Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5507 cluster # 5507       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5507#0 length = 1211 sequences # 4  
consensusID : consensus_5507#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1211
fasta sequence 
                              [CCGTAATGATTACGAGTGAGCCTTTTCGAGAAGCGTCATGTAATGTTATTTAACGCGTTTTGGGTTTGTTTTGTTTTGTTTTTTTTTTCGTTTGCCACGGGAATAAGTATAAATATTTACGTTTCCCCTCCCACAGTCGATTATTCTAATTAATGCGCAAGTAGCGTTTTCTATCCATTATGAAAGTGAGTTAGATAGGTTAAGCGTGTGAATGATATGAGGGCAGTAGGCGTCGATTGCGATGCGATGAGGG--AAGGACATTTTCTTCCCTAAGCCTACTTCTGTTGCCAAGTACTAATGCAGAACAACAGAATGGTGATGCTGACACACACACAAACACACTTCTTTAGTCATAGAACACACCAACAAACACACACGTACACACGCCAAACGCTACATGAAAAGCGTGACATATGAGTTATTTATTTTGTTCAAGTTCAGTCATTTTTGTTTATTCACGCTGTTGTGATCAGATTAGAACCGAATCGATATTTGTTGGATGCGTTTTTTTTTGTTTTTTTTTTTTTTAATATTTAGTGTTTGTTTATCTTTTGTGTAAATTACTTTATAAAGTTTCACATAAATCAAATTTATGAATAAAATTAAAAAAAAAACAGGCATTTATGTATTTGCGCAGCACAAAAGAACAACACATACACAAAAACACACATATTCAACAAAGAGATGAAAACGAAAAGAAAAATAAAACGATTTTACAAACACAATAACGGGCAAAGGAGAGATAAAACAGCTCAACAGAAAGCAGAAAATCTCTACAAGCCATTCCAAGAACAACAATAACAATGGGCAAAGTGGAGCAAAATTCCCCTCCCCTGTGTTGGGGACGGGGGGAGGAACAACTCAGTGGCACTGGCACAGACAGAAGATTATCATGAAGCATTATTAGTTAACTTATAGCAGCAAAACCGAGGAACTATATTTAGCGCGAGCAAAGTGTGTGAAGGGGCATACGTATTAAGAAGGTAACAAAACAACAAAAAAAAAACAATACAAATCAGCACAGAAAAAATAATAAGATGCATGAATAGGGAAGAATATCCAAGCTGTTTCAGTCAGAAATGCGAACGTCAGTGTTGGTAGGAAGTTAAACAGTGGAGAAAAAAAAACATTCACCAGATGCTGAGATGGCAAAACAAAAAGTGGAAGTGAAAAAGTGAAAGTGAAAAACAGGAGGATGATTTAATAATAAT]

[+] EMBL BM578496             [CCGTAATGATTACGAGTGAGCCTTTTCGAGAAGCGTCATGTAATGTTATTTAACGCGTTTTGGGTTTGTTTTGTTTTGTTTTTTTTTTCGTTTGCCACGGGAATAAGTATAAATATTTACGTTTCCCCTCCCACAGTCGATTATTCTAATTAATGCGCAAGTAGCGTTTTCTATCCATTATGAAAGTGAGTTAGATAGGTTAAGCGTGTGAATGATATGAGGGCAGTAGGCGTCGATTGCGATGCGATGAGGG  AAGGACATTTTCTTCCCTAAGCCTACTTCTGTTGCCAAGTACTAATGCAGAACAACAGAATGGTGATGCTGACACACACACAAACACACTTCTTTAGTCATAGAACACACCAACAAACACACACGTACACACGCCAAACGCTACATGAAAAGCGTGACATATGAGTTATTTATTTTGTTCAAGTTCAGTCATTTTTGTTTATTCACGCTGTTGTGATCAGATTAGAACCGAATCGATATTTGTTGGATGCGTTTTTTTTTGTTTTTTTTTTTTTTAATATTTAGTGTTTGTTTATCTTTTGTGTAAATTACTTTATAAAGTTTCACATAAATCAAATTTATGAATAAAATTAAAAAAAAAACAGGCATTTATGTATTTGCGCAGCACAAAAGAACAACACATACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX603587             [                                        TAATGTTATTTAACGCGTTTTGGGTTTGTTTTGTTTTGTTTTTTTTTTCGTTTGCCACGGGAATAAGTATAAATATTTACGTTTCCCCTCCCACAGTCGATTATTCTAATTAATGCGCAAGTAGCGTTTTCTATCCATTATGAAAGTGAGTTAGATAGGTTAAGCGTGTGAATGATATGAGGGCAGTAGGCGTCGATTGCGATGCGATGAGGG  AAGGACATTTTCTTCCCTAAGCCTACTTCTGTTGCCAAGTACTAATGCAGAACAACAGAATGGTGATGCTGACACACACACAAACACACTTCTTTAGTCATAGAACACACCAACAAACACACACGTACACACGCCAAACGCTACATGAAAAGCGTGACATATGAGTTATTTATTTTGTTCAAGTTCAGTCATTTTTGTTTATTCACGCTGTTGTGATCAGATTAGAACCGAATCGATATTTGTTGGATGCGTTTTTTTTTG TTTTTTTTTTTTTAATATTTAGTGTTTGTTTATCTTTTGTGTAAATTACTTTATAAAGTTTCACATAAATCAAATTTATGAATAAAATTAAAAAAAAAACAGGCATTTATGTATTTGCGCAGCACAAAAGAACAACACATACACAAAAACACACATATTCAACAAAGAGATGAAAACGAAAAGAAAAATAAAACGATTTTACAAACACAATAACGGGCAAAGGAGAGATAAAACAGCTCAACAGAAAGCAGAAAATCTCTACAAGCCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX608718             [                                                                                                                                                  TAATTAATGCGCAAGTAGCGTTTTCTATCCATTATGAAAGTGAGTTAGATAGGTTAAGCGTGTGAATGATATGAGGGCAGTAGGCGTCGATTGCGATGCGATGAGGGAAAAGGACATTTTCTTCCCTAAGCCTACTTCTGTTGCCAAGTACTAATGCGGAACAACAGAATGGTGATGCTGACACACACACAAACACACTTCTTTAGTCATAGAACACACCAACAAACACACACATACACACGCCAAACGCTACATGAAAAGCGTGACATATGAGTTATTTATTTTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM639455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCTTTTGTGTAAATTACTTTATAAAGTTTCACATAAATCAAATTTATGAATA     AAAAAAAAAACAGGCATTTATGTATTTGCGCAGCACAAAAGAACAACACATACACAAAAACACACATATTCAACAAAGAGATGAAAACGAAAAGAAAAATAAAACGATTTTACAAACACAATAACGGGCAAAGGAGAGATAAAACAGCTCAACAG GAGCAGAAAATCTCTACAAGCCATTCCAAGAACAACAATAACAATGGGCAAAGTGGAGCAAAATTCCCCTCCCCTGTGTTGGGGACGGGGGGAGGAACAACTCAGTGGCACTGGCACAGACAGAAGATTATCATGAAGCATTATTAGTTAACTTATAGCAGCAAAACCGAGGAACTATATTTAGCGCGAGCAAAGTGTGTGAAGGGGCATACGTATTAAGAAGGTAACAAAACAACAAAAAAAAAACAATACAAATCAGCACAGAAAAAATAATAAGATGCATGAATAGGGAAGAATATCCAAGCTGTTTCAGTCAGAAATGCGAACGTCAGTGTTGGTAGGAAGTTAAACAGTGGAGAAAAAAAAACATTCACCAGATGCTGAGATGGCAAAACAAAAAGTGGAAGTGAAAAAGTGAAAGTGAAAAACAGGAGGATGATTTAATAATAAT]




>consensus_5507#0
CCGTAATGATTACGAGTGAGCCTTTTCGAGAAGCGTCATGTAATGTTATTTAACGCGTTT
TGGGTTTGTTTTGTTTTGTTTTTTTTTTCGTTTGCCACGGGAATAAGTATAAATATTTAC
GTTTCCCCTCCCACAGTCGATTATTCTAATTAATGCGCAAGTAGCGTTTTCTATCCATTA
TGAAAGTGAGTTAGATAGGTTAAGCGTGTGAATGATATGAGGGCAGTAGGCGTCGATTGC
GATGCGATGAGGGAAGGACATTTTCTTCCCTAAGCCTACTTCTGTTGCCAAGTACTAATG
CAGAACAACAGAATGGTGATGCTGACACACACACAAACACACTTCTTTAGTCATAGAACA
CACCAACAAACACACACGTACACACGCCAAACGCTACATGAAAAGCGTGACATATGAGTT
ATTTATTTTGTTCAAGTTCAGTCATTTTTGTTTATTCACGCTGTTGTGATCAGATTAGAA
CCGAATCGATATTTGTTGGATGCGTTTTTTTTTGTTTTTTTTTTTTTTAATATTTAGTGT
TTGTTTATCTTTTGTGTAAATTACTTTATAAAGTTTCACATAAATCAAATTTATGAATAA
AATTAAAAAAAAAACAGGCATTTATGTATTTGCGCAGCACAAAAGAACAACACATACACA
AAAACACACATATTCAACAAAGAGATGAAAACGAAAAGAAAAATAAAACGATTTTACAAA
CACAATAACGGGCAAAGGAGAGATAAAACAGCTCAACAGAAAGCAGAAAATCTCTACAAG
CCATTCCAAGAACAACAATAACAATGGGCAAAGTGGAGCAAAATTCCCCTCCCCTGTGTT
GGGGACGGGGGGAGGAACAACTCAGTGGCACTGGCACAGACAGAAGATTATCATGAAGCA
TTATTAGTTAACTTATAGCAGCAAAACCGAGGAACTATATTTAGCGCGAGCAAAGTGTGT
GAAGGGGCATACGTATTAAGAAGGTAACAAAACAACAAAAAAAAAACAATACAAATCAGC
ACAGAAAAAATAATAAGATGCATGAATAGGGAAGAATATCCAAGCTGTTTCAGTCAGAAA
TGCGAACGTCAGTGTTGGTAGGAAGTTAAACAGTGGAGAAAAAAAAACATTCACCAGATG
CTGAGATGGCAAAACAAAAAGTGGAAGTGAAAAAGTGAAAGTGAAAAACAGGAGGATGAT
TTAATAATAAT

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)