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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4996#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 785 fasta sequence
[CCCGAGGTTAACTGACAATACAAGCGTAGGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCTGGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTTTTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAAGGAGCTAATGACATGTGTGGTGGTTGAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAACGCACGGCTTTTAGACAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTNTTAGTGTATTATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACAATAAGGTGATAGTTCAATTCAAATGGCAAAGAAAACGGGGAAAGCAGTTATATTTATAACATGACCACCGTATACACAGGCGTNACACGCACGGNNTNTAACGGATTACATCTTGACACCCTTCCCCCCCCTGATCGGGTGACTCGATGAGAGACCANAGCAAACGCTTAGGATCAAAGGTATATACCCACTCATTCACCGGCAACCAAACTATAATTATTACACCNNGGCGNCGCCGCGCCCGCCCGCCGTCAACGAAATCCTACCATTATTACNACGCGTGGTTAATTGGCACAAACTATTAGTANTATTCCTCANCTGCACACACTCCTACTNCTCCCGGNCACCGNACNATCTCNNAGNCACGCAACGCATTTAGNCTACTACTAACACGAATTG]
[+] EMBL AL695502 [CCCGAGGTTAACTGACAATACAAGCGTAGGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCTGGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTTTTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAAGGAGCTAATGACATGTGTGGTGGTTGAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAACGCACGGCTTTTAGACAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTNTTAGTGTATTATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACAATAAGGTGATAGTTCAATTCAAATGGCAAAGAAAACGGGGAAAGCAGTTATATTTATAACATGACCACCGTATACACAGGCGTNACACGCACGGNNTNTAACGGATTACATCTTGACACCCTTCCCCCCCCTGATCGGGTGACTCGATGAGAGACCANAGCAAACGCTTAGGATCAAAGGTATATACCCACTCATTCACCGGCAACCAAACTATAATTATTACACCNNGGCGNCGCCGCGCCCGCCCGCCGTCAACGAAATCCTACCATTATTACNACGCGTGGTTAATTGGCACAAACTATTAGTANTATTCCTCANCTGCACACACTCCTACTNCTCCCGGNCACCGNACNATCTCNNAGNCACGCAACGCATTTAGNCTACTACTAACACGAATTG]
consensusID : consensus_4996#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 657 fasta sequence
[TTTCCTTTTTTTAACTATTTAAGTTGTACTACTCCGGGCTTAAGCACTCTTAATTTCATGCTTTATTTAGAGGCGAAAAGTTAGACGATACAC-ACAAGGCTCTGACAAATTACAAGCGTA-GGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCT-GGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTTTTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAGGAGCTAATGACATGTGTGGTGGTTAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAACGCACGGCTTTTAGAAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTTTTAGTGTATTATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACAATAAGGTGATAGTTAATTAGATGGCAAAGAAAACGGGGAAAGCAGTTATATTTTAAATGACCACGTTACACAGCGTTACACGCACGGTTTAACGGATTACATCTTGACCCTTCCCCCCCTTGTCGGGTGAATCGATGAGAGACAAGCAAACGTTAGGATCAAAGGTATATACACACTCATTA]
[+] EMBL BX625493 [TTTCCTTTTTTTAACTATTTAAGTTGTACTACTCCGGGCTTAAGCACTCTTAATTTCATGCTTTATTTAGAGGCGAAAAGTTAGACGATACAC ACAAGGCTCTGACAAATTACAAGCGTA GGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCT GGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTTTTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAGGAGCTAATGACATGTGTGGTGGTTAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAACGCACGGCTTTTAGAAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTTTTAGTGTATTATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACAATAAGGTGATAGTTAATTAGATGGCAAAGAAAACGGGGAAAGCAGTTATATTTTAAATGACCACGTTACACAGCGTTACACGCACGGTTTAACGGATTACATCTTGACCCTTCCCCCCCTTGTCGGGTGAATCGATGAGAGACAAGCAAACGTTAGGATCAAAGGTATATACACACTCATTA]
[+] EMBL BX628262 [ TTTAAGTTGTACTACTCCGGGCTTAAGCACTCTTAATTTCATGCTTTATTTAGAGGCGAAAAGTTAGACGATACAC ACAAGGCTCTGACAAATTACAAGCGTA GGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCT GGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTTTTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAGGAGCTAATGACATGTGTGGTGGTTAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAACGCACGGCTTTTAGAAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTTTTAGTGTATTATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACAATAAGGTGATAGTTAATTAGATGGCAAAGAAAACGGGGAAAGCAGTTATATTTTAAATGACCACGTTACACAGCGTTACACGCACGGTTTAACGGATTACATCTTGACCCTTCCCCCCCTTGTCGGGTGAATCG ]
[+] EMBL AGA283124 [ TTTAAGTTGTACTACTTCGGGCTTAAGCACTCTTAATTTCATGCTTTATTTAGAGGCGAAAAGTTAGACGATACACNNTTAGNNNNTGACAAATTACAAGCGTAGGGGTTGCAGCAATACTGTTAAAAACAAAAACAAACAAAAACACACAGCAAAACATAATTCTAAGTAGTAACAACCTACCTGGGTAAGCGTATGTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4996#0 ------------------------------------------------------------
consensus_4996#1 TTTCCTTTTTTTAACTATTTAAGTTGTACTACTCCGGGCTTAAGCACTCTTAATTTCATG 60
consensus_4996#0 --------------------------------CCCGAGGTTAACTGACAA--TACAAGCG 26
consensus_4996#1 CTTTATTTAGAGGCGAAAAGTTAGACGATACACACAAGGCT--CTGACAAATTACAAGCG 118
* * *** * ******* ********
consensus_4996#0 TAGGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAAT 86
consensus_4996#1 TAGGGTTGCAGCAATACTGTAAAAAACAAAAACAAACAAAAACACACAGCAAAACATAAT 178
************************************************************
consensus_4996#0 TCTAAGTAGTAACAACCTACCTGGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTT 146
consensus_4996#1 TCTAAGTAGTAACAACCTACCTGGTAAGCGTATGTGTAATTATCTGTATGTTTTCAATTT 238
************************************************************
consensus_4996#0 TTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAAAGGAGCTAATGACATGTGTGGTG 206
consensus_4996#1 TTATAACTCATTTGTTAATTGTGCGAGCTAGGAAAAA-GGAGCTAATGACATGTGTGGTG 297
************************************* **********************
consensus_4996#0 GTTGAAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAA 266
consensus_4996#1 GTT-AAAAGGGAGCGCGCGTTAGTGTTATGTTGCACCGGACCGTTGTAGTGGGGACGAAA 356
*** ********************************************************
consensus_4996#0 CGCACGGCTTTTAGACAAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTNTTAGTGTATT 326
consensus_4996#1 CGCACGGCTTTTAGA-AAGGCGGCGTCGAGTTCTGTGTGTAGTTAGTGTTTTAGTGTATT 415
*************** ********************************* **********
consensus_4996#0 ATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACA 386
consensus_4996#1 ATAGTGCGCGCTCTGCCCGCACCCTCCCCGTTTGGCGCGATACGATAAGTGAGTAGAACA 475
************************************************************
consensus_4996#0 ATAAGGTGATAGTTCAATTCAAATGGCAAAGAAAACGGGGAAAGCAGTTATATTTATAAC 446
consensus_4996#1 ATAAGGTGATAGTTAA--TTAGATGGCAAAGAAAACGGGGAAAGCAGTTATATTT-TAA- 531
************** * * * ********************************* ***
consensus_4996#0 ATGACCACCGTATACACAGGCGTNACACGCACGGNNTNTAACGGATTACATCTTGACACC 506
consensus_4996#1 ATGACCACGTTACACA---GCGTTACACGCACGGTTTA--ACGGATTACATCTTGAC--C 584
******** ** *** **** ********** * ***************** *
consensus_4996#0 CTTCCCCCCCCTGATCGGGTGACTCGATGAGAGACCANAGCAAACGCTTAGGATCAAAGG 566
consensus_4996#1 CTTCCCCCCCTTG-TCGGGTGAATCGATGAGAGAC--AAGCAAACG-TTAGGATCAAAGG 640
********** ** ******** ************ ******** *************
consensus_4996#0 TATATACCCACTCATTCACCGGCAACCAAACTATAATTATTACACCNNGGCGNCGCCGCG 626
consensus_4996#1 TATATACACACTCATTA------------------------------------------- 657
******* ********
consensus_4996#0 CCCGCCCGCCGTCAACGAAATCCTACCATTATTACNACGCGTGGTTAATTGGCACAAACT 686
consensus_4996#1 ------------------------------------------------------------
consensus_4996#0 ATTAGTANTATTCCTCANCTGCACACACTCCTACTNCTCCCGGNCACCGNACNATCTCNN 746
consensus_4996#1 ------------------------------------------------------------
consensus_4996#0 AGNCACGCAACGCATTTAGNCTACTACTAACACGAATTG 785
consensus_4996#1 ---------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||