These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_484#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 370 fasta sequence [CCGCCCACGCGTGCGCGGACGCGTGGGTAGAGAGAGAAAATAGAAAGATATAGAAAAGAAAAGACAGGTGTAGAGAGAAAAACAGGAAGAGATAAAGAGAAAGGAGACAGAGAAAGAAAGATAAATAGAAAGAGAGAGAAAGAGAGAGATAGAAAGAGAGAGAGAGAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGATAGAGAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAGGTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGCAGGGGATTGA] [+] EMBL BM623017 [CCGCCCACGCGTGCGCGGACGCGTGGGTAGAGAGAGAAAATAGAAAGATATAGAAAAGAAAAGACAGGTGTAGAGAGAAAAACAGGAAGAGATAAAGAGAAAGGAGACAGAGAAAGAAAGATAAATAGAAAGAGAGAGAAAGAGAGAGATAGAAAGAGAGAGAGAGAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGATAGAGAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAGGTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGCAGGGGATTGA] consensusID : consensus_484#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 247 fasta sequence [CCGGGCAAGCAGAATTTGATAGCGAGAAAGAGATAGAGAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAGGTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGCAGGGGATTGAATGCGACAAATATCAAATAAAGAAAAATGTCTATTTTTTACAC] [+] EMBL BM650521 [CCGGGCAAGCAGAATTTGATAGCGAGAAAGAGATAGAGAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAGGTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGCAGGGGATTGAATGCGACAAATATCAAATAAAGAAAAATGTCTATTTTTTACAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_484#0 CCGCCCACGCGTGCGCGGACGCGTGGGTAGAGAGAGAAAATAGAAAGATATAGAAAAGAA 60 consensus_484#1 ------------------------------------------------------------ consensus_484#0 AAGACAGGTGTAGAGAGAAAAACAGGAAGAGATAAAGAGAAAGGAGACAGAGAAAGAAAG 120 consensus_484#1 ------------------------------------------------------------ consensus_484#0 ATAAATAGAAAGAGAGAGAAAGAGAGAGATAGAAAGAGAGAGAGAGAAGCAGAGAGAGAG 180 consensus_484#1 --------------------------------------------CCGGGCAAGCAGAATT 16 *** *** consensus_484#0 AGAGAGAGAGAGAGAGAAAGAGATAGAGAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG 240 consensus_484#1 TGATAGCGAGAAAGAGATAGAGA--GTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 74 ** ** **** ***** ***** * * *** * ************************* consensus_484#0 AGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAG 300 consensus_484#1 AGAGAGAGAGAGAGGAGAGAGAAAAATACGATACCTTACGTAGGTACGCAGAAAGGAAAG 134 ************************************************************ consensus_484#0 GTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGC 360 consensus_484#1 GTACAAGAATAGGTGAGCTAGTTTTATGCGATGATTCTGTAAGGCGGACAGATTTCTGGC 194 ************************************************************ consensus_484#0 AGGGGATTGA------------------------------------------- 370 consensus_484#1 AGGGGATTGAATGCGACAAATATCAAATAAAGAAAAATGTCTATTTTTTACAC 247 ********** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||