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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1544 fasta sequence
[CCGCGGACGCGTGGGCGTGTGGTCGAGAGCCCCCACGCATTGATGCGTTGTGAATATCTCTTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGTGCGTTTACATTTGTGGAAATGACCCATCAATAGGGTATATTCTAAAAGTGCATGTATACGAGAGCGTGTGAGGGCGCGTTTGTGTGTGTGTGTGTGCAAGAAACAATTTTTTGAAATCCAGCTAGTTTTCAATTTTTCTTTTTCTTGTTACAGCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTGTACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGAAAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACAAAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAACCATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGG-ATTATCATCAATCGAAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCCGCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGCAAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATTCTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATCCGCTGATGTTCGACATGGACCAGGGTTTCTCGCAGAATTTTACGCAGGACCAGGTCGATGATATGAATCAGCAACTGAGTCAGACGCGCTCACAGCGCGTCCGAGCTGCGATGTTCCCGGAGACACTCGAGGAAGGCATCGAGATTCCGTCGACACAGTTCGACCCGCAGCAGCCCACCGCGGTGCAGCGGCTGGCCGAACCGTCCCAGATGCTGAAGCACGCGGTCGTCAACCTGATTAACTATCAGGACGATGCGGATCTGGCGACCAGAGCCATCCCCGAACTGATCAAGCTGCTGAACGACGAGGACCAGGTGGTGGTTTCGCAGGCCGCCATGATGGTGCACCAACTGTCCAAAAAGGAAGCGTCCCGGCATGCGATAATGAACAGTCCGCAGATGGTGGCCGCTCTCGTCCGTGCGCTCTCCAACTCGAACGATCTCGAGACAACCAAAGGTGCGGTCGGCACACTGCACAACTTGTCGCACCATCGCCAGGGTCTGCTCGCGATCTTCAAGTCGGGTGGAATACCGGCACTGGTAAAGCTGTTGTCTTCGCCGGTCGAGTCGGTGTTGTTCTACGCAATCACCACGCTGCACAACCTGCTGCTGCACCAGGATGGCAGCAAGATGGCGGTCCGTCTGGCTGGCGGACTGCAGAAGATGGTTGCCCTGCTCCAGCGCAACAACGTCAAGTTTCTTGCCATCGTCACGGACTGTCTACAGATTCTGGCATACGGCAACCAAGAGAGCAAGCTGATCATACTCGCG]
[+] EMBL BM606288 [CCGCGGACGCGTGGGCGTGTGGTCGAGAGCCCCCACGCATTGATGCGTTGTGAATATCTCTTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGTGCGTTTACATTTGTGGAAATGACCCATCAATAGGGTATATTCTAAAAGTGCATGTATACGAGAGCGTGTGAGGGCGCGTTTGTGTGTGTGTGTGTGCAAGAAACAATTTTTTGAAATCCAGCTAGTTTTCAATTTTTCTTTTTCTTGTTACAGCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTGTACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGAAAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACAAAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAACCATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGGAATTATCATCAATCGAAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCCGCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGCAAAGGAGCAAA ]
[+] EMBL BM654879 [ ccgCAAAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAACCATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGG ATTATCATCAATCGAAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCCGCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGCAAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATTCTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATCCGCTGATGTTCGACATGGACCAGGGTTTCTCGCAGAATTTTACGCAGGACCAGGTCGATGATATGAATCAGCAACTGAGTCAGACGCGCTCACAGCGCGTCCGAGCTGCGATGTTCCCGGAGACACTCGAGGAAGGCATCGAGATTCCGTCGACACAGTTCGACCCGCAGCAGCCCACCG ]
[+] EMBL BM648024 [ ccgGAATCAGCAACTGAGTCAGACGCGCTCACAGCGCGTCCGAGCTGCGATGTTCCCGGAGACACTCGAGGAAGGCATCGAGATTCCGTCGACACAGTTCGACCCGCAGCAGCCCACCGCGGTGCAGCGGCTGGCCGAACCGTCCCAGATGCTGAAGCACGCGGTCGTCAACCTGATTAACTATCAGGACGATGCGGATCTGGCGACCAGAGCCATCCCCGAACTGATCAAGCTGCTGAACGACGAGGACCAGGTGGTGGTTTCGCAGGCCGCCATGATGGTGCACCAACTGTCCAAAAAGGAAGCGTCCCGGCATGCGATAATGAACAGTCCGCAGATGGTGGCCGCTCTCGTCCGTGCGCTCTCCAACTCGAACGATCTCGAGACAACCAAAGGTGCGGTCGGCACACTGCACAACTTGTCGCACCATCGCCAGGGTCTGCTCGCGATCTTCAAGTCGGGTGGAATACCGGCACTGGTAAAGCTGTTGTCTTCGCCGGTCGAGTCGGTGTTGTTCTACGCAATCACCACGCTGCACAACCTGCTGCTGCACCAGGATGGCAGCAAGATGGCGGTCCGTCTGGCTGGCGGACTGCAGAAGATGGTTGCCCTGCTCCAGCGCAACAACGTCAAGTTTCTTGCCATCGTCACGGACTGTCTACAGATTCTGGCATACGGCAACCAAGAGAGCAAGCTGATCATACTCGCG]
consensusID : consensus_5653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCTTACGTGTGGTCGAGAGCCCCCACGCATTGATGCGTTGTGAATATCTCTTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGTGCGTTTACATTTGTGCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTGTACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGAAAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACAAAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAACCATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGGATTATCATCAATCGAAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCCGCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGCAAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATTTCTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATCCGCTGATGATCGACATGGACCAGGGGT]
[+] EMBL BM589668 [CCGCTTACGTGTGGTCGAGAGCCCCCACGCATTGATGCGTTGTGAATATCTCTTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGTGCGTTTACATTTGTGCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTGTACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGAAAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACAAAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAACCATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGGATTATCATCAATCGAAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCCGCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGCAAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATTTCTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATCCGCTGATGATCGACATGGACCAGGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5653#0 CCGCGGACGCGTGGGCGTGTGGTCGAGAGCCCCCACGCATTGATGCGTTGTGAATATCTC 60
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 TTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGTGCGTTTACATTTGTGGAAATGAC 120
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 CCATCAATAGGGTATATTCTAAAAGTGCATGTATACGAGAGCGTGTGAGGGCGCGTTTGT 180
consensus_5653#1 ----------------------------CCGCTTACGTG--TGGTCGAGAGCCCCCACGC 30
* **** * * *** ** * *
consensus_5653#0 GTGTGTGTGTGTGCAAGAAACAATTTTTTGAAATCCAGCTAGTTTTCAATTTTTCTTTTT 240
consensus_5653#1 ATTGATGCGT-TGTGAATATCTCTTGTCTCAACAACACTCCGTTTTCTGTCCGTGTGCGT 89
* ** ** ** * * * ** * * ** ** ****** * * * *
consensus_5653#0 CTTGTTACA-----GCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTG 295
consensus_5653#1 GCGTTTACATTTGTGCTGTAAGAAGGAGAAGAACAAAAAAAATCAACGAGTGTATGTGTG 149
***** **********************************************
consensus_5653#0 TACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGA 355
consensus_5653#1 TACACGTAGCGTGTTTGTATGCGCGCGGAATCAATCAATAGACATTTTGTTTAGTGTGGA 209
************************************************************
consensus_5653#0 AAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACA 415
consensus_5653#1 AAGTAGAGCTTCTCTTGCGTGTGTGTGTGTGTAGTGGCCGTGTTTTCGAGTTTTGGGACA 269
************************************************************
consensus_5653#0 AAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAAC 475
consensus_5653#1 AAAAACACCACCACCGCCGAACCCTCTGACACAACCGAAAAGGGTGTAAAGTGCATCAAC 329
************************************************************
consensus_5653#0 CATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGGATTATCATCAATCG 535
consensus_5653#1 CATCAAGCAGGTTCTTCCACGCACAGTCAATCAACCTTTTCCCGGGATTATCATCAATCG 389
************************************************************
consensus_5653#0 AAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCC 595
consensus_5653#1 AAAAACGGCTTGGCAGTCGATCGCGCCCGCCTGTTGAAGCAGCATGAGTTATCAGATGCC 449
************************************************************
consensus_5653#0 GCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGC 655
consensus_5653#1 GCAAAACAGATCAATGTCTCATAACCCGTACAATTCGTCGGACATGCCGATGCCCTCAGC 509
************************************************************
consensus_5653#0 AAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATT- 714
consensus_5653#1 AAAGGAGCAAACACTGATGTGGCAGCAAAACTCGTACCTCGGCGACTCCGGCATCCATTT 569
***********************************************************
consensus_5653#0 CTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATC 774
consensus_5653#1 CTGGTGCCGTTACCCAGGTGCCGTCGCTTAGCGGTAAGGATGACGACATGGAGGACGATC 629
************************************************************
consensus_5653#0 CGCTGATGTTCGACATGGACCAGGGTTTCTCGCAGAATTTTACGCAGGACCAGGTCGATG 834
consensus_5653#1 CGCTGATGATCGACATGGACCAGGGGT--------------------------------- 656
******** **************** *
consensus_5653#0 ATATGAATCAGCAACTGAGTCAGACGCGCTCACAGCGCGTCCGAGCTGCGATGTTCCCGG 894
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 AGACACTCGAGGAAGGCATCGAGATTCCGTCGACACAGTTCGACCCGCAGCAGCCCACCG 954
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 CGGTGCAGCGGCTGGCCGAACCGTCCCAGATGCTGAAGCACGCGGTCGTCAACCTGATTA 1014
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 ACTATCAGGACGATGCGGATCTGGCGACCAGAGCCATCCCCGAACTGATCAAGCTGCTGA 1074
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 ACGACGAGGACCAGGTGGTGGTTTCGCAGGCCGCCATGATGGTGCACCAACTGTCCAAAA 1134
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 AGGAAGCGTCCCGGCATGCGATAATGAACAGTCCGCAGATGGTGGCCGCTCTCGTCCGTG 1194
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 CGCTCTCCAACTCGAACGATCTCGAGACAACCAAAGGTGCGGTCGGCACACTGCACAACT 1254
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 TGTCGCACCATCGCCAGGGTCTGCTCGCGATCTTCAAGTCGGGTGGAATACCGGCACTGG 1314
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 TAAAGCTGTTGTCTTCGCCGGTCGAGTCGGTGTTGTTCTACGCAATCACCACGCTGCACA 1374
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 ACCTGCTGCTGCACCAGGATGGCAGCAAGATGGCGGTCCGTCTGGCTGGCGGACTGCAGA 1434
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 AGATGGTTGCCCTGCTCCAGCGCAACAACGTCAAGTTTCTTGCCATCGTCACGGACTGTC 1494
consensus_5653#1 ------------------------------------------------------------
consensus_5653#0 TACAGATTCTGGCATACGGCAACCAAGAGAGCAAGCTGATCATACTCGCG 1544
consensus_5653#1 --------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||