cluster # 51

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 51 cluster # 51 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_51#0 length = 611 sequences # 1

consensus_51#1 length = 573 sequences # 1

consensusID : consensus_51#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 611
fasta sequence

                              [CCGCCCACGCGTCCGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTCGAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGCGCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCAGGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCTGTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCCAGAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGAGCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGCGGCCAATCTGCTCATCCCGGAAGACGGCACCGGGCCACTGAACCGACCCAACACGGCCCTCTTCTGCACCATCCTCACGCTCGGCACGTTCTCGCTGGCCTACTATCTGAAGCTGTTCCGCAACTCCCACTTTCCTGGGGCGTAACGCTCGCCGTGCCCTCGGTGACTTCGGTGTGCCGATCTCGATCGCGCTGTTCG]

[+] EMBL BM630234             [CCGCCCACGCGTCCGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTCGAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGCGCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCAGGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCTGTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCCAGAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGAGCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGCGGCCAATCTGCTCATCCCGGAAGACGGCACCGGGCCACTGAACCGACCCAACACGGCCCTCTTCTGCACCATCCTCACGCTCGGCACGTTCTCGCTGGCCTACTATCTGAAGCTGTTCCGCAACTCCCACTTTCCTGGGGCGTAACGCTCGCCGTGCCCTCGGTGACTTCGGTGTGCCGATCTCGATCGCGCTGTTCG]




>consensus_51#0
CCGCCCACGCGTCCGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTCGAACGAC
TTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGCGCTGGTT
GTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCAGGAAATC
TTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCTGTCCGTG
TACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCCAGAGCCG
CTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGAGCTGCTG
GCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGCGGCCAAT
CTGCTCATCCCGGAAGACGGCACCGGGCCACTGAACCGACCCAACACGGCCCTCTTCTGC
ACCATCCTCACGCTCGGCACGTTCTCGCTGGCCTACTATCTGAAGCTGTTCCGCAACTCC
CACTTTCCTGGGGCGTAACGCTCGCCGTGCCCTCGGTGACTTCGGTGTGCCGATCTCGAT
CGCGCTGTTCG

consensusID : consensus_51#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence

                              [CCGGTTCGGGGGGCTGTCCTCGGACAAGACGCACAACCTGATCGGCATCTCGGAAACGCTCGTGTCGGCCTCGATGGTGGGGCTGGTGTTTCATCTGCTCGCGGGACAGCCGTTGGTCATTATCGGGACGACGGGGCCGCTGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTCGAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGCGCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCAGGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCTGTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCCACAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGAGCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGCGGCCAATCTGCTCATCCCGGAAGACGGCACCGG]

[+] EMBL BM648075             [CCGGTTCGGGGGGCTGTCCTCGGACAAGACGCACAACCTGATCGGCATCTCGGAAACGCTCGTGTCGGCCTCGATGGTGGGGCTGGTGTTTCATCTGCTCGCGGGACAGCCGTTGGTCATTATCGGGACGACGGGGCCGCTGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTCGAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGCGCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCAGGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCTGTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCCACAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGAGCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGCGGCCAATCTGCTCATCCCGGAAGACGGCACCGG]




>consensus_51#1
CCGGTTCGGGGGGCTGTCCTCGGACAAGACGCACAACCTGATCGGCATCTCGGAAACGCT
CGTGTCGGCCTCGATGGTGGGGCTGGTGTTTCATCTGCTCGCGGGACAGCCGTTGGTCAT
TATCGGGACGACGGGGCCGCTGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTC
GAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGC
GCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCA
GGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCT
GTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCC
ACAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGA
GCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGC
GGCCAATCTGCTCATCCCGGAAGACGGCACCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_51#0      ------------------------------------------------------------
consensus_51#1      CCGGTTCGGGGGGCTGTCCTCGGACAAGACGCACAACCTGATCGGCATCTCGGAAACGCT 60
                                                                                

consensus_51#0      ------------------------------------------------------------
consensus_51#1      CGTGTCGGCCTCGATGGTGGGGCTGGTGTTTCATCTGCTCGCGGGACAGCCGTTGGTCAT 120
                                                                                

consensus_51#0      -------CCGCCCACGCGTCCGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTC 53
consensus_51#1      TATCGGGACGACGGGGCCGCTGCTGCTGTTCGATGAAGCGCTGAACCAGTTCTGCATCTC 180
                            ** *   **  * ***************************************

consensus_51#0      GAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGC 113
consensus_51#1      GAACGACTTCAGCTTTCTCACGGTGCGGGTGTACGTGGGGTGCTGGCTGGCGGTGATTGC 240
                    ************************************************************

consensus_51#0      GCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCA 173
consensus_51#1      GCTGGTTGTGTCCGCGTTCGAGGGCAGCGTGTACGTGCGGCTGTTCACGCGCTTCACGCA 300
                    ************************************************************

consensus_51#0      GGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCT 233
consensus_51#1      GGAAATCTTCTCCGCGCTCATCACGCTGATCTACATCGTCGAGACGGTGATGAAGCTGCT 360
                    ************************************************************

consensus_51#0      GTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCC 293
consensus_51#1      GTCCGTGTACAAGCGTCATCCCCTGTTGGCGGAGTACCTGTACAAGAACGTCACCGAGCC 420
                    ************************************************************

consensus_51#0      AGAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGA 353
consensus_51#1      ACAGCCGCTCCCGATGCCCTACCTGGAGGAGGAGCGCAACGGAACGACTCCCACCTCCGA 480
                    * **********************************************************

consensus_51#0      GCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGC 413
consensus_51#1      GCTGCTGGCCGAGAGTCTAACAACGGCCGTGAACGGTACGATCGCAATGGCACAGGACGC 540
                    ************************************************************

consensus_51#0      GGCCAATCTGCTCATCCCGGAAGACGGCACCGGGCCACTGAACCGACCCAACACGGCCCT 473
consensus_51#1      GGCCAATCTGCTCATCCCGGAAGACGGCACCGG--------------------------- 573
                    *********************************                           

consensus_51#0      CTTCTGCACCATCCTCACGCTCGGCACGTTCTCGCTGGCCTACTATCTGAAGCTGTTCCG 533
consensus_51#1      ------------------------------------------------------------
                                                                                

consensus_51#0      CAACTCCCACTTTCCTGGGGCGTAACGCTCGCCGTGCCCTCGGTGACTTCGGTGTGCCGA 593
consensus_51#1      ------------------------------------------------------------
                                                                                

consensus_51#0      TCTCGATCGCGCTGTTCG 611
consensus_51#1      ------------------