Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5270 cluster # 5270       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5270#0 length = 1025 sequences # 4  
consensusID : consensus_5270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1025
fasta sequence 
                              [AGGGCTCTTTGGCACTTTGCAGCAGTGTTGGTTCCAACTGTAAATCCTGATTGTTTTTAATGAGTGTTGTAGTTATACTTCCCCGTTTGTTAATTGTTTTGCATTGCAAAAAAAAAAACAGCGAACTCGAATTAGATAAAAGAGCAGCAAATCGGTGTATCGGTTACGTCCTTCCAATGCGAATTGTTATTAAAAATCCTATTGACTGTATTCCCTATTTCGTGTTCGTAACAAAGAGCTGACAGAGCCTGAATATTTATCGTGACTTGTTTTAAAAACGGCTCTCCTACCCCCTCCAAAGGAGAGCAACGTTTTGCTGCAACGCAACCAAACTGAGACAAAGGTTTGCCGTATTTTGATATAATTGTTGTTGGTGATAATACGTACGATTTTTGAATCGTCATTG-TTTTTTTTTCTCAAAATCTGTGTAAAAGAATGTGTTTTTTTTTCTCTGCCTAATAGAAACGAAAGCTAATGGATAGCGCCAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGACCCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTGTAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTTCCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATTTCCTGTCGGGGTTAGCTCCGTTCTTTCAACGAGTACGACGCATTACCATTCTCATGCAGCAGCATTTTTTTGTCTTGGTCTTCAAAGTTTAGTTTTTAATAAGTTACTTTTATTACTAGCAACGATATGCATACATATTATATTACATATAAAAAGCTACACAACCGATTCAGTATCCGACATACATGATGTATTTAATAGTATTTTTGCTTTTTGCGCACTTAGGGTAAATAGTTTACTGTGTGTTTCTTTTTTTATAGCAGCAATTTTTGTATTTTTTTGTATTTCTTTTTATCCAACCATCTTCTT]

[+] EMBL BX613539             [AGGGCTCTTTGGCACTTTGCAGCAGTGTTGGTTCCAACTGTAAATCCTGATTGTTTTTAATGAGTGTTGTAGTTATACTTCCCCGTTTGTTAATTGTTTTGCATTGCAAAAAAAAAAACAGCGAACTCGAATTAGATAAAAGAGCAGCAAATCGGTGTATCGGTTACGTCCTTCCAATGCGAATTGTTATTAAAAATCCTATTGACTGTATTCCCTATTTCGTGTTCGTAACAAAGAGCTGACAGAGCCTGAATATTTATCGTGACTTGTTTTAAAAACGGCTCTCCTACCCCCTCCAAAGGAGAGCAACGTTTTGCTGCAACGCAACCAAACTGAGACAAAGGTTTGCCGTATTTTGATATAATTGTTGTTGGTGATAATACGTACGATTTTTGAATCGTCATTGTTTTTTTTTTCTCAAAATCTGTGTAAAAGAATGTGTTTTTTTTTCTCTGCCTAATAGAAACGAAAGCTAATGGATAGCGCCAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGACCCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTGTAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTTCCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATTTCCTGTCGGGGTTAGCTCCGTTCTTTCAACGAGTACGACGCATTACCAT                                                                                                                                                                                                                                                                    ]
[+] EMBL BX616126             [                       AGTGTTGGTTCCAACTGTAAATCCTGATTGTTTTTAATGTGTGTTGTAGTTATACTTCCCCGTTTGTTAATTGTTTTGCATTGCAAAAAAAAAAACAGCGAACTCGAATTAGATAAAAGAGCAGCAAATCGGTGTATCGGTTACGTCCTTCCAATGCGAATTGTTATTAAAAATCCTATTGACTGTATTCCCTATTTCGTGTTCGTAACAAAGAGCTGACAGAGCCTGAATATTTATCGTGACTTGTTTTAAAAACGGCTCTCCTACCCCCTCCAAAGGAGAGCAACGTTTTGCTGCAACGCAACCAAACTGAGACAAAGGTTTGCCGTATTTTGATATAATTGTTGTTGGTGATAATACGTACGATTTTTGAATCGTCATTG TTTTTTTTTCTCAAAATCTGTGTAAAAGAATGTGTTTTTTTTTCTCTGCCTAATAGAAACGAAAGCTAATGGATAGCGCCAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGACCCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTGTAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTTCCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX627816             [                           TTGGTTCCAACTGTAAATCCTGATTGTTTTTAATGAGTGTTGTAGTTATACTTCCCCGTTTGTTAATTGTTTTGCATTGCAAAAAAAAAAACAGCGAACTCGAATTAGATAAAAGAGCAGCAAATCGGTGTATCGGTTACGTCCTTCCAATGCGAATTGTTATTAAAAATCCTATTGACTGTATTCCCTATTTCGTGTTCGTAACAAAGAGCTGACAGAGCCTGAATATTTATCGTGACTTGTTTTAAAAACGGCTCTCCTACCCCCTCCAAAGGAGAGCAACGTTTTGCTGCAACGCAACCAAACTGAGACAAAGGTTTGCCGTATTTTGATATAATTGTTGTTGGTGATAATACGTACGATTTTTGAATCGTCATTG TTTTTTTTTCTCAAAATCTGTGTAAAAGAATGTGTTTTTTTTTCTCTGCCTAATAGAAACGAAAGCTAATGGATAGCGCCAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGACCCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTGTAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTTCCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATTTCCTGTCGGGGTTAGCTCCGTTCTTTCAACGAGTACGACGCATTACCATTCTCATGCAGCAGCATTTTTTTGTCTTGGTCTT                                                                                                                                                                                                                                   ]
[+] EMBL BX608801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACGAAAGCTAATGGATAGCGCTAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGACCCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTGTAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTTCCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATTTCCTGTCGGGGTTAGCTCCGTTCTTTCAACGAGTACGACGCATTACCATTCTCAT   GCAGCATTTTTTTGTCTTGTTCTTCAAAGTTTAGTTTTTAATAAGTTACTTTTATTACTAGCAACGATATGCATACATATTATATTACATATAAAAAGCTACACAACCGATTCAGTATCCGACATACATGATGTATTTAATAGTATTTTTGCTTTTTGCGCACTTAGGGTAAATAGTTTACTGTGTGTTTCTTTTTTTATAGCAGCAATTTTTGTATTTTTTTGTATTTCTTTTTATCCAACCATCTTCTT]




>consensus_5270#0
AGGGCTCTTTGGCACTTTGCAGCAGTGTTGGTTCCAACTGTAAATCCTGATTGTTTTTAA
TGAGTGTTGTAGTTATACTTCCCCGTTTGTTAATTGTTTTGCATTGCAAAAAAAAAAACA
GCGAACTCGAATTAGATAAAAGAGCAGCAAATCGGTGTATCGGTTACGTCCTTCCAATGC
GAATTGTTATTAAAAATCCTATTGACTGTATTCCCTATTTCGTGTTCGTAACAAAGAGCT
GACAGAGCCTGAATATTTATCGTGACTTGTTTTAAAAACGGCTCTCCTACCCCCTCCAAA
GGAGAGCAACGTTTTGCTGCAACGCAACCAAACTGAGACAAAGGTTTGCCGTATTTTGAT
ATAATTGTTGTTGGTGATAATACGTACGATTTTTGAATCGTCATTGTTTTTTTTTCTCAA
AATCTGTGTAAAAGAATGTGTTTTTTTTTCTCTGCCTAATAGAAACGAAAGCTAATGGAT
AGCGCCAGATAAACCGATCACGAGCAGCGAAGGGTGTAAAAGAAGTGAGGCGAAAACGAC
CCACTCAAAAGAGGGTAGAGAAAGCGAGCAAAGAGAGACCTAGAGACGACGTGAAATGTG
TAGTAAGACGGGTTTTTGATTTGCATTCGTTACTTATTTGGTTCTTTTTTTTTTAACTTT
CCGTTCCATAATAGGTACTTACGCTTGTACTTTTCTTACATATTTAACAAATGATTTCCT
GTCGGGGTTAGCTCCGTTCTTTCAACGAGTACGACGCATTACCATTCTCATGCAGCAGCA
TTTTTTTGTCTTGGTCTTCAAAGTTTAGTTTTTAATAAGTTACTTTTATTACTAGCAACG
ATATGCATACATATTATATTACATATAAAAAGCTACACAACCGATTCAGTATCCGACATA
CATGATGTATTTAATAGTATTTTTGCTTTTTGCGCACTTAGGGTAAATAGTTTACTGTGT
GTTTCTTTTTTTATAGCAGCAATTTTTGTATTTTTTTGTATTTCTTTTTATCCAACCATC
TTCTT

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)