cluster # 5656

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Anopheles gambiae
cluster # 5656 cluster # 5656 Sequences # 4 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5656#0 length = 663 sequences # 1
consensus_5656#1 length = 654 sequences # 1

consensus_5656#2 length = 445 sequences # 1
consensus_5656#3 length = 323 sequences # 1

consensusID : consensus_5656#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence

                              [CCGCCCACGCGTCCGACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAGGATGCGTCGCATCGGTTCATGGCGCCGGACAATCGGACGGAGGCACAGAAGGTGCAGGACCTGCTGGGCCAGTTCGTGGAGGAAACCAAGCTAATCAGCGTGATGGACGACAAGCGTACCGAGCAGGATGAGGAGATAGCGAAGCGATTGCAAGCATTGAAGCAATTTCCAACAGCAGGTGATGGAACAGCAGCGACTGCGAGTGGCAACTCCAAGGCAACGATACTCCCGGACAGTGACTCGGACGAAGGCCTGACGGATGAGGAGTTGGCACGAAAGTTAGCCCAGCGGTACGCCGAGGAGGGTAAGCTGGAGGCGAAACTGAACCTGGAAAGTGAGCTGGAGGAGATTACACCAACACCGTCTTCGAACGTTGAGGAAGAGCTGCCTTGGTGTACGATCTGCAACGAGGATGCTGTTCTACGGTGTCGAGGATGTGATAACGATCTGTACTGCAGGGCGTGCTACAAAGAGTTCCACTACGACGAAGATCCGCAGGAGCATCCGACGGTACAGTTCAAGGGCGGAAAAGGGCCAACACGTGTTTAACACGTTTTTGTACG]

[+] EMBL BM607510             [CCGCCCACGCGTCCGACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAGGATGCGTCGCATCGGTTCATGGCGCCGGACAATCGGACGGAGGCACAGAAGGTGCAGGACCTGCTGGGCCAGTTCGTGGAGGAAACCAAGCTAATCAGCGTGATGGACGACAAGCGTACCGAGCAGGATGAGGAGATAGCGAAGCGATTGCAAGCATTGAAGCAATTTCCAACAGCAGGTGATGGAACAGCAGCGACTGCGAGTGGCAACTCCAAGGCAACGATACTCCCGGACAGTGACTCGGACGAAGGCCTGACGGATGAGGAGTTGGCACGAAAGTTAGCCCAGCGGTACGCCGAGGAGGGTAAGCTGGAGGCGAAACTGAACCTGGAAAGTGAGCTGGAGGAGATTACACCAACACCGTCTTCGAACGTTGAGGAAGAGCTGCCTTGGTGTACGATCTGCAACGAGGATGCTGTTCTACGGTGTCGAGGATGTGATAACGATCTGTACTGCAGGGCGTGCTACAAAGAGTTCCACTACGACGAAGATCCGCAGGAGCATCCGACGGTACAGTTCAAGGGCGGAAAAGGGCCAACACGTGTTTAACACGTTTTTGTACG]




>consensus_5656#0
CCGCCCACGCGTCCGACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCG
TTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAGGATGCGTCGCATCGGTTCAT
GGCGCCGGACAATCGGACGGAGGCACAGAAGGTGCAGGACCTGCTGGGCCAGTTCGTGGA
GGAAACCAAGCTAATCAGCGTGATGGACGACAAGCGTACCGAGCAGGATGAGGAGATAGC
GAAGCGATTGCAAGCATTGAAGCAATTTCCAACAGCAGGTGATGGAACAGCAGCGACTGC
GAGTGGCAACTCCAAGGCAACGATACTCCCGGACAGTGACTCGGACGAAGGCCTGACGGA
TGAGGAGTTGGCACGAAAGTTAGCCCAGCGGTACGCCGAGGAGGGTAAGCTGGAGGCGAA
ACTGAACCTGGAAAGTGAGCTGGAGGAGATTACACCAACACCGTCTTCGAACGTTGAGGA
AGAGCTGCCTTGGTGTACGATCTGCAACGAGGATGCTGTTCTACGGTGTCGAGGATGTGA
TAACGATCTGTACTGCAGGGCGTGCTACAAAGAGTTCCACTACGACGAAGATCCGCAGGA
GCATCCGACGGTACAGTTCAAGGGCGGAAAAGGGCCAACACGTGTTTAACACGTTTTTGT
ACG

consensusID : consensus_5656#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 654
fasta sequence

                              [CCGCCCACGCGTCCGGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCCATGAATTAAAACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTGAGTCATCGTGCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAGAAGCTGAATGTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGAACCATCCAACGCCCAACGAAGACGCAGTACCGACGCAGAGCTCGAAAGAGCCGCCAAAGGAACCGGATGGAGATGAGCTAATACGTAGCAAGCTGCAGGCACTGAAGGCAATCGATTTGGGCGAGGAAGACGCACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAG]

[+] EMBL BM599578             [CCGCCCACGCGTCCGGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCCATGAATTAAAACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTGAGTCATCGTGCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAGAAGCTGAATGTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGAACCATCCAACGCCCAACGAAGACGCAGTACCGACGCAGAGCTCGAAAGAGCCGCCAAAGGAACCGGATGGAGATGAGCTAATACGTAGCAAGCTGCAGGCACTGAAGGCAATCGATTTGGGCGAGGAAGACGCACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAG]




>consensus_5656#1
CCGCCCACGCGTCCGGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCCATGAATTAA
AACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGGGAACAATAA
AATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTGAGTCATCGT
GCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGC
ACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAG
TTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAGAAGCTGAAT
GTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAG
GCAACAGTTGCCCCGAACCATCCAACGCCCAACGAAGACGCAGTACCGACGCAGAGCTCG
AAAGAGCCGCCAAAGGAACCGGATGGAGATGAGCTAATACGTAGCAAGCTGCAGGCACTG
AAGGCAATCGATTTGGGCGAGGAAGACGCACCGAAGGAAGGAGAACCGAGCGATAATACA
GATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAG

consensusID : consensus_5656#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence

                              [CCGAACAAAACAAAGTCTGTCGCTGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCCATGAATTAAAACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTGAGTCATCGTGCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAGAAGCTGAATGTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGA]

[+] EMBL BM589983             [CCGAACAAAACAAAGTCTGTCGCTGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCCATGAATTAAAACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTGAGTCATCGTGCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAGAAGCTGAATGTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGA]




>consensus_5656#2
CCGAACAAAACAAAGTCTGTCGCTGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCC
ATGAATTAAAACAGTTATTTTTTAACGTGCGCCAGTGAAAAAGATTGAAAACTGTAAAGG
GAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTG
AGTCATCGTGCTCCGTCGGTCGGGGTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGA
ATGGCCTGCACTATCTGTACCAAATCGTTTGGATTTTTCAACAAAGAGCACGGCTGTCCG
GTGTGCAAGTTTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGATGGCAAG
AAGCTGAATGTTTGTTTGCGCTGTTCAGCGCTTGCGACTGTGAGTGTAAAGGAGGCTCCG
AAAAGGGAGGCAACAGTTGCCCCGA

consensusID : consensus_5656#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 323
fasta sequence

                              [AGGCAGAATCCCGCACGAGTGTAAAACTGTAAAGGGAACAATAANATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTTGAGTCATCGTGCTCCGTCGGTCGGGGCTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGAGTATTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTCTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGACTGGCAAGGAAGCTGAAGTGTTTGTTTGCGCGTGTTCACGCGCCTTGCGA]

[+] EMBL BX466186             [AGGCAGAATCCCGCACGAGTGTAAAACTGTAAAGGGAACAATAANATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTTGAGTCATCGTGCTCCGTCGGTCGGGGCTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAAATCGTTTGGAGTATTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTCTTCGTTCTGCTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGACTGGCAAGGAAGCTGAAGTGTTTGTTTGCGCGTGTTCACGCGCCTTGCGA]




>consensus_5656#3
AGGCAGAATCCCGCACGAGTGTAAAACTGTAAAGGGAACAATAANATTGCAAAATATTGT
AGAAAAAAGGAAAAGGCGGAAGAAAATCCCCGGTTGAGTCATCGTGCTCCGTCGGTCGGG
GCTGTGACTCAGCGCTCCCCGCGGTACTGCAACAGGAATGGCCTGCACTATCTGTACCAA
ATCGTTTGGAGTATTTTCAACAAAGAGCACGGCTGTCCGGTGTGCAAGTTCTTCGTTCTG
CTCGGGCTGCCTCAAGTACAAGCTGGTGCGTGACTGGCAAGGAAGCTGAAGTGTTTGTTT
GCGCGTGTTCACGCGCCTTGCGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5656#1      ---------CCGCCCACGCGTCCGGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCC 51
consensus_5656#2      CCGAACAAAACAAAGTCTGTCGCTGCTGATCGGCTGCGGAAGGCCGTTTTTTTCTTTTCC 60
consensus_5656#3      ------------------------------------------------------------
consensus_5656#0      -------------CCGCCCACGCGTCCGACCGAAGGAAGGAGAACCGAGCGATAATACAG 47
                                                                                  

consensus_5656#1      ATGAATTAAAACAGTTATT--TTTTAACGTGCGCCAGTGAAAAAGATTG-AAAACTGTAA 108
consensus_5656#2      ATGAATTAAAACAGTTATT--TTTTAACGTGCGCCAGTGAAAAAGATTG-AAAACTGTAA 117
consensus_5656#3      ----------------------------AGGCAGAATCCCGCACGAGTGTAAAACTGTAA 32
consensus_5656#0      ATATAGAAAAGCGTTTGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAGGATGCGT 107
                                                    *           * ** *  **   **   

consensus_5656#1      AGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCG 168
consensus_5656#2      AGGGAACAATAAAATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCG 177
consensus_5656#3      AGGGAACAATAANATTGCAAAATATTGTAGAAAAAAGGAAAAGGCGGAAGAAAATCCCCG 92
consensus_5656#0      CGCATCGGTTCATGGCGCCGGACAATCGGACGGAGGCACAGAAGGTGCAGGACCTGCTGG 167
                       *       * *    **   * * *       *     * * *  * ** *  * *  *

consensus_5656#1      GT-GAGTCATCGTG----CTCCGTCGGTCGGGG-TGTGACTCA---GCGCTCCCCGCGGT 219
consensus_5656#2      GT-GAGTCATCGTG----CTCCGTCGGTCGGGG-TGTGACTCA---GCGCTCCCCGCGGT 228
consensus_5656#3      GTTGAGTCATCGTG----CTCCGTCGGTCGGGGCTGTGACTCA---GCGCTCCCCGCGGT 145
consensus_5656#0      GCCAGTTCGTGGAGGAAACCAAGCTAATCAGCGTGATGGACGACAAGCGTACCGAGCAGG 227
                      *     ** * * *    *   *    ** * *   **    *   ***  **  ** * 

consensus_5656#1      ACT--GCAACAG-GAATGGCCTGCACTATCTGTACCAAAT--CGTTTGGATT--TTTCAA 272
consensus_5656#2      ACT--GCAACAG-GAATGGCCTGCACTATCTGTACCAAAT--CGTTTGGATT--TTTCAA 281
consensus_5656#3      ACT--GCAACAG-GAATGGCCTGCACTATCTGTACCAAAT--CGTTTGGAGTATTTTCAA 200
consensus_5656#0      ATGAGGAGATAGCGAAGCGATTGCAAGCATTGAAGCAATTTCCAACAGCAGGTGATGGAA 287
                      *    *  * ** ***  *  ****     ** * *** *  *    * *     *  **

consensus_5656#1      CAAAGAGCACGGCTGTCCGGTGTGCAAGTT-TTCGTTCTGCTCGGGC--TGCCTCAAGTA 329
consensus_5656#2      CAAAGAGCACGGCTGTCCGGTGTGCAAGTT-TTCGTTCTGCTCGGGC--TGCCTCAAGTA 338
consensus_5656#3      CAAAGAGCACGGCTGTCCGGTGTGCAAGTTCTTCGTTCTGCTCGGGC--TGCCTCAAGTA 258
consensus_5656#0      CAGCAGCGACTGCGAGTGGCAACTCCAAGGCAACGATACTCCCGGACAGTGACTCGGACG 347
                      **      ** **     *     * *      ** *   * *** *  ** ***     

consensus_5656#1      CAAGC-TGGTGCGTGA-----TGGCAAG-AAGCTGAA-TGTTTGTTTGC--GC-TGTTCA 378
consensus_5656#2      CAAGC-TGGTGCGTGA-----TGGCAAG-AAGCTGAA-TGTTTGTTTGC--GC-TGTTCA 387
consensus_5656#3      CAAGC-TGGTGCGTGAC----TGGCAAGGAAGCTGAAGTGTTTGTTTGC--GCGTGTTCA 311
consensus_5656#0      AAGGCCTGACGGATGAGGAGTTGGCACGAAAGTTAGCCCAGCGGTACGCCGAGGAGGGTA 407
                       * ** **  *  ***     ***** * *** *         **  **      *   *

consensus_5656#1      -GCGC-TTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGA 436
consensus_5656#2      -GCGC-TTGCGACTGTGAGTGTAAAGGAGGCTCCGAAAAGGGAGGCAACAGTTGCCCCGA 445
consensus_5656#3      CGCGCCTTGCGA------------------------------------------------ 323
consensus_5656#0      AGCTGGAGGCGAAACTGAACCTGGAAAGTGAGCTGGA---GGAGATTACACCAACACCG- 463
                       **     ****                                                

consensus_5656#1      ACCATCCAACGCCCAACGAAGACGCAGTACCGACGCAGAGCTCGAAAGAGCCGCCAAAGG 496
consensus_5656#2      ------------------------------------------------------------
consensus_5656#3      ------------------------------------------------------------
consensus_5656#0      -TCTTCGAACGTTGAGGAAGAGCTGCCTTGGTGTACGATCTGCAACGAGGATGCTGTTCT 522
                                                                                  

consensus_5656#1      AACCGGATGGAGATGAGCTAATACGTAGCAAGCTGCAGGCACTGAAGGCAATCGATTTGG 556
consensus_5656#2      ------------------------------------------------------------
consensus_5656#3      ------------------------------------------------------------
consensus_5656#0      ACGGTGTCGAGGATGTGATAACGATCTGTA--CTGCAGGGCGTGCTACAAA--GAGTTCC 578
                                                                                  

consensus_5656#1      GCGAGGAAGACGCACCGAAGGAAGGAGAACCGAGCGATAATACAGATATAGAAAAGCGTT 616
consensus_5656#2      ------------------------------------------------------------
consensus_5656#3      ------------------------------------------------------------
consensus_5656#0      ACTACGACGAAGATCCGCAGGAGCATCCGACGGT--ACAGTTCAAGGGCGGAAAAGGGCC 636
                                                                                  

consensus_5656#1      TGGCAGCGTTAAAGGGAGTTGAGTATAAGGATTACAAG 654
consensus_5656#2      --------------------------------------
consensus_5656#3      --------------------------------------
consensus_5656#0      AACACGTGTTTAACACGTTTTTGTACG----------- 663