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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5670#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1106 fasta sequence
[CCGCATCAACACACAGCCTGGAAAATGGACTACGAGAACGAAAAAGTGATAAAATTTATCTTTCCCGATGATTACGAAGAACTGTCCGTCCAAGACACGACCGACGTGGTCGATTATTTGCTCAAGCTCGGCACCTACAAGGCGGAAGACTTGAAAAAGGAAAAGGTACGCCTGCAGGACGAACATCGGCAGAATGTGGAGCAGACGCAGGATCTGGCCATCTCGCACTATCCCACGTTCATCCGGACAGCGGAAAGTTCGCGCGAAATCTATCGCGAGTTTGTCGCGACGGAAAGGAAGCTCGATTGTTTGAGCGACAAGTGGCCCAAGTTTATTGCCGCGTGTCAAACGTTCCAGCAGGGCTCGGCGGACATTAATGCGGCTCGGCGGCTGAATTCGCTCACGCTGCTGCGCAATGCGGAGCTGCTGGAGGTGCTCGAAATACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAACATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATGCAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGCTATCTGCGCCGAATGCAAGCATTTACTGGCAGCGAGCTGAAGCTAAAGTTCCTCCAAACGCGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCATCTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGTGCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGCCGGCGCAACCATGGGCAACGAGCGAATGGCGGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATGGACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACCATACTCGGACAGTGCATGTACTTCGGGCTATCGTTCAGCCGCGTTGGGATCGATTTCCGTGCGCTCGTGGCGCCTGTGTTTTGTGC]
[+] EMBL BM614218 [CCGCATCAACACACAGCCTGGAAAATGGACTACGAGAACGAAAAAGTGATAAAATTTATCTTTCCCGATGATTACGAAGAACTGTCCGTCCAAGACACGACCGACGTGGTCGATTATTTGCTCAAGCTCGGCACCTACAAGGCGGAAGACTTGAAAAAGGAAAAGGTACGCCTGCAGGACGAACATCGGCAGAATGTGGAGCAGACGCAGGATCTGGCCATCTCGCACTATCCCACGTTCATCCGGACAGCGGAAAGTTCGCGCGAAATCTATCGCGAGTTTGTCGCGACGGAAAGGAAGCTCGATTGTTTGAGCGACAAGTGGCCCAAGTTTATTGCCGCGTGTCAAACGTTCCAGCAGGGCTCGGCGGACATTAATGCGGCTCGGCGGCTGAATTCGCTCACGCTGCTGCGCAATGCGGAGCTGCTGGAGGTGCTCGAAATACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAACATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATGCAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGCTATCTGCGC ]
[+] EMBL BM604433 [ ccGTCCGTCCAAGACACGACCGACGTGGTCGATTATTTGCTCAAGCTCGGCACCTACAAGGCGGAAGACTTGAAAAAGGAAAAGGTACGCCTGCAGGACGAACATCGGCAGAATGTGGAGCAGACGCAGGATCTGGCCATCTCGCACTATCCCACGTTCATCCGGACAGCGGAAAGTTCGCGCGAAATCTATCGCGAGTTTGTCGCGACGGAAAGGAAGCTCGATTGTTTGAGCGACAAGTGGCCCAAGTTTATTGCCGCGTGTCAAACGTTCCAGCAGGGCTCGGCGGACATTAATGCGGCTCGGCGGCTGAATTCGCTCACGCTGCTGCGCAATGCGGAGCTGCTGGAGGTGCTCGAAATACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGC ]
[+] EMBL BX605271 [ TGCTGCGCAATGCGGAGCTGCTGGAGGTGCTCGAAATACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTGCAGCGGTTGATGACGAAGCATGGCAACATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATGCAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGCTATCTGCGCCGAATGCAAGCATTTACTGGCAGCGAGCTGAAGCTAAAGTTCCTCCAAACGCGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCATCTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGTGCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGCCGGCGCAACCATGGGCAACGAGCGAATGGCGGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATGGACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACCATACTCGGACAGTGCATGTACTTCGGGCTATCGTTCAGCCGCGTTGGGATCGATTTCCGTGCGCTCGTGGCGCCTGTGTTTTGTGC]
consensusID : consensus_5670#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence
[CCGCCCACGCGTCCGACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAACATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATGCAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGCTATCTGCGCCGAATGCAAGCATTTACCGGCAGCGAGCTGAAGCTAAAGTTTCTGCAAACGCGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCATCTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGTGCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGTCGGCCCAACGATGGGAAACGAGCGAATGGCAGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATGGACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACCATACTCGGACAGTGCATGTACTT]
[+] EMBL BM591889 [CCGCCCACGCGTCCGACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAGTACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAACATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATGCAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGCTATCTGCGCCGAATGCAAGCATTTACCGGCAGCGAGCTGAAGCTAAAGTTTCTGCAAACGCGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCATCTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGTGCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGTCGGCCCAACGATGGGAAACGAGCGAATGGCAGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATGGACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACCATACTCGGACAGTGCATGTACTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5670#0 CCGCATCAACACACAGCCTGGAAAATGGACTACGAGAACGAAAAAGTGATAAAATTTATC 60
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 TTTCCCGATGATTACGAAGAACTGTCCGTCCAAGACACGACCGACGTGGTCGATTATTTG 120
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 CTCAAGCTCGGCACCTACAAGGCGGAAGACTTGAAAAAGGAAAAGGTACGCCTGCAGGAC 180
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 GAACATCGGCAGAATGTGGAGCAGACGCAGGATCTGGCCATCTCGCACTATCCCACGTTC 240
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 ATCCGGACAGCGGAAAGTTCGCGCGAAATCTATCGCGAGTTTGTCGCGACGGAAAGGAAG 300
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 CTCGATTGTTTGAGCGACAAGTGGCCCAAGTTTATTGCCGCGTGTCAAACGTTCCAGCAG 360
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 GGCTCGGCGGACATTAATGCGGCTCGGCGGCTGAATTCGCTCACGCTGCTGCGCAATGCG 420
consensus_5670#1 ------------------------------------------------------------
consensus_5670#0 GAGCTGCTGGAGGTGCTCGAAATACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAG 480
consensus_5670#1 ---CCGCCC-ACGCGTCCG----ACCGCAGCTAATGGACAGCTGCATACGGGAGGGCAAG 52
* ** * * * ** *************************************
consensus_5670#0 TACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAAC 540
consensus_5670#1 TACGAGGAGGCGCTGGAGCTGTCGTCGTACGTTCAGCGGTTGATGACGAAGCATGGCAAC 112
************************************************************
consensus_5670#0 ATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATG 600
consensus_5670#1 ATTCCGGTAATAGCGAGTATTAACGAAGCGGTGGAAGCGGCCTGGCACACCATGCTAATG 172
************************************************************
consensus_5670#0 CAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGC 660
consensus_5670#1 CAGCTGCTGACCCAGTTGCGCACCGATCTGCAACTCCCCAAGTGCCTCCAGGTCGTGGGC 232
************************************************************
consensus_5670#0 TATCTGCGCCGAATGCAAGCATTTACTGGCAGCGAGCTGAAGCTAAAGTTCCTCCAAACG 720
consensus_5670#1 TATCTGCGCCGAATGCAAGCATTTACCGGCAGCGAGCTGAAGCTAAAGTTTCTGCAAACG 292
************************** *********************** ** ******
consensus_5670#0 CGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCAT 780
consensus_5670#1 CGCACCAGCTGGCTGAAGGATGTGCTTGCCACCATCCCGTCGGACGATGCGCAGCTCCAT 352
************************************************************
consensus_5670#0 CTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGT 840
consensus_5670#1 CTGACGAAAACGATCGAAGCGACGCGGGTGCATCTGTTCAACATCATCACCCAGTACCGT 412
************************************************************
consensus_5670#0 GCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGCCGGCGCAACCATGGGCAACGAG 900
consensus_5670#1 GCCCTGTTCCCGGACGACGAGGACACGTTCAGCCCGGTCGGCCCAACGATGGGAAACGAG 472
************************************* **** **** ***** ******
consensus_5670#0 CGAATGGCGGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATG 960
consensus_5670#1 CGAATGGCAGCGGGTGACGAGGGTAAGATTTTCCACAGCTGGCTGCACGACCAGATCATG 532
******** ***************************************************
consensus_5670#0 GACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACC 1020
consensus_5670#1 GACTTTGTGCGTACGCTCGAGCGAGATCTCGCCTCCAACGATCTCGTCTCGTACGACACC 592
************************************************************
consensus_5670#0 ATACTCGGACAGTGCATGTACTTCGGGCTATCGTTCAGCCGCGTTGGGATCGATTTCCGT 1080
consensus_5670#1 ATACTCGGACAGTGCATGTACTT------------------------------------- 615
***********************
consensus_5670#0 GCGCTCGTGGCGCCTGTGTTTTGTGC 1106
consensus_5670#1 --------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||