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Anopheles gambiae
cluster # 5119 cluster # 5119       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5119#0 length = 1220 sequences # 1  
consensus_5119#1 length = 1059 sequences # 2  
consensus_5119#2 length = 708 sequences # 1  

consensusID : consensus_5119#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1220
fasta sequence
                              [CACAATTGCCCCAGGTTTTGCAGGGTGGATCGATCGATCATCGATCGATTATGGTGGTGAACACAAGTCAGTNAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGCAAACGTCGATCGATAACCGTTATCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCCTTCCCCTTGTGTGTTGTTGCCACATATGCCATTAGCCAATCAGTCGTNCCAGCGATCAGTCATTGTCAGCTCAGGCAGTTGGCAATTNCAGGCACGCATGCATGCCGTGGTGTGCACTCCCCGCGGTGTCATAGCATCCCTACNTCATGTCACAATTGTCCCAAACACCAANGTTCACGCATCGCATTCCTAACACCACACAGCACCACCAAAACACCCACACACACCGCATGCCATATGTCACGGCACGCGTCACAAGCAACACCACACACCACCACACGTCCAAGCCACCCACANTTTCCCCGCCCCAGCGCCACAGTGTTGTCCAAGGTCAAGCGCGCATTCCGNCGCCCAACAGGCACACAGCCCATCACCGACCCCAGCAGCCCNTCGCGGTCACACCCATAGGCGGTTNCCTTATNCTNTCATCTATNCCTCTATANTCCCCTAGGNCGCTTATTCATCAACCCATCTTAGGTCAGNATCCANNCACANGNTTAGCCAGCGAGCACGTACTCCATTCACCATTGGTGGCCACACCGCCAATCTNGGCACANACCTTCCCCGGCNANACCGGGTTCAATAGGTTAGGNGCACGGGGGCTTNNTAGGGTTACAACGGGGGTTAGNCACACCACAAGCCAATTCANCTACAAAACCAAACAATATACCCCCACATATACCGGAACCGGCTTCCGTANAATACANCCCGGACGTTTCACGGAGCTTACAACTAAGGNTACTGGGGACAACTGNAATACGCAAAGGGNAAATACCAACATTTNTCATAACACAGCATACCTTTCNTTCGACACTAACTACATCTAGACTTCCCCTGCACGGTTTTANACAACCCATTATTAAAGGGTACGTAGTCGAAAACAGNTACACACAACAAAACGGGGGCACAAAGCACATTANTTAACCGTTACCGGTCTNTTGCCACCTCTANGGTACGGGCCATGCGNGGCATTCTAATCATTAACCTCTCCACTAGGTACCGGGACACTTGACGCAACCATTCCNNGCAACGGAA]

[+] EMBL AL693197             [CACAATTGCCCCAGGTTTTGCAGGGTGGATCGATCGATCATCGATCGATTATGGTGGTGAACACAAGTCAGTNAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGCAAACGTCGATCGATAACCGTTATCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCCTTCCCCTTGTGTGTTGTTGCCACATATGCCATTAGCCAATCAGTCGTNCCAGCGATCAGTCATTGTCAGCTCAGGCAGTTGGCAATTNCAGGCACGCATGCATGCCGTGGTGTGCACTCCCCGCGGTGTCATAGCATCCCTACNTCATGTCACAATTGTCCCAAACACCAANGTTCACGCATCGCATTCCTAACACCACACAGCACCACCAAAACACCCACACACACCGCATGCCATATGTCACGGCACGCGTCACAAGCAACACCACACACCACCACACGTCCAAGCCACCCACANTTTCCCCGCCCCAGCGCCACAGTGTTGTCCAAGGTCAAGCGCGCATTCCGNCGCCCAACAGGCACACAGCCCATCACCGACCCCAGCAGCCCNTCGCGGTCACACCCATAGGCGGTTNCCTTATNCTNTCATCTATNCCTCTATANTCCCCTAGGNCGCTTATTCATCAACCCATCTTAGGTCAGNATCCANNCACANGNTTAGCCAGCGAGCACGTACTCCATTCACCATTGGTGGCCACACCGCCAATCTNGGCACANACCTTCCCCGGCNANACCGGGTTCAATAGGTTAGGNGCACGGGGGCTTNNTAGGGTTACAACGGGGGTTAGNCACACCACAAGCCAATTCANCTACAAAACCAAACAATATACCCCCACATATACCGGAACCGGCTTCCGTANAATACANCCCGGACGTTTCACGGAGCTTACAACTAAGGNTACTGGGGACAACTGNAATACGCAAAGGGNAAATACCAACATTTNTCATAACACAGCATACCTTTCNTTCGACACTAACTACATCTAGACTTCCCCTGCACGGTTTTANACAACCCATTATTAAAGGGTACGTAGTCGAAAACAGNTACACACAACAAAACGGGGGCACAAAGCACATTANTTAACCGTTACCGGTCTNTTGCCACCTCTANGGTACGGGCCATGCGNGGCATTCTAATCATTAACCTCTCCACTAGGTACCGGGACACTTGACGCAACCATTCCNNGCAACGGAA]


>consensus_5119#0 CACAATTGCCCCAGGTTTTGCAGGGTGGATCGATCGATCATCGATCGATTATGGTGGTGA ACACAAGTCAGTNAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGCAAACGTCGA TCGATAACCGTTATCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCC ATCCCTTCCCCTTGTGTGTTGTTGCCACATATGCCATTAGCCAATCAGTCGTNCCAGCGA TCAGTCATTGTCAGCTCAGGCAGTTGGCAATTNCAGGCACGCATGCATGCCGTGGTGTGC ACTCCCCGCGGTGTCATAGCATCCCTACNTCATGTCACAATTGTCCCAAACACCAANGTT CACGCATCGCATTCCTAACACCACACAGCACCACCAAAACACCCACACACACCGCATGCC ATATGTCACGGCACGCGTCACAAGCAACACCACACACCACCACACGTCCAAGCCACCCAC ANTTTCCCCGCCCCAGCGCCACAGTGTTGTCCAAGGTCAAGCGCGCATTCCGNCGCCCAA CAGGCACACAGCCCATCACCGACCCCAGCAGCCCNTCGCGGTCACACCCATAGGCGGTTN CCTTATNCTNTCATCTATNCCTCTATANTCCCCTAGGNCGCTTATTCATCAACCCATCTT AGGTCAGNATCCANNCACANGNTTAGCCAGCGAGCACGTACTCCATTCACCATTGGTGGC CACACCGCCAATCTNGGCACANACCTTCCCCGGCNANACCGGGTTCAATAGGTTAGGNGC ACGGGGGCTTNNTAGGGTTACAACGGGGGTTAGNCACACCACAAGCCAATTCANCTACAA AACCAAACAATATACCCCCACATATACCGGAACCGGCTTCCGTANAATACANCCCGGACG TTTCACGGAGCTTACAACTAAGGNTACTGGGGACAACTGNAATACGCAAAGGGNAAATAC CAACATTTNTCATAACACAGCATACCTTTCNTTCGACACTAACTACATCTAGACTTCCCC TGCACGGTTTTANACAACCCATTATTAAAGGGTACGTAGTCGAAAACAGNTACACACAAC AAAACGGGGGCACAAAGCACATTANTTAACCGTTACCGGTCTNTTGCCACCTCTANGGTA CGGGCCATGCGNGGCATTCTAATCATTAACCTCTCCACTAGGTACCGGGACACTTGACGC AACCATTCCNNGCAACGGAA



consensusID : consensus_5119#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1059
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGTAAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGGACAGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAGGACAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGGTGTGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATGAT---GTCGTGGACTCCCCCGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGATCTTACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGCAGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTGTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCTTATAATGTGAACGAATGAAACTCCGAACGTATGTGGAGGGTTTGTAAGGGTGAAAAGATACTAACAAATTCCAATTCGAGGTCGATACCGCTTCCCGTTAATAGTTGGTTCTTGTTTTGTATCACTTTTTAAGTCTTTTTTTATTTTTCTCCTGCGTTACACATTTTGTTTTTACATAAACAACGGCAAACAATATACGTACGTCTGCTCTTTGTCGGATGCGGATTTATATACTCATGGTCGGAACTGAGCAAATTCCGAAACGACATCCCACAACAACATCATCTCCATCCGAAGTAGCGATCACCAATGGCGGCGCGAGATCCAGTACGAACGGTACGAACAGAACCGATTCTGATTGACGGCTCGAGCACGAGTCCGACTATTTGAAGCGAGAAT]

[+] EMBL BM629104             [CCGCCCACGCGTCCGCCCACGCGTCCGTAAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGGACAGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAGGACAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGGTGTGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATGAT   GTCGTGGACTCCCCCGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGATCTTACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGCAGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTGTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCTTATAATGTG                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM609516             [                                                                                                                                                                                                                                                                                                                                                                                   ccGCACAGTCGTCCCGCGTAGTATATAGTCGGAGTGGAATTAGACGATGATGCCGTGGTGGACTCCCCCGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGATCTAACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACATACACACAGTAAGCAGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTGTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCTTATAATGTGAACGAATGAAACTCCGAACGTATGTGGAGGGTTTGTAAGGGTGAAAAGATACTAACAAATTCCAATTCGAGGTCGATACCGCTTCCCGTTAATAGTTGGTTCTTGTTTTGTATCACTTTTTAAGTCTTTTTTTATTTTTCTCCTGCGTTACACATTTTGTTTTTACATAAACAACGGCAAACAATATACGTACGTCTGCTCTTTGTCGGATGCGGATTTATATACTCATGGTCGGAACTGAGCAAATTCCGAAACGACATCCCACAACAACATCATCTCCATCCGAAGTAGCGATCACCAATGGCGGCGCGAGATCCAGTACGAACGGTACGAACAGAACCGATTCTGATTGACGGCTCGAGCACGAGTCCGACTATTTGAAGCGAGAAT]


>consensus_5119#1 CCGCCCACGCGTCCGCCCACGCGTCCGTAAAAACATATACTTGGCGGAGTTTTTGATTCT GATCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGG ACAGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAG GACAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTC AGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTC ATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGG TGTGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATG ATGTCGTGGACTCCCCCGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGAT CTTACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGC AGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCA TCGGTAAAATGCGTTCTGTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCT TATAATGTGAACGAATGAAACTCCGAACGTATGTGGAGGGTTTGTAAGGGTGAAAAGATA CTAACAAATTCCAATTCGAGGTCGATACCGCTTCCCGTTAATAGTTGGTTCTTGTTTTGT ATCACTTTTTAAGTCTTTTTTTATTTTTCTCCTGCGTTACACATTTTGTTTTTACATAAA CAACGGCAAACAATATACGTACGTCTGCTCTTTGTCGGATGCGGATTTATATACTCATGG TCGGAACTGAGCAAATTCCGAAACGACATCCCACAACAACATCATCTCCATCCGAAGTAG CGATCACCAATGGCGGCGCGAGATCCAGTACGAACGGTACGAACAGAACCGATTCTGATT GACGGCTCGAGCACGAGTCCGACTATTTGAAGCGAGAAT



consensusID : consensus_5119#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 708
fasta sequence
                              [CACTGCTGCAAATTCCCAAGGCTGATAAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGGACAGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAGGACAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGGTGTGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATGATGCCGTGGTGGACTCCCGGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGATCTAACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGCAGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTTTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCTTATAATGTGAACGATTGAAACTCCGAACGTATGTGGAGGGTTTGTAAG]

[+] EMBL BX623993             [CACTGCTGCAAATTCCCAAGGCTGATAAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGGACAGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAGGACAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGGTGTGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATGATGCCGTGGTGGACTCCCGGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGATCTAACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGCAGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTTTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCTTATAATGTGAACGATTGAAACTCCGAACGTATGTGGAGGGTTTGTAAG]


>consensus_5119#2 CACTGCTGCAAATTCCCAAGGCTGATAAAAACATATACTTGGCGGAGTTTTTGATTCTGA TCCGCAGTTCATCCGAGCTACAGCCGCTGCTCGAATCGGTACAGAAGGACTCATCCGGAC AGTCGAACAACAATATCGATGGGCGGGATACGTCGATGGATCAAAGCTAGGTGGAAAGGA CAAAGAAGCGCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAG AACGCAAGCATAACCCATCTCGCTGTTGATCGTTGAAACGTCGATCGATAACCGTTTCAT GCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGCCATCCTTCCCTTGTGGTG TGCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGTCGGAGTGGAATTAGACGATGAT GCCGTGGTGGACTCCCGGGGATGATCCTCTATGTAATGTCCAACACAACGTACGATCGAT CTAACAAAACACAAACAAAAACGATGATGTAGGACGGTAAGAAACAAACACACAGTAAGC AGAATTTCCGCCAGCGAAGGTGTAAGTAGGGATTCGGCAAGGAAAGCATACGACCAGGCA TCGGTAAAATGCGTTCTTTTTTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAGGCT TATAATGTGAACGATTGAAACTCCGAACGTATGTGGAGGGTTTGTAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5119#1      ------------------------------------------------------------
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      CACAATTGCCCCAGGTTTTGCAGGGTGGATCGATCGATCATCGATCGATTATGGTGGTGA 60
                                                                                  

consensus_5119#1      ----------------------------------CCGCCCACGCGTCCGCCCACGCGTCC 26
consensus_5119#2      -----------------------------------CACTGCTGCAAATTCCCAAG-GCTG 24
consensus_5119#0      ACACAAGTCAGTNAGAACGCAAGCATAACCCATCTCGCTGTTG-ATCGTTGCAAACGTCG 119
                                                         * *    *        **   *   

consensus_5119#1      GT--AAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGA----GC 80
consensus_5119#2      AT--AAAAACATATACTTGGCGGAGTTTTTGATTCTGATCCGCAGTTCATCCGA----GC 78
consensus_5119#0      ATCGATAACCGTTATCATGCCATGATTGCTGTCCCCGCACCCCTCCTCGCCTACCATCGC 179
                       *  * ** * *   * ** *    **  **   * *  ** *   **  *       **

consensus_5119#1      TACAGCCGCTGCTCGAAT-----CGGTACAGAAGGACTCATCCGGACAGTCGAAC-AACA 134
consensus_5119#2      TACAGCCGCTGCTCGAAT-----CGGTACAGAAGGACTCATCCGGACAGTCGAAC-AACA 132
consensus_5119#0      CATCCCTTCCCCTTGTGTGTTGTTGCCACATATGCCATTAGCCAATCAGTCGTNCCAGCG 239
                       *   *  *  ** *  *      *  *** * *   * * **   ******  * * * 

consensus_5119#1      AT-ATCGATGGGCGGGATACGTCGATGG--ATCAAAGCTAGGTGGAAAGGACAAAGAAGC 191
consensus_5119#2      AT-ATCGATGGGCGGGATACGTCGATGG--ATCAAAGCTAGGTGGAAAGGACAAAGAAGC 189
consensus_5119#0      ATCAGTCATTGTCAGCTCAGGCAGTTGGCAATTNCAGGCACGCATGCATGCCGTGGT-GT 298
                      ** *   ** * * *   * *  * ***  **   **  * *     * * *   *  * 

consensus_5119#1      GCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGC 251
consensus_5119#2      GCAAGGTGGATGATGATGATGATGATGATGGTGGTGAACACAAGTAGTCAGAACGCAAGC 249
consensus_5119#0      GCACTCCCCGCGGTG-TCATAGCATCCCTACNTCATGTCACAATTGTCCCAAACACCAAN 357
                      ***        * ** * **        *         ***** *   *  *** * *  

consensus_5119#1      ATA-ACCCATCTCGCTGTTGAT------------CGTTGAAACGTCGATCGATAAC---C 295
consensus_5119#2      ATA-ACCCATCTCGCTGTTGAT------------CGTTGAAACGTCGATCGATAAC---C 293
consensus_5119#0      GTTCACGCATCGCATTCCTAACACCACACAGCACCACCAAAACACCCACACACACCGCAT 417
                       *  ** **** *  *  * *             *    ****  * *   * * *    

consensus_5119#1      GTTTCATGCCATGATTGCTGTCCC-----------CGCACCCCTCCTCGCCTA--CCATC 342
consensus_5119#2      GTTTCATGCCATGATTGCTGTCCC-----------CGCACCCCTCCTCGCCTA--CCATC 340
consensus_5119#0      GCCATATGTCACGGCACGCGTCACAAGCAACACCACACACCACCACACGTCCAAGCCACC 477
                      *    *** ** *      *** *           * **** *  * ** * *  *** *

consensus_5119#1      GCCATCCTTCCC-TTGTGGTGT-GCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGT 400
consensus_5119#2      GCCATCCTTCCC-TTGTGGTGT-GCAATTGCATGCACAGTCGTCCCGCGTAGTATGTAGT 398
consensus_5119#0      CACANTTTCCCCGCCCCAGCGCCACAGTGTTGTCCAAGGTCAAGC-GCGCATTCCGNCGC 536
                        **   * ***      * *   ** *    * **  ***   * *** * *  *  * 

consensus_5119#1      CGGAGTGGAAT-TAGACGATGAT--GTCGTG--GACTCCCCCGGGATGATCCTCTATGTA 455
consensus_5119#2      CGGAGTGGAAT-TAGACGATGAT--GCCGTGGTGGACTCCCGGGGATGATCCTCTATGTA 455
consensus_5119#0      CCAACAGGCACACAGCCCATCACCGACCCCAGCAGCCCNTCGCGGTCACACCCATAGGCG 596
                      *  *  ** *   ** * ** *     *            *  **     **  ** *  

consensus_5119#1      ATGTCCA-ACACAACGTACGATC-------GATCTTACAAAACACAAACAAAAACGATGA 507
consensus_5119#2      ATGTCCA-ACACAACGTACGATC-------GATCTAACAAAACACAAACAAAAACGATGA 507
consensus_5119#0      GTTNCCTTATNCTNTCATCTATNCCTCTATANTCCCCTAGGNCGCTTATTCATCAACCCA 656
                       *  **  *  *      * **          **    *   * *  *   *       *

consensus_5119#1      TGT-AGGACGGTAAG-AAACAAACACACAGTAAGC-AGAATTTCCGCCAGCGAAGGTGTA 564
consensus_5119#2      TGT-AGGACGGTAAG-AAACAAACACACAGTAAGC-AGAATTTCCGCCAGCGAAGGTGTA 564
consensus_5119#0      TCTTAGGTCAGNATCCANNCACANGNTTAGCCAGCGAGCACGTACTCCATTCAC--CATT 714
                      * * *** * * *   *  ** *     **  *** ** *  * * ***   *     * 

consensus_5119#1      AGTAGGGAT-TCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTGT---T 620
consensus_5119#2      AGTAGGGAT-TCGGCAAGGAAAGCATACGACCAGGCATCGGTAAAATGCGTTCTTT---T 620
consensus_5119#0      GGTGGCCACACCGCCAATCTNGGCACAN-ACCTTCCCCGGCNANACCGGGTTCAATAGGT 773
                       ** *  *   ** ***     *** *  ***   *   *  * *  * ****  *   *

consensus_5119#1      TTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAG-GCTTATAATGTGAACGAATGAA 679
consensus_5119#2      TTTCTTTTCCGGCGTTATACATTGTTTCAAAAGTGAG-GCTTATAATGTGAACGATTGAA 679
consensus_5119#0      TAGGNGCACGGGGGCTTNNTAGGGTTACAACGGGGGTTAGNCACACCACAAGCCAATTCA 833
                      *       * ** * *    *  *** ***  * *       * *     * * * *  *

consensus_5119#1      ACTCCGAACGTATGTGGAGGGTTT----GTAAGGGTGAAAAGATACTAACAAATTCCAAT 735
consensus_5119#2      ACTCCGAACGTATGTGGAGGGTTT----GTAAG--------------------------- 708
consensus_5119#0      NCTACAAAACCAAACAATATACCCCCACATATACCGGAACCGGCTTCCGTANAATACANC 893
                       ** * **   *                 **                             

consensus_5119#1      TCGA--GGTCGATACCGCTTCCCGTTAATAGTTGGTTCTTGTTTTGTATCACTTTTTAAG 793
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      CCGGACGTTTCACGGAGCTTACAACTAAGGNTACTGGGGACAACTGNAATACGCAAAGGG 953
                                                                                  

consensus_5119#1      TCTTTTTTTATTTTTCTCCTGCGTTACACATTTTGTTTTTACATAAACAACGGCAAACAA 853
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      NAAATACCAACATTTNTCATAACACA-GCATACCTTTCNTTCGACACTAACTACATCTAG 1012
                                                                                  

consensus_5119#1      TATACGTACGTCTGCTCTTTGTCGGATGCGGATTTATATACTCATGGTCGGAACTGAGCA 913
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      ACTTCCCCTGCACGGTTTTANACAACCCATTATTAAAGGGTACGTAGTCGAAAACAGNTA 1072
                                                                                  

consensus_5119#1      AATTCCGAAACGACATCCCACAACA-ACATCATCTCCATCCGAAGTAGCGATCACCAATG 972
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      CACACAACAAAACGGGGGCACAAAGCACATTANTTAACCGTTACCGGTCTNTTGCCACCT 1132
                                                                                  

consensus_5119#1      GCGGCGCGAGATCCAGTACGAACGGTACGAACAGAACCGATTCTGATTGACGGCTCGAGC 1032
consensus_5119#2      ------------------------------------------------------------
consensus_5119#0      CTANGGTACGGGCCATGCGNGGCATTCTAATCATTAACCTCTCCACTAGGTACCGGGACA 1192
                                                                                  

consensus_5119#1      ACGAGTCCGACTATTTGAAGCGAGAAT- 1059
consensus_5119#2      ----------------------------
consensus_5119#0      CTTGACGCAACCATTCCNNGCAACGGAA 1220
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)