT ] [+] EMBL BM605313 [ ccgGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAACTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGGACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC] consensusID : consensus_4818#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG] [+] EMBL BM609376 [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4818#0 CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGA 60 consensus_4818#1 ------------------------------------------------------------ consensus_4818#0 AATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTC 120 consensus_4818#1 ------------------------------------CCGCCCACGCGTCCGCCCACGCGT 24 ** * *** *** consensus_4818#0 TCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTAC 180 consensus_4818#1 CCG-GCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTAC 83 ** ******************************************************** consensus_4818#0 TCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGC 240 consensus_4818#1 TCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGC 143 ************* ********************* ************* ********** consensus_4818#0 GCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAA 300 consensus_4818#1 GCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAA 203 ************************************************************ consensus_4818#0 CATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGC 360 consensus_4818#1 CATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGC 263 ************************************************************ consensus_4818#0 GCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCG 420 consensus_4818#1 GCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCG 323 ************************************************************ consensus_4818#0 GTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCG 480 consensus_4818#1 GTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCG 383 ********************************** ************************* consensus_4818#0 TGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCA 540 consensus_4818#1 TGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCA 443 ************************************************************ consensus_4818#0 GCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCG 600 consensus_4818#1 GCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCG 503 ************************************************************ consensus_4818#0 GTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGC 660 consensus_4818#1 GTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGC 563 ********** ******** **************************************** consensus_4818#0 CGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCT 720 consensus_4818#1 CGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCT 623 ************************************************************ consensus_4818#0 TCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGG 780 consensus_4818#1 TCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG- 682 ***************** *** ********* *************************** consensus_4818#0 ACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC 819 consensus_4818#1 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||