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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5066#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1226 fasta sequence
[CACGCGCTCGACCATCTCGGCACGCAGAAGATACTGATCGTCGACTGGGACGTGCACCACGGGCAGGGCACGCAGCGGATGTTCTCCTCCGATCCGAGGGTGCTGTACTTCTCCATCCATCGGTACGAGCACGGCACGTTCTGGCCGAACCTGCGCGAGTCCGACTTTGACTACGTCGGCACCGGCAAGGGCGAGGGGTACAACTTCAACGTGCCGCTCAACAAGACGGGCATGACCAACGGCGACTACCTCGCGATCTGGCAGCAGCTGCTACTGCCGGTCGCCACGGAGTTCCAACCGGAGCTAATAATCGTGTCGGCTGGTTATGATTCTGCCCTGGGCGACGAAAAGGGCTGTATGGAAATAACGCCCGCGTTCTACTCGCACCTGCTCAGCCCGCTGCTGCTGATGGCGCAGGGGCGCGTCGCCGTCGTCCTGGAGGGTGGCTACTGTCTCGAGTCGCTTGCCGAGGGCTGCGCGCTCACGCTCAAGACGCTGCTCGGCGATCCGGCCCCACGGCTGGCGGAAGCGCTGCAGCCCCCGTCCGAGAGCATGCAGGCGTCCATCCTGAACTGCATCTACAGCCACCGGAAGTACTGGAAGTGTTTGCAGCTGTACGAGCTATACGACCTGGAGGACTACAACAACACCAACCCGCAGGACAACTTCCACAAGGTGATCAAATGCTACGTGCCGCCGGAACCGCCGGCCCAGCCCGGGCGGTACGAGACGCGCAACTGCTACCCGGTGCAGTCGGCGGACGAGCGCGCCCGCATCCAGGAACGGCTGGGCCGGCTGCACCTCGCCACCGATCTGAGCTTCCCGCCCGACCGCGTCTGCTACGTGTACGACGAGCTGATGCTCGAGCACCGCAACAGTGCGGAAAAGTGGCACCCGGAGCAGCCGGAGCGCATCGCGAAGATCATGCAGCGGCTGACCGGGGACTACCAGCTGGCGCAGCGCATGAAGCGGCTGCCGGGCCGGCTCGCCACCACCGAGGAGCTGTGTCTGGTGCACGGGCCGGAGCACGTGCGCCTGATCGGCGAGGTGTGCCAGTCGAGCACGATGAAGCAGACGGCCGACCAGTACAACTCGATCTACTTCCACCCGAGCACGGACGCGAGCGCCCGCATGGCGACCGGCTCGGTGCTGACCGTGGTGGAGGACGTGCTGGAGGGCCGCACCCTGTCGGGCGTTGTGCGTGGTGCTCCCGCCCGGCCACCACG]
[-] EMBL AGA285929 [CACGCGCTCGACCATCTCGGCACGCAGAAGATACTGATCGTCGACTGGGACGTGCACCACGGGCAGGGCACGCAGCGGATGTTCTCCTCCGATCCGAGGGTGCTGTACTTCTCCATCCATCGGTACGAGCACGGCACGTTCTGGCCGAACCTGCGCGAGTCCGACTTTGACTACGTCGGCACCGGCAAGGGCGAGGGGTACAACTTCAACGTGCCGCTCAACAAGACGGGCATGACCAACGGCGACTACCTCGCGATCTGGCAGCAGCTGCTACTGCCGGTCGCCACGGAGTTCCAACCGGAGCTAATAATCGT ]
[+] EMBL BM649607 [ ccgCCGGCAAGGGCGAGGGGTACAACTTCAACGTGCCGCTCAACAAGACGGGCATGACCAACGGCGACTACCTCGCGATCTGGCAGCAGCTGCTACTGCCGGTCGCCACGGAGTTCGCTCCCGAGCTGATTATCGTGTCGGCTGGTTATGATTCTGCCCTGGGCGACGAAAAGGGCTGTATGGAAATAACGCCCGCGTTCTACTCGCACCTGCTCAGCCCGCTGCTGCTGATGGCGCAGGGGCGCGTCGCCGTCGTCCTGGAGGGTGGCTACTGTCTCGAGTCGCTTGCCGAGGGCTGCGCGCTCACGCTCAAGACGCTGCTCGGCGATCCGGCCCCACGGCTGGCGGAAGCGCTGCAGCCCCCGTCCGAGAGCATGCAGGCGTCCATCCTGAACTGCATCTACAGCCACCGGAAGTACTGGAAGTGTTTGCAGCTGTACGAGCTATACGACCTGGAGGACTACAACAACACCAACCCGCAGGACAACTTCCACAAGGTGATCAAATGCTACGTGCCGCCGGAACCGCCGGCCCAGCCCGGGCGGTACGAGACGCGCAACTGCTACCCGGTGCAGTCGGCGGACGAGCGCGCCCGCATCCAGGAACGGCTGGGCCGGCTGCACCTCGCCACCG ]
[+] EMBL BM590161 [ ccGTGCAGTCGGCGGACGAGCGCGCCCGCATCCAGGACCGGCTGGCCCGGCTGCACCTCGCCACCGATCTGAGCTTCCCGCCCGACCGCGTCTGCTACGTGTACGACGAGCTGATGCTCGAGCACCGCAACAGTGCGGAAAAGTGGCACCCGGAGCAGCCGGAGCGCATCGCGAAGATCATGCAGCGGCTGACCGGGGACTACCAGCTGGCGCAGCGCATGAAGCGGCTGCCGGGCCGGCTCGCCACCACCGAGGAGCTGTGTCTGGTGCACGGGCCGGAGCACGTGCGCCTGATCGGCGAGGTGTGCCAGTCGAGCACGATGAAGCAGACGGCCGACCAGTACAACTCGATCTACTTCCACCCGAGCACGGACGCGAGCGCCCGCATGGCGACCGGCTCGGTGCTGACCGTGGTGGAGGACGTGCTGGAGGGCCGCACCCTGTCGGGCGTTGTGCGTGGTGCTCCCGCCCGGCCACCACG]
consensusID : consensus_5066#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CCGGGGGGCCGGCGGCGACCAGCGCCGCAGCTCCGACTTTACCGAGGTGCAGCTGAAGGACATCTTCCAGAACGCGCAGAGCGGGGCGCGGACGGTGCGCGGCCCCACCGGCATCCTGTACGACGAGCGGTTCGCGCTGCACCGCTGCCTGTGGGACACCAACTATCCGGAGTGCCCGGAGCGGTACCTGCGCGTGATGGAGCGCTTCACGATCGGGCAGCTGGTCGACCGGTGCCAGTTCGTAGCGCCCCGGCCGGCCACCCGGGCCGAGCTGCTGACCAAGCACACGGCCGAGCAGATCGAGCTGCTGGCGCAAACGCACGGCTCGCAGGACGAGCCCGAGCTGGAGCGGCTGAGCTCGCACTACGACGCCATCTTCATCCATCCGACGTCGTACGAAACGAGCGTGCTGGCGGTCGGCAGCACGATCCAGCTGGTCGAGAGCGTGTGGAGCGGGACGGTGCAGAACGGGATGGCGATACTTCGGCCGCCCGGCCACCACGCGATGACCGCCGAGTACAATGGGTACTGCTTCTTCAACAACGTGGGCGATCGCAGCCCAGCACGCGCTCGACCATCTCGGCACGCAGAAGAT]
[+] EMBL BM595843 [CCGGGGGGCCGGCGGCGACCAGCGCCGCAGCTCCGACTTTACCGAGGTGCAGCTGAAGGACATCTTCCAGAACGCGCAGAGCGGGGCGCGGACGGTGCGCGGCCCCACCGGCATCCTGTACGACGAGCGGTTCGCGCTGCACCGCTGCCTGTGGGACACCAACTATCCGGAGTGCCCGGAGCGGTACCTGCGCGTGATGGAGCGCTTCACGATCGGGCAGCTGGTCGACCGGTGCCAGTTCGTAGCGCCCCGGCCGGCCACCCGGGCCGAGCTGCTGACCAAGCACACGGCCGAGCAGATCGAGCTGCTGGCGCAAACGCACGGCTCGCAGGACGAGCCCGAGCTGGAGCGGCTGAGCTCGCACTACGACGCCATCTTCATCCATCCGACGTCGTACGAAACGAGCGTGCTGGCGGTCGGCAGCACGATCCAGCTGGTCGAGAGCGTGTGGAGCGGGACGGTGCAGAACGGGATGGCGATACTTCGGCCGCCCGGCCACCACGCGATGACCGCCGAGTACAATGGGTACTGCTTCTTCAACAACGTGGGCGATCGCAGCCCAGCACGCGCTCGACCATCTCGGCACGCAGAAGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5066#0 CACGCGCTCGACCATCTCGGCACGCAGAAGATACTGATCGTCGACTGGGACGTGCACCAC 60
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GGGCAGGGCACGCAGCGGATGTTCTCCTCCGATCCGAGGGTGCTGTACTTCTCCATCCAT 120
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 CGGTACGAGCACGGCACGTTCTGGCCGAACCTGCGCGAGTCCGACTTTGACTACGTCGGC 180
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 ACCGGCAAGGGCGAGGGGTACAACTTCAACGTGCCGCTCAACAAGACGGGCATGACCAAC 240
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GGCGACTACCTCGCGATCTGGCAGCAGCTGCTACTGCCGGTCGCCACGGAGTTCCAACCG 300
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GAGCTAATAATCGTGTCGGCTGGTTATGATTCTGCCCTGGGCGACGAAAAGGGCTGTATG 360
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GAAATAACGCCCGCGTTCTACTCGCACCTGCTCAGCCCGCTGCTGCTGATGGCGCAGGGG 420
consensus_5066#1 ------------------------------------------------------CCGGGG 6
* ****
consensus_5066#0 CGCGTCGCCGTCGTCCTGGAGGGTGGCTACTGTCTCGAGTCGCTTGCCGAGGGCTGCGCG 480
consensus_5066#1 GGC--CGGCGGCGACCAGCGCCGCAGCT-CCGACTTTACCGAGGTGC----AGCTGAAGG 59
** ** ** ** ** * * *** * * ** * *** **** *
consensus_5066#0 CTCACGCTCAAGACGCTGCTCGGCGATCCGGCCCCACGGCTGGCGGAAGCGCTGCAGCCC 540
consensus_5066#1 ACATCTTCCAGAACGC-GCAGAGCGGGGCG--CGGACGGTGCGCGGCCCCACCGGCATCC 116
* ** **** ** *** ** * **** **** * * * **
consensus_5066#0 CCGTCCGAGAGCATGCAGGCGTCCATCCTGAACTGCATCTACAGCCACCGGAAGTACTGG 600
consensus_5066#1 TGTACGACGAGCG-------GTTCGCGCTGCACCGCTGCCTGTGGGACACCAACTATCCG 169
* **** ** * *** ** ** * * ** ** ** *
consensus_5066#0 AAGTGTTTGCAGCTGTACGAGCTATACGACCTGGAGGACTACAACAACACCAACCCGCAG 660
consensus_5066#1 GAGTGCCCGGAGCGGTAC---CTGCGCGTGATGGAGCGCTTCACGATCGGGCAGCTGGTC 226
**** * *** **** ** ** ***** ** ** * * * * *
consensus_5066#0 GACAACTTCCA---CAAGGTGATCAAATGCTACGTGCCGCCGGAACCGCCGGCCCAGCCC 717
consensus_5066#1 GACCGGTGCCAGTTCGTAGCGCCCCGGCCGGCCACCCGGGCCGAGCTGCTGACCAAGCAC 286
*** * *** * * * * * * * * ** * ** * ** *** *
consensus_5066#0 G-GGCGGTACGAGACGCGCAACTGCTACCCGGTGCAGTCGGCGGACGAG-CGCGCCCGCA 775
consensus_5066#1 ACGGCCGAGCAGATCG---AGCTGCTGGCGCAAACGCACGGCTCGCAGGACGAGCCCGAG 343
*** * * ** * ***** * * **** * * ** *****
consensus_5066#0 TCCAGGAACGGCTGGGCCGGCTGCACCTCGCCACCGATCTGAGCTTCCCGCCCGACCGCG 835
consensus_5066#1 CT--GGAGCGGCTGAGCT---CGCACTACGACGCCATCTTCA----TCCATCCGACGTCG 394
*** ****** ** **** ** * ** * * ** ***** **
consensus_5066#0 TCTGCTACGTGTACGACGAGCTGATGCTCGAGCACCGCAACAGTGCGGAAAAGTGGCACC 895
consensus_5066#1 TACGAAACGAG-----CGTGCTGGCGGTCG-GCAGCACGATCCAGCTGGTCGAGAGCGTG 448
* * *** * ** **** * *** *** * * * ** * **
consensus_5066#0 CGGAGCAGC-CGGAGCGCATCGCGAAGATCATGCAGCGGCTGACCGGGGACTACCAGCTG 954
consensus_5066#1 TGGAGCGGGACGGTGCAGAACGGGATGGCGATACTTCGGCCGCCCGGCCACCACGCGATG 508
***** * *** ** * ** ** * ** * **** * **** ** ** * **
consensus_5066#0 GCGCAGCGCATGAAGCGGCTGCCGGGCCGGCTCGCCACCACCGAGGAGCTGTGTCTGGTG 1014
consensus_5066#1 AC-CGCCGAGTACAATGGGTACTG--CTTCTTCAACAACGTGGGCGATCGCAGCCCAG-- 563
* * ** * * ** * * * * ** ** * * ** * * * *
consensus_5066#0 CACGGGCCGGAGCACGTGCGCCTGATCGGCGAGGTGTGCCAGTCGAGCACGATGAAGCAG 1074
consensus_5066#1 CACGCGCTCGACCATCTCGGCACG--CAG-AAGAT------------------------- 595
**** ** ** ** * ** * * * ** *
consensus_5066#0 ACGGCCGACCAGTACAACTCGATCTACTTCCACCCGAGCACGGACGCGAGCGCCCGCATG 1134
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GCGACCGGCTCGGTGCTGACCGTGGTGGAGGACGTGCTGGAGGGCCGCACCCTGTCGGGC 1194
consensus_5066#1 ------------------------------------------------------------
consensus_5066#0 GTTGTGCGTGGTGCTCCCGCCCGGCCACCACG 1226
consensus_5066#1 --------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||