Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5480 cluster # 5480       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5480#0 length = 989 sequences # 4  

consensusID : consensus_5480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 989
fasta sequence
                              [CCGCGCGTGTGCAAGCAAACGGTCGAGAAACCGTCGTCGTCGTCGTCGTGCCTGTGTCTGGTAGCGAGCGAGTGATCAAAAACAGTGAACAAAAAAAGTTCAGGAAGATATCCA-CGGCTCCCTCCGTCAAATCCGTGGCTTGGTTAAGGTTTCTGTTTCCTTTCCGCTTACTTCCCCACTACTTCCTCCATTGTGTGCTGTAGTGCTGGGAGCGTGTGTGTGTGTGTGTTTAAATGCACTTTGCGAATCCCCAGCGAGACCAACTAACACGATGCGCGATGTAATCTGCTGAGCGAGTGAGCAGTACAGTGACTGTGTGTGAGTGTGTGTGTATTCAAGGTTAAAGGAAGACACACGGGAAAACGGCACCGCGGGTTGGGTGCAGTCGAGGATACTGG-AATTTCCCGTCGGCGCAGGCAGTCATCATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAGAGCAACAGTGCAGTAGGTTTGCTTTCGGTTCGCGTTCAAACACAAATGTTCCACTTTCATCAACTGCTGCGGCATGTTTCAGGACTCCACCACCACACCACCACGCTCCAGCATGCCCTGAAAGCGCAGCAGCAGCAGCGCCGCCAGTTCGGTAGCGGCGCGCGGGAACAGC-TGCGCCGCGTGCTCGTCGTGTCGAAGCTGACCCGGCTCGAGTTTGAAAAGATCCGCGAGGAGCAGCTGAGCGACGAGTGTCTGGAGCAGAGGATCCGCGACCGGAGCACCGACTACGACGCGCTCAAGTACTACCACCACCTGCACAAGGACGTCGAGCGGCAGGTGGTGCGATCGTTCCAGCAGCACGGCATCGAGGTGCAGGTGGTGAACCGGATCACCATCCACAAGGACGCGCTGCAGTGGGCCGACCTGATCGTACCGATCGGGGGCGATGGGACGTTCCTGCTGGCGGCCGGCCGGGCCAGCCCCTTCTTCCTGTCGAACGGGAAGAAAAC]

[+] EMBL BM646235             [CCGCGCGTGTGCAAGCAAACGGTCGAGAAACCGTAGTCGTCGTCGTCGT  C GTGCCTGGTAGCGAGCGAGTGATCAAAAACAGTGAACAGAAAAAGTTCAGGAAGATATCCACCGGC CCC CCGTCAAATCCGTGGCTTGGTTAAGGTTTCTGTTTCCTTTCCGCTTACTTCCCTAATACTTCCTCCACTGTGTGCTGCGGTGATGTGAGCGTGTGTGTGTGTGTGTTTAAATGCACTTTGCGAATCCCCAGCGAGACCAACTAACACGATGCGCGATGTAATCTGCTGAGCGAGTGAGCAGTACAGTGACTGTGTGTGA  GTGTGTGTATTCAAGGTTAAAGGAAGACACACGGGAAAACGGCACCGCGGGTTGGGTGCTGTGGAGGATACTGG AATTTCCCGTCGGCGCAGGCAGTCATAATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAGAGGAACAGTACAGTAGGTTTGCTTTCTGTTCGCGTTCAAACACAAATGTTCCACTTTCATCAACTGCTGCGGCATGTTGCAGGACTCCACCACCACACCACCACGCTCCAGCATGCCCTGAAAGC      GCAGCAGCGCCGCCAGTTCGGTAGCGGCGCGCGGGAACAGC TGCGCCG                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM637141             [           ccgGCAAACGGTCGAGAAACCGTCGTCGTCGTCGTCGTGCCTGTGTCTGGTAGCGAGCGAGTGATCAAAAACAGTGAACAAAAAAAGTTCAGGAAGATATCCA CGGCTCCCTCCGTCAAATCCGTGGCTTGGTTAAGGTTTCTGTTTCCTTTCCGCTTACTTCCCCACTACTTCCTCCATTGTGTGCTGTAGTGCTGGGAGCGTGTGTGTGTGTGTGTTTAAATGCACTTTGCGAATCCCCAGCGAGACCAACTAACACGATGCGCGATGTAATCTGCTGAGCGAGTGAGCAGTACAGTGACTGTGTGTGAGTGTGTGTGTATTCAAGGTTAAAGGAAGACACACGGGAAAACGGCACCGCGGGTTGGGTGCAGTCGAGGATACTGGAAATTTCCCGTCGGTGCAGGCAGTCATCATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAGAGCAACAGTGCAGTAGGTTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM577174             [                ccgCGGTCGAGAAACCGTCGTCGTCGTCGTCGTGCCTGTGTCTGGTAGCGAGCGAGTGATCAAAAACAGTGAACAAAAAAAGTTCAGGAAGATATCCA CGGCTCCCTCCGTCAAATCCGTGGCTTGGTTAAGGTTTCTGTTTCCTTTCCGCTTACTTCCCCACTACTTCCTCCATTGTGTGCTGTAGTGCTGGGAGCGTGTGTGTGTGTGTGTTTAAATGCACTTTGCGAATCCCCAGCGAGACCAACTAACACGATGCGCGATGTAATCTGCTGAGCGAGTGAGCAGTACAGTGACTGTGTGTGAGTGTGTGTGTATTCAAGGTTAAAGGAAGACACACGGGAAAACGGCACCGCGGGTTGGGTGCAGTCGAGGATACTGG AATTTCCCGTCGGTGCAGGCAGTCATCATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAGAGCAACAGTGCAGTAGGTTTGCTTTCGGTTCGCGTTCAAACACAAATGTTCCACTTTCATCAACTGCTGCGGCATGTTTCAGGACTCCACCACCACACCACTACGCTCCAGCATGCCCTGAAAGCGCAGCAGCAGCAGCGCCGCCAGTTCGGTAGCGGCGCGCGGGAACAGCATGCGCCGCGTGCTCGTCGTGTCGAAGCTGACCCGGCTCGAGTTT                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM605693             [                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAGGCAGTCATCATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAGAGCAACAGTGCAGTAGGTTTGCTTTCGGTTCGCGTTCAAACACAAATGTTCCACTTTCATCAACTGCTGCGGCATGTTTCAGGACTCCACCACCACACCACCACGCTCCAGCATGCCCTGAAAGCGCAGCAGCAGCAGCGCCGCCAGTTCGGTAGCGGCGCGCGGGAACAGC TGCGCCGCGTGCTCGTCGTGTCGAAGCTGACCCGGCTCGAGTTTGAAAAGATCCGCGAGGAGCAGCTGAGCGACGAGTGTCTGGAGCAGAGGATCCGCGACCGGAGCACCGACTACGACGCGCTCAAGTACTACCACCACCTGCACAAGGACGTCGAGCGGCAGGTGGTGCGATCGTTCCAGCAGCACGGCATCGAGGTGCAGGTGGTGAACCGGATCACCATCCACAAGGACGCGCTGCAGTGGGCCGACCTGATCGTACCGATCGGGGGCGATGGGACGTTCCTGCTGGCGGCCGGCCGGGCCAGCCCCTTCTTCCTGTCGAACGGGAAGAAAAC]


>consensus_5480#0 CCGCGCGTGTGCAAGCAAACGGTCGAGAAACCGTCGTCGTCGTCGTCGTGCCTGTGTCTG GTAGCGAGCGAGTGATCAAAAACAGTGAACAAAAAAAGTTCAGGAAGATATCCACGGCTC CCTCCGTCAAATCCGTGGCTTGGTTAAGGTTTCTGTTTCCTTTCCGCTTACTTCCCCACT ACTTCCTCCATTGTGTGCTGTAGTGCTGGGAGCGTGTGTGTGTGTGTGTTTAAATGCACT TTGCGAATCCCCAGCGAGACCAACTAACACGATGCGCGATGTAATCTGCTGAGCGAGTGA GCAGTACAGTGACTGTGTGTGAGTGTGTGTGTATTCAAGGTTAAAGGAAGACACACGGGA AAACGGCACCGCGGGTTGGGTGCAGTCGAGGATACTGGAATTTCCCGTCGGCGCAGGCAG TCATCATCAAACAGCTCGTCTTCTTAGTTCAAGTGCACCGAACAAGGGAACGAAACTAAG AGCAACAGTGCAGTAGGTTTGCTTTCGGTTCGCGTTCAAACACAAATGTTCCACTTTCAT CAACTGCTGCGGCATGTTTCAGGACTCCACCACCACACCACCACGCTCCAGCATGCCCTG AAAGCGCAGCAGCAGCAGCGCCGCCAGTTCGGTAGCGGCGCGCGGGAACAGCTGCGCCGC GTGCTCGTCGTGTCGAAGCTGACCCGGCTCGAGTTTGAAAAGATCCGCGAGGAGCAGCTG AGCGACGAGTGTCTGGAGCAGAGGATCCGCGACCGGAGCACCGACTACGACGCGCTCAAG TACTACCACCACCTGCACAAGGACGTCGAGCGGCAGGTGGTGCGATCGTTCCAGCAGCAC GGCATCGAGGTGCAGGTGGTGAACCGGATCACCATCCACAAGGACGCGCTGCAGTGGGCC GACCTGATCGTACCGATCGGGGGCGATGGGACGTTCCTGCTGGCGGCCGGCCGGGCCAGC CCCTTCTTCCTGTCGAACGGGAAGAAAAC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)