Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5327 cluster # 5327       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5327#0 length = 1389 sequences # 4  
consensusID : consensus_5327#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1389
fasta sequence 
                              [CCNGGCTTCAGCTTAGATATGCAATCATCGTTAATAATGAATCNNTAAAGAGTGTACTGCACGTAAGGATGCATCCGGAAACAGAGATTAACAAAAAAAAACAAAAAAAAAAGAAAACAAAAGAATGTTACACCAAACTACCAATCAACAGATCTCTGCTAAAAGCAGAAGGTATACAGATTCGTTCGTTGAAATTGAATTTATTTGGTGAGATACAAAGCACAACCGATACACGATACAATAAATGCCATCAATTTCGTTACTCATTGCATCACAACAGCAAACGTGTGAACCATCCACGACGTTGGTAATTTTTTTCCGTTCTAGCAGTGTGTGCGTGTGTGTTACAATAAAACGAACGGCAAGTGTGCGAAGCGAATGTGCAAATTTTTATCTATCAGTGTTGTCATGTATTGCCGTATTCAACGAACCAAAGACACAAATTCTATTTGACATACTAAGACGTTTAATCCGAGTGTAAAAGAGAGTACTACTTACAATGATAGTATAACGAGCCACTTTACCACGTTAGTT-ATNTGATTAT-ATTAA-TGTTAA-CAAGTGCCACACCAG-ACACAACTACACAACCACACATAAACACGAGCAAGAGGGAGTACAACAGTAACAACCAAAACAACCAACCAACCAATCGAAACAGTAGACCTAGAGCAATAGAGTTTATAAGAGAATGTTTTGACTTAACGGATCACTTTCAACTCGATGTTCTAAATATTTCACTATTGCTGTGTTCAATACAGCTTCAAGAAAACTCTGTCCAAAAGCTGCTCCCGCTGCCACGAACGAGCGAATCTTACACGGGGAAAAAGTGTATTAGACGGGGAAACGTAAAAATCAAAAACGGAATTTACTCTAGACTTTGTGTCCTGGGGCAGGGACCGGAACGGTTGGGCAGGGCGGATGTAGAAGCGTATCTAGTTAAGAGACTCACTTACACGAACACACACACATACACCATCACACACCATTACACAAACTCTTGTCACGGACGGTTTAGTTGTCCCGCGCATCACGAATATATGCGATCAAGATCTTCATCATCATCGTGACCATTACGACGATTGTCTA-TTTTTCTCACGTTACTTACATTTTCATGATCCACTCGGAATGTTTAATGGTTGATGGACAACAGATAAAATCAAAGTATATTATGCAAAAAGGTGCAAAGATATTACACAGAGGATTACACATACAGAAAACAGAAAAGTATATAGATATATATTAACGACGTTGAGCGAAAGGCAGAGCCTAGCAAGCAAGTGTCATTGTTATAATAGAGTAGAAAGCGCACAATAGAAAGGAAGTGCAGTGTTAGTTTGTGGAGGCCAAAAAGAAATGATTGGAAGGAATGGAAGGGATGACAGGGGGAAATAG]

[+] EMBL AL931034             [CCNGGCTTCAGCTTAGATATGCAATCATCGTTAATAATGAATCNNTAAAGAGTGTACTGCACGTAAGGATGCATCCGGAAACAGAGATTAACAAAAAAAAACAAAAAAAAAAGAAAACAAAAGAATGTTACACCAAACTACCAATCAACAGATCTCTGCTAAAAGCAGAAGGTATACAGATTCGTTCGTTGAAATTGAATTTATTTGGTGAGATACAAAGCACAACCGATACACGATACAATAAATGCCATCAATTTCGTTACTCATTGCATCACAACAGCAAACGTGTGAACCATCCACGACGTTGGTAATTTTTTTCCGTTCTAGCAGTGTGTGCGTGTGTGTTACAATAAAACGAACGGCAAGTGTGCGAAGCGAATGTGCAAATTTTTATCTATCAGTGTTGTCATGTATTGCCGTATTCAACGAACCAAAGACACAAATTCTATTTGACATACTAAGACGTTTAATCCGAGTGTAAAAGAGAGTACTACTTACAATGATAGTATAACGAGCCACTTTACCACGTTAGTTCATNTGATTATCATTAACTGTTAACCAAGTGCCACACCAG ACACAACTACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX626545             [                                                                                                                                                                                                                                                                                                                              CCGCTCTAGCAGTGTGTGCGTGTGTGTTACAATAAAACGAACGGCAAGTGTGCGAAGCGAATGTGCAAATTTTTATCTATCAGTGTTGTCATGTATTGCCGTATTCAACGAACCAAAGACACAAATTCTATTTGACATACTAAGACGTTTAATTCGAGTGTAAAAGAGAGTACTACTTACAATGATAGTATAACGAGCCACTTTACCACGTTAGTT ATTTGATTAT ATTAA TGTTAA CAAGTGCCACACCAGCACACAACTACACAACCACACATAAACACGAGCAAGAGGGAGTACAACAGTAACAACCAAAACAACCAACCAACCAATCGAAACAGTAGACCTAGAGCAATAGAGTTTATAAGAGAATGTTTTGACTTAACGGATCACTTTCAACTCGATGTTCTAAATATTTCACTATTGCTGTGTTCAATACAGCTTCAAGAAAACTCTGTCCAAAAGCTGCTCCCGCTGCCACGAACGAGCGAATCTTACACGGGGAAAAAGTGTATTAGACGGGGAAACGTAAAAATCAAAAACGGAATTTACTCTAGACTTTGTGTCCTGGGGCAGGGACCGGAACGGTTGGGCAGGGCGGATGTAGAAGCGTATCTAGTTAAGAGACTCACTTACACGAACACACACACATACACCATCACACACCATTACACAAACTCTTGTCACGGACGGGTTAGTTGTCCCGCGCATCACGAATATATGCGATCNAGATCTTCATCATCATCGTGACCATTACGACGATTGNCTATTTTTTCTCACGTTACTTACATTTTC TGATCCACTCNG ATGGTTTATGGGTGATG                                                                                                                                                                                                                                                          ]
[+] EMBL BX615639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAACTCTGTCCAAAAGCTGCTCCCGCTGCCACGAACGAGCGAATCTTACATGGGGAAAAAGTGTATTAGACGGGGAAACGTAAAAATCAAAAACGGAATTTACTCTAGACTTTGTGTCCTGGGGCAGGGACCGGAACGGTTGGGCAGGGCGGATGTAGAAGCGTATCTAGTTAAGAGACTCACTTACACGAACACACACACATACACCATCACACACCATTACACAAACTCTTGTCACGGACGGTTTAGTTGTCCCGCGCATCACGAATATATGCGATCAAGATCTTCATCATCATCGTGACCATTACGACGATTGTCTA TTTTTCTCACGTTACTTACATTTTCATGATCCACTCGGAATGTTTAATGGTTGATGGACAACAGATAAAATCAAAGTATATTATGCAAAAAGGTGCAAAGATATTACACAGAGGATTACACATACAGAAAACAGAAAAGTATATAGATATATATTAACGACGTTGAGCGAAAGGCAGAGCCTAGCAAGCAAGTGTCATTGTTATAATAGAGTAGAAAGCGCACAATAGAAAGGAAGTGCAGTGTTAGTTTGTGGAGGCCAAAAAGAAATGATTGGAAGGAATGGAAGGGATGACAGGGGGAAATAG]
[+] EMBL BX614881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGGAAAAAGTGTATTAGACGGGGAAACGTAAAAATCAAAAACGGAATTTACTCTAGACTTTGTGTCCTGGGGCAGGGACCGGAACGGTTGGGCAGGGCGGATGTAGAAGCGTATCTAGTTAAGAGACTCACTTACACGAACACACACACATACACCATCACACACCATTACACAAACTCTTGTCACGGACGGTTTAGTTGTCCCGCGCATCACGAATATATGCGATCAAGATCTTCATCATCATCGTGACCATTACGACGATTGTCTA TTTTTCTCACGTTACTTACATTTTCATGATCCACTCGGAATGTTTAATGGTTGATGGACAACAGATAAAATCAAAGTATATTATGCAAAAAGGTGCAAAGATATTACACAGAGGATTACACATACAGAAAACAGAAAAGTATATAGATATATATTAACGACGTTGAGCGAAAGGCAGAGTCTAGCAAGCAAGTGTCATTGTTATAATAGAGAAGAAAGCGCACAATAGAAAGGAAGTGCAGTGTTAGTTTGTGGAGGCCAAAAAGAAATGATTGGAAGGAATGGAAGGAATGACAGGGGGAA    ]




>consensus_5327#0
CCNGGCTTCAGCTTAGATATGCAATCATCGTTAATAATGAATCNNTAAAGAGTGTACTGC
ACGTAAGGATGCATCCGGAAACAGAGATTAACAAAAAAAAACAAAAAAAAAAGAAAACAA
AAGAATGTTACACCAAACTACCAATCAACAGATCTCTGCTAAAAGCAGAAGGTATACAGA
TTCGTTCGTTGAAATTGAATTTATTTGGTGAGATACAAAGCACAACCGATACACGATACA
ATAAATGCCATCAATTTCGTTACTCATTGCATCACAACAGCAAACGTGTGAACCATCCAC
GACGTTGGTAATTTTTTTCCGTTCTAGCAGTGTGTGCGTGTGTGTTACAATAAAACGAAC
GGCAAGTGTGCGAAGCGAATGTGCAAATTTTTATCTATCAGTGTTGTCATGTATTGCCGT
ATTCAACGAACCAAAGACACAAATTCTATTTGACATACTAAGACGTTTAATCCGAGTGTA
AAAGAGAGTACTACTTACAATGATAGTATAACGAGCCACTTTACCACGTTAGTTATNTGA
TTATATTAATGTTAACAAGTGCCACACCAGACACAACTACACAACCACACATAAACACGA
GCAAGAGGGAGTACAACAGTAACAACCAAAACAACCAACCAACCAATCGAAACAGTAGAC
CTAGAGCAATAGAGTTTATAAGAGAATGTTTTGACTTAACGGATCACTTTCAACTCGATG
TTCTAAATATTTCACTATTGCTGTGTTCAATACAGCTTCAAGAAAACTCTGTCCAAAAGC
TGCTCCCGCTGCCACGAACGAGCGAATCTTACACGGGGAAAAAGTGTATTAGACGGGGAA
ACGTAAAAATCAAAAACGGAATTTACTCTAGACTTTGTGTCCTGGGGCAGGGACCGGAAC
GGTTGGGCAGGGCGGATGTAGAAGCGTATCTAGTTAAGAGACTCACTTACACGAACACAC
ACACATACACCATCACACACCATTACACAAACTCTTGTCACGGACGGTTTAGTTGTCCCG
CGCATCACGAATATATGCGATCAAGATCTTCATCATCATCGTGACCATTACGACGATTGT
CTATTTTTCTCACGTTACTTACATTTTCATGATCCACTCGGAATGTTTAATGGTTGATGG
ACAACAGATAAAATCAAAGTATATTATGCAAAAAGGTGCAAAGATATTACACAGAGGATT
ACACATACAGAAAACAGAAAAGTATATAGATATATATTAACGACGTTGAGCGAAAGGCAG
AGCCTAGCAAGCAAGTGTCATTGTTATAATAGAGTAGAAAGCGCACAATAGAAAGGAAGT
GCAGTGTTAGTTTGTGGAGGCCAAAAAGAAATGATTGGAAGGAATGGAAGGGATGACAGG
GGGAAATAG

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)