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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1135 fasta sequence
[CCGAATTGATGTCGCGGGTCGGACGCAGTTTTGTTTACCTTTTTTCCCCCCCACGGGTACCGCGAGGCTTTGCGACACACAAAATTTGCTTGGTCCGCGAAAACGGCTCCCCTCGCTGCCCCTCCGCAGAAGGAATTGACAGTAATTCCGCTTTCCCGTTCCTTTGTGTGCACGCAGTAAGGTACCCGGCACGGAGTAAGAAACAATAATGGTGCTGCCAACACCGTACAAGCCATCTTTGCCGCCCGCTTCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGTGTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGACGGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGTGGCGAGCAGACGTTTCACCAGCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTTAACAGGCTGCGCACGGAAGATCTTT-----CCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACC-GGTCCGTGTGGACGTTGGCTTTTCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTACGTGGAAAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTTTCATCCGACTGAAAACTATCTGCTGCTCACCAGCATGAACGAGGTGATCTTTTGGGACTGGAAGAACGACAAAACGTACACGACGGGAATGTACAGCGATTGCAAGTGTCGCTTCCTGCACGTGACGCAGGATCTGCGGCTGATTACTGGCATTTCGCAAACGCAAACGCACGTGATGGCGGGCATCGGCAAGAACGTGGAGGAGGTTGAGCCGGAGTATCTGATGGTGTCGTTCCTGCGCAGCCTTAGCTTGATGTTGGACAAGCTCGAGCTGACGCTGTCGACGCAGGTCGACCATCTGCTGCAGCTGGGAATGAGCAAGCAGTGCCTTATCTGGATACATCTGCTGCAAACCATCAA]
[+] EMBL BM651416 [CCGAATTGATGTCGCGGGTCGGACGCAGTTTTGTTTACCTTTTTTCCCCCCCACGGGTACCGCGAGGCTTTGCGACACACAAAATTTGCTTGGTCCGCGAAAACGGCTCCCCTCGCTGCCCCTCCGCAGAAGGAATTGACAGTAATTCCGCTTTCCCGTTCCTTTGTGTGCACGCAGTAAGGTACCCGGCACGGAGTAAGAAACAATAATGGTGCTGCCAACACCGTACAAGCCATCTTTGCCGCCCGCTTCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGTGTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGACGGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGTGGCGAGCAGACGTTTCACCAGCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTTAACAGGCTGCGCACGGAAGATCTTT CCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACCGGGTCCGTGTGGACGCTGGCTTTTCACCCAA ]
[+] EMBL BM636320 [ ccgCGTTTCACCAGCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTGAACAGGCTGCGCACGGAAGATCTTTGTAAGCCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACC GGTCCGTGTGGACGTTGGCTTTTCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTACGTGGAAAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTTTCATCCGACTGAAAACTATCTGCTGCTCACCAGCATGAACGAGGTGATCTTTTGGGACTGGAAGAACGACAAAACGTACACGACGGGAATGTACAGCGATTGCAAGTGTCGCTTCCTGCACGTGACGCAGGATCTGCGGCTGATTACTGGCATTTCGCAAACGCAAACGCACGTGATGGCGGGCATCGGCAAGAACGTGGAGGAGGTTGAGCCGGAGTATCTGATGGTGTCGTTCCTGCGCAGCCTTAGCTTGATGTTGGACAAGCTCG ]
[+] EMBL BX604105 [ GTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACC GGTCCGTGTGGACGTTGGCTTTTCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTACGTGGAAAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTTTCATCCGACTGAAAACTATCTGCTGCTCACCAGCATGAACGAGGTGATCTTTTGGGACTGGAAGAACGACAAAACGTACACGACGGGAATGTACAGCGATTGCAAGTGTCGCTTCCTGCACGTGACGCAGGATCTGCGGCTGATTACTGGCATTTCGCAAACGCAAACGCACGTGATGGCGGGCATCGGCAAGAACGTGGAGGAGGTTGAGCCGGAGTATCTGATGGTGTCGTTCCTGCGCAGCCTTAGCTTGATGTTGGACAAGCTCGAGCTGACGCTGTCGACGCAGGTCGACCATCTGCTGCAGCTGGGAATGAGCAAGCAGTGCCTTATCTGGATACATCTGCTGCAAACCATCAA]
consensusID : consensus_5629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCCATCTTTGCCGCCCGCTCCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGTGTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGACGGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGCGGCGAGCAGACGTTTCACCAGCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTGAACAGGCTGCGCACGGAAGATCTTTGTAAGCCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACCGGTCCGTGTGGACGTTGGCTTTTCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTACGTGGACAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTTTCATCCGACGGAAAACTATCTGCTGCTCACCAGCAT]
[+] EMBL BM587556 [CCGCCCACGCGTCCGCCCACGCGTCCGGCCATCTTTGCCGCCCGCTCCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGTGTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGACGGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGCGGCGAGCAGACGTTTCACCAGCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTGAACAGGCTGCGCACGGAAGATCTTTGTAAGCCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCATAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGCATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACCGGTCCGTGTGGACGTTGGCTTTTCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTACGTGGACAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTTTCATCCGACGGAAAACTATCTGCTGCTCACCAGCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5629#0 CCGAATTGATGTCGCGGGTCGGACGCAGTTTTGTTTACCTTTTTTCCCCCCCACGGGTAC 60
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 CGCGAGGCTTTGCGACACACAAAATTTGCTTGGTCCGCGAAAACGGCTCCCCTCGCTGCC 120
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 CCTCCGCAGAAGGAATTGACAGTAATTCCGCTTTCCCGTTCCTTTGTGTGCACGCAGTAA 180
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 GGTACCCGGCACGGAGTAAGAAACAATAATGGTGCTGCCAACACCGTACAAGCCATCTTT 240
consensus_5629#1 ----------------------CCGCCCACGCGTCCGCCCACGC-GTCCG-GCCATCTTT 36
* * * * *** ** * ** * *********
consensus_5629#0 GCCGCCCGCTTCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGT 300
consensus_5629#1 GCCGCCCGCTCCAGCAAACCTGCCGAACGAAAGGATGCAAAAAATCGATCGTAATATCGT 96
********** *************************************************
consensus_5629#0 GTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGAC 360
consensus_5629#1 GTACCAGCTAGACAACCGTGAGCGGGGCTATCGAACGCGCAAGATTCGACGGAATGCGAC 156
************************************************************
consensus_5629#0 GGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGTGGCGAGCAGACGTTTCACCA 420
consensus_5629#1 GGCAATGTCGGCCACCCCGGCCATCATCAGCGCCGGATGCGGCGAGCAGACGTTTCACCA 216
*************************************** ********************
consensus_5629#0 GCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTTAACAGGCTGCGCACGGAAGATCTTT- 479
consensus_5629#1 GCTTGCGATTGAAGTGGCCGAGCAGGTGGTGCTGAACAGGCTGCGCACGGAAGATCTTTG 276
********************************* *************************
consensus_5629#0 ----CCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCA 535
consensus_5629#1 TAAGCCCATCAACGATTTGGCCAGTGAAACGGAATCCGTTTTCAACATCGAACAAAGCCA 336
********************************************************
consensus_5629#0 TAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGC 595
consensus_5629#1 TAACGGACTGCTCACTGCCACCGTACAGACCAATCGAAGCGTCAATGTGTTTCAAACGGC 396
************************************************************
consensus_5629#0 ATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACCGGTCCGTGTGGACGTTGGCTTT 655
consensus_5629#1 ATCGTTGCAGAAAGTTGTCAAATATCCCACAGGCGACCGGTCCGTGTGGACGTTGGCTTT 456
************************************************************
consensus_5629#0 TCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTA 715
consensus_5629#1 TCATCCAACGAACGACCAAATCATCGCGTTCGGTACGCTTGGCGGTACGGTCCTGGTGTA 516
************************************************************
consensus_5629#0 CGTGGAAAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTT 775
consensus_5629#1 CGTGGACAACCATCTCGTTGGCACGCTGAACGAGCCGGAACCGATCGGATCGCTTTGCTT 576
****** *****************************************************
consensus_5629#0 TCATCCGACTGAAAACTATCTGCTGCTCACCAGCATGAACGAGGTGATCTTTTGGGACTG 835
consensus_5629#1 TCATCCGACGGAAAACTATCTGCTGCTCACCAGCAT------------------------ 612
********* **************************
consensus_5629#0 GAAGAACGACAAAACGTACACGACGGGAATGTACAGCGATTGCAAGTGTCGCTTCCTGCA 895
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 CGTGACGCAGGATCTGCGGCTGATTACTGGCATTTCGCAAACGCAAACGCACGTGATGGC 955
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 GGGCATCGGCAAGAACGTGGAGGAGGTTGAGCCGGAGTATCTGATGGTGTCGTTCCTGCG 1015
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 CAGCCTTAGCTTGATGTTGGACAAGCTCGAGCTGACGCTGTCGACGCAGGTCGACCATCT 1075
consensus_5629#1 ------------------------------------------------------------
consensus_5629#0 GCTGCAGCTGGGAATGAGCAAGCAGTGCCTTATCTGGATACATCTGCTGCAAACCATCAA 1135
consensus_5629#1 ------------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||