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Anopheles gambiae
cluster # 4871 cluster # 4871       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4871#0 length = 1142 sequences # 4  

consensusID : consensus_4871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1142
fasta sequence
                              [TATTTCCATTAGCCCCCTGCTCCCTGCGAAACTGTCGCATATCCCNGAAAATCCNGAAAATTGACAAAAATCGATTACCATTTTTTTGTTGTTGATTGTTTCTAAACTGTACCGCGCGAATGGGATGGGGCGAAACGGATTGGCGGGGCCATGTTTGCGCGTCCGCCCATTTACTGCAGCAGCGGTTTAGGTTTAGGTGTGTATGATTAATTCCTGTTTCTTTTC-TTTTTTTTTGTTGTTGTTTGCACTCCCAAAACTTCAATCATTACGATATGTGTTTTTTTTTTGTTTGCATTTTCCTTTCTAGTTTTGTAGTTTGGTTGTTGCAAAAATGATTTTCCCTTTTGCGTCCGTTGCACTTTCTCCTCTTTATTCATTTCTTTTTTTTTCAATCTTTATAATTGTTTTTTTGTTTTGCTTCCTTCCGTAGCCCTCATCCTGCTAAGGCCAATCTAATTAGTAGTGTTAGTATTCCTTTTGCTCAATTCAACCATAGTTCTAATCCATATAATTATCCTCCCCCTCTAGCCCTACTACTCGAAACGCTTTCTGGCTTCTCTTTTTCTTTTTCTTTTTTTTTTAATTAACGGACGCGTCCCAAACCGCATTTTTGTTTTTTTTGCTGCAAATGCCGTTTTTTACCGTGTAATTTACTTCCGGGAGGG-GCTTGTTTGTCCCAACGTAA-TGTTATGCCTAGTGCTACCGC-GCGAC-CTATGCATATTTAACGTTTAGATGG-CTAATGCGAGCTAGCCTTGGGA-GCCGGTGCGCTGTTTTCCTGTAAAC-AACNCGAACTACAACCAACCTAAAGACACCGCAAAAATGTTCCGAGTTGGATTTTTGGGTAGATGGGCGGATGGGTCCAATAGCAAATCGCGCCATCGAAAGCAATTAAGCAGAGCGTCTGTGTGAGCTCGTCCTCGTTACGGGTTTTTGTTTTTTTTTTCCTTCTGGTTGGCCCCCTGATTCTCCTGTCTGTGCGTGTACTTTCTGATTTTGTTCCACTTTTTGTTCCTAAGCTTTATTCAATTCCAAAAAAAAAAAAAAAAAATATAACAATAAAAAAAAAAAAACATAAATAAAAAAAAAAAAAAACAGGCATGTTGCGGCCGCTCCAACATCTCNACGTGCCANATTCTGCCTCG]

[-] EMBL BX626215             [TATTTCCATTAGCCCCCTGCTCCCTGCGAAACTGTCGCATATCCCNGAAAATCCNGAAAATTGACAAAAATCGATTACCATTTTTTTGTTGTTGATTGTTTCTAAACTGTACCGCGCGAATGGGATGGGGCGAAACGGATTGGCGGGGCCATGTTTGCGCGTCCGCCCATTTANTGCAGCAGCGGTTTAGGTTTAGGTGTGTATGATTAATTCCTGTTTCTTTTCTTTTTTTTTTGTTGTTGTTTGCACTCCCAAAACTTCAATCATTACGATATGTGTTTTTTTTTTGTTTGCATTTTCCTTTCTAGTTTTGTAGTTTGGTTGTTGCAAAAATGATTTTCCCTTTTGCGTCCGTTGCACTTTCTCCTCTTTATTCATTTCTTTTTTTTTCAATCTTTATAATTGTTTTTTTGTTTTGCTTCCTTCCGTAGCCCTCATCCTGCTAAGGCCAATCTAATTAGTAGTGTTAGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX629266             [                                                                                                                             TGGGGTNACACGGATTGGCGGGGCCATGTTTGCGCGTCCGCCCATTTACTGCAGCAGCGGTTTAGGTTTAGGTGTGTATGATTAATTCCTGTTTCTTTTC TTTTTTTTTGTTGTTGTTTGCACTCCCAAAACTTCAATCATTACGATATGTGTTTTTTTTTTGTTTGCATTTTCCTTTCTAGTTTTGTAGTTTGGTTGTTGCAAAAATGATTTTCCCTTTTGCGTCCGTTGCACTTTCTCCTCTTTATTCATTTCTTTTTTTTTCAATCTTTATAATTGTTTTTTTGTTTTGCTTCCTTCCGTAGCCCTCATCCTGCTAAGGCCAATCTAATTAGTAGTGTTAGTATTCCTTTTGCTCAATTCAACCATAGTTCTAATCCATATAATTATCCTCCCCCTCTAGCCCTACTACTCGAAACGCTTTCTGGCTTCTCTTTTTCTTTTTCTTTTTTTTTTAATTAACGGACGCGTCCCAAACCGCATTTTTGTTTTTTTTGCTGCAAATGCCGTTTTTTACCGTGTAATTTACTTCCGGGAGGG GCTTGTTTGTCCCAACGTAA TGTTATGCCTAGTGCTACCGC GCGAC CTATGCATATTTAACGTTTAGATGG CTAATGCGAGCTAGCCTTGGGA GCCGGTGCGCTGTTTTCCTGTAAAC AACNCGA                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX629159             [                                                                                                                                        GGATTGGCGGGGCCATGTTTGCGCGTCCGCCCATTTACTGCAGCAGCGGTTTAGGTTTAGGTGTGTATGATTAATTCCTGTTTCTTTTC TTTTTTTTTGTTGTTGTTTGCACTCCCAAAACTTCAATCATTACGATATGTGTTTTTTTTTTGTTTGCATTTTCCTTTCTAGTTTTGTAGTTTGGTTGTTGCAAAAATGATTTTCCCTTTTGCGTCCGTTGCACTTTCTCCTCTTTATTCATTTCTTTTTTTTTCAATCTTTATAATTGTTTTTTTGTTTTGCTTCCTTCCGTAGCCCTCATCCTGCTAAGGCCAATCTAATTAGTAGTGTTAGTATTCCTTTTGCTCAATTCAACCATAGTTCTAATCCATATAATTATCCTCCCCCTCTAGCCCTACTACTCGAAACGCTTTCTGGCTTCTCTTTTTCTTTTTCTTTTTTTTTTAATTAACGGACGCGTCCCAAACCGCATTTTTGTTTTTTTTGCTGCAAATGCCGTTTTTTACCGTGTAATTTACTTCCGGGAGGG GCTTGTTTGTCCCAACGTAA TGTTATGCCTAGTGCTACCGC GCGAC CTATGCATATTTAACGTTTAGATGG CTAATGCGAGCTAGCCTTGGG                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BX469803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGTGTAATTTACTTCCGGGAGGGNGCTTGTTTGTCCCAACGTAACTGTTATGCCTAGTGCTACCGCTGCGACGCTATGCATATTTAACGTTTAGATGGCCTAATGCGAGCTAGCCTTGGGACGCCGGTGCGCTGTTTTCCTGTAAACTAACACGTACTACAACCAACCTAAAGACACCGCAAAAATGTTCCGAGTTGGATTTTTGGGTAGATGGGCGGATGGGTCCAATAGCAAATCGCGCCATCGAAAGCAATTAAGCAGAGCGTCTGTGTGAGCTCGTCCTCGTTACGGGTTTTTGTTTTTTTTTTCCTTCTGGTTGGCCCCCTGATTCTCCTGTCTGTGCGTGTACTTTCTGATTTTGTTCCACTTTTTGTTCCTAAGCTTTATTCAATTCCAAAAAAAAAAAAAAAAAATATAACAATAAAAAAAAAAAAACATAAATAAAAAAAAAAAAAAACAGGCATGTTGCGGCCGCTCCAACATCTCNACGTGCCANATTCTGCCTCG]


>consensus_4871#0 TATTTCCATTAGCCCCCTGCTCCCTGCGAAACTGTCGCATATCCCNGAAAATCCNGAAAA TTGACAAAAATCGATTACCATTTTTTTGTTGTTGATTGTTTCTAAACTGTACCGCGCGAA TGGGATGGGGCGAAACGGATTGGCGGGGCCATGTTTGCGCGTCCGCCCATTTACTGCAGC AGCGGTTTAGGTTTAGGTGTGTATGATTAATTCCTGTTTCTTTTCTTTTTTTTTGTTGTT GTTTGCACTCCCAAAACTTCAATCATTACGATATGTGTTTTTTTTTTGTTTGCATTTTCC TTTCTAGTTTTGTAGTTTGGTTGTTGCAAAAATGATTTTCCCTTTTGCGTCCGTTGCACT TTCTCCTCTTTATTCATTTCTTTTTTTTTCAATCTTTATAATTGTTTTTTTGTTTTGCTT CCTTCCGTAGCCCTCATCCTGCTAAGGCCAATCTAATTAGTAGTGTTAGTATTCCTTTTG CTCAATTCAACCATAGTTCTAATCCATATAATTATCCTCCCCCTCTAGCCCTACTACTCG AAACGCTTTCTGGCTTCTCTTTTTCTTTTTCTTTTTTTTTTAATTAACGGACGCGTCCCA AACCGCATTTTTGTTTTTTTTGCTGCAAATGCCGTTTTTTACCGTGTAATTTACTTCCGG GAGGGGCTTGTTTGTCCCAACGTAATGTTATGCCTAGTGCTACCGCGCGACCTATGCATA TTTAACGTTTAGATGGCTAATGCGAGCTAGCCTTGGGAGCCGGTGCGCTGTTTTCCTGTA AACAACNCGAACTACAACCAACCTAAAGACACCGCAAAAATGTTCCGAGTTGGATTTTTG GGTAGATGGGCGGATGGGTCCAATAGCAAATCGCGCCATCGAAAGCAATTAAGCAGAGCG TCTGTGTGAGCTCGTCCTCGTTACGGGTTTTTGTTTTTTTTTTCCTTCTGGTTGGCCCCC TGATTCTCCTGTCTGTGCGTGTACTTTCTGATTTTGTTCCACTTTTTGTTCCTAAGCTTT ATTCAATTCCAAAAAAAAAAAAAAAAAATATAACAATAAAAAAAAAAAAACATAAATAAA AAAAAAAAAAAACAGGCATGTTGCGGCCGCTCCAACATCTCNACGTGCCANATTCTGCCT CG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)