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Anopheles gambiae
cluster # 5127 cluster # 5127       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5127#0 length = 876 sequences # 4  

consensusID : consensus_5127#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 876
fasta sequence
                              [CTGCTCGCTGTGCCTAATCGCTGGCAGTGCAAGAAAG-AAACTCCGACCGAGCCCGGCAGGCGTAGATGACTTGGTAGCTTCAAACGATATCAAACGGGCACCGAACCGATAGCAAAAATAAGTGAAAAAAGCAGAACGGGAGAGTTGCTTGTTATCAGGTCCAGAAAAAGGAAAAGAAAAATCACTGAAAGTTTGCACTTTTGCCCAGTGGTGGCGAGTACACACACACACCCAGACAGATAGAGGCGCGTGTGACAGTATTTGCGTGTTGGCGGACAGTTTTCGTTCGCAGTTCAGCCGGCCTCGGACACTCTCCTGTGTGCGCTGTGCTTTATTGCCTTGCCGTTATGGCCCGTAACGGCAGCCAGTGTGTCCATAACACTCCGCTGGTCATTTAGGGCACATCCATTTCCGGCCGGTGTTCCAATAT-CCTTACACCATCGGCCACGGTTCCGGAGGAT-GGCGTAAGGTAGAGACGAAAACGACCACGCAG-GAAACTGGGTGGTGATGTTCGGCCGATTCGCTGCGTGAGAACGTGAGCTGAAGAGCCTGGTCCGAATTACCCCTGGCGAGCAAGCAGGGATTCGCAACGACCTCCTTAAAGCAGTCAGCCTACCTATCAAGGAATGGATATTCAACCCATGGGCTGGTGCTAAATTGCTGCGGATTGTGTTGAGGAGGATTGTCAGCAAGAGGATCTGGAGCAATCACGCTGAACGAGCAGACCTGCTAATAGCGTCACCAGCGTCTCCAGGAAATCCCTGCGTTAGGTCCTATCGTGTTAATTAATATGTAATTTAGACGACGAAACATTGAAATAAACAAAAACTCAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGTTG]

[+] EMBL CNS08KFK             [CTGCTCGCTGTGCCTAATCGCTGGCAGTGCAAGAAAG AAACTCCGACCGAGCCCGGCAGGCGTAGATGACTTGGTAGCTTCAAACGATATCAAACGGGCACCGAACCGATAGCAAAAATAAGTGAAAAAAGCAGAACGGGAGAGTTGCTTGTTATCAGGTCCAGAAAAAGGAAAAGAAAAATCACTGAAAGTTTGCACTTTTGCCCAGTGGTGGCGAGTACACACACACACCCAGACAGATAGAGGCGCGTGTGACAGTATTTGCGTGTTGGCGGACAGTTTTCGTTCGCAGTTCAGCCGGCCTCGGACACTCTCCTGTGTGCGCTGTGCTTTATTGCCTTGCCGTTATGGCCCGTAACGGCAGCCAGTGTGTCCATAACACTCCGCTGGTCATTTAGGGCACATCCATTTCCGGCCGGTGTTCCAATAT CCTTACACCATCGGCCACGGTTCCGGAGGAT GGCGTAAGGTAGAGACGAAAACGACCACGCAG GAAACTGGGTGGTGATGTTCGGCCGATTCGCTGCGTGAGAACGTGAGCTGAAGAGCCTGGTCCGAATTACGCCTGGCGAGCAAGCAGGGATTCGCAACGACCTCCTTAAAGCAGTGAGCCTACCTATCAAGGAATGGATATTCAACCCATGGGCTGGTGCTAAATTGCTGCGGATTGTGTTGAGGAGGATTGTCAGCAAGAGGATCTGGAGCAATCACGCTGAACGAGCAGACCTGCTAATAGCGTCACCAGCGTCTCCAGGAAATCCCTGCGTTAGGTCCTATCGTGTTAATTAATATGTAATTTAGACGACGAAACATTGAAATAAACAAAAACTCAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGTTG]
[+] EMBL CNS08RV5             [CTGCTCGCTGTGCCTAATCGCTGGCAGTGCAAGAAAGAAAACTCCGACCGAGCCCGGCAGGCGTTGCTGACTTGGTAGCTTCAAACGATATCAAACGGGCACCGAACCGATAGCAAAAATAAGTGAAAAAAGCAGAACGGGAGAGTTGCTTGTTATCAGGTCCAGAAAAAGGAAAAGAAAAATCACTGAAAGTTTGCACTTTTGCCCAGTGGTGGCGAGTACACACACACACCCAGACAGATAGAGGCGCGTGTGACAGTATTTGCGTGTTGGCGGACAGTTTTCGTTCGCAGTTCAGCCGGCCTCGGACACTCTCCTGTGTGCGCTGTGCTTTATTGCCTTGCCGTTATGGCCCGTAACGGCAGCCAGTGTGTCCATAACACTCCGCTGGTCATTTAGGGCACATCCATTTCCGGCCGGTGTTCCAATATCCCTTACACCATCGGCCACGGTTCCGGAGGATGGGCGTAAGGTAGAGACGAAAACGACCAC                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08KFL             [                                                                                                                                                                                                                                                                                                                                                                   GTAACGGCAGCCAGTGTGTCCATAAAACTCCCCTGGTCATTTAGGGTACATCCATTTCCGGCCGGTGTTCCAATAT CCTTACACCATCGGCCACGGTTCCGGAGGAT GGCGTAAGGTAGAGACGAAAACGACCACGCAGTGGAA TGGGTGGTGATGTTCGGCCGATTCGCTGCGTGAGAACGTGAGCTGAAGAGCCTGGTCCG ATTACCCCTGGCGAGCAAGCAGGGATTCGCAACGACCTCCTTAAAGCAGTCAGCCTACCTATCAAGGAATGGATATTCAACCCATGGGCTGGTGCTAAATTGCTGCGGATTGTGTTGAGGAGGATTGTCAGCAAGAGGATTTGGAGCAATCACGCTGAACGAGCAGACCTGCTAATAGCGTCACCAGCGTCTCCAGGAAATCCCTGCGTTAGGTCCTATCGTGTTAATTAATATGTAATTTAGACGACGAAACATTGAAATAAACAAAAACTCA                                            ]
[-] EMBL CNS08RV6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCCCTGGCGAGCAAGCAGGGATTCGCAACGACCTCCTTAAAGCAGTCAGCCTACCTATCAAGGAATGGATATTCAACCCATGGGCTGGTGCTAAAAAGCTGCGG                                                                                                                                                                                                                  ]


>consensus_5127#0 CTGCTCGCTGTGCCTAATCGCTGGCAGTGCAAGAAAGAAACTCCGACCGAGCCCGGCAGG CGTAGATGACTTGGTAGCTTCAAACGATATCAAACGGGCACCGAACCGATAGCAAAAATA AGTGAAAAAAGCAGAACGGGAGAGTTGCTTGTTATCAGGTCCAGAAAAAGGAAAAGAAAA ATCACTGAAAGTTTGCACTTTTGCCCAGTGGTGGCGAGTACACACACACACCCAGACAGA TAGAGGCGCGTGTGACAGTATTTGCGTGTTGGCGGACAGTTTTCGTTCGCAGTTCAGCCG GCCTCGGACACTCTCCTGTGTGCGCTGTGCTTTATTGCCTTGCCGTTATGGCCCGTAACG GCAGCCAGTGTGTCCATAACACTCCGCTGGTCATTTAGGGCACATCCATTTCCGGCCGGT GTTCCAATATCCTTACACCATCGGCCACGGTTCCGGAGGATGGCGTAAGGTAGAGACGAA AACGACCACGCAGGAAACTGGGTGGTGATGTTCGGCCGATTCGCTGCGTGAGAACGTGAG CTGAAGAGCCTGGTCCGAATTACCCCTGGCGAGCAAGCAGGGATTCGCAACGACCTCCTT AAAGCAGTCAGCCTACCTATCAAGGAATGGATATTCAACCCATGGGCTGGTGCTAAATTG CTGCGGATTGTGTTGAGGAGGATTGTCAGCAAGAGGATCTGGAGCAATCACGCTGAACGA GCAGACCTGCTAATAGCGTCACCAGCGTCTCCAGGAAATCCCTGCGTTAGGTCCTATCGT GTTAATTAATATGTAATTTAGACGACGAAACATTGAAATAAACAAAAACTCAAAAGTGAA AAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGTTG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)