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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 908 fasta sequence
[CCGGTGCATTCTGGTGGTGTGTGAGTGTGCCTTGGCAATTTCGGAGAGCGGACGGAAAATTCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTTCCGGGTGCTTTTCACACTTACCTCCCTTCCCTCGCACAGGAAGCAGTGTCCTTGCCTTGCCGCGCGCGCTCTCGTGTTCGTGTGTGCGTGTGTGTGTGTGTGTGTACAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCCAATCGTGCCGTCGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCGAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAAGCGCTGGGCGTTGCCGGTGGCGGA-AAAACGAGCAGCAGCAGCAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAGACCGGCTTTACGGTGCAGGTGCTGTCGCCGGGCGTGGAGCCGCTCTCGATACAGGTGTCGAGCATGGAGCTGGTGCAGGAGATCCACCAGCTGCTGATGGACCGGGAGGACACGTGCCACCGGACGTGCTTCTCGCTGCAGCTCGACGGCCGCACGCTGG]
[+] EMBL BM599425 [CCGGTGCATTCTGGTGGTGTGTGAGTGTGCCTTGGCAATTTCGGAGAGCGGACGGAAAATTCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTTCCGGGTGCTTTTCACACTTACCTCCCTTCCCTCGCACAGGAAGCAGTGTCCTTGCCTTGCCGCGCGCGCTCTCGTGTTCGTGTGTGCGTGTGTGTGTGTGTGTGTACAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCCAATCGTGCCGTCGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCGAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAAGCGCTGGGCGTTGCCGGTGGCGGA AAAACGAGC ]
[+] EMBL BM598881 [ CCG CGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCGAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAAGCGCT GGCGTTGCCGGTGGCGGAGAGACCGAGCAGCAGCAGCAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAGACCGGCTTTACGGTGCAGGTGCTGTCGCCGGGCGTGGAGCCGCTCTCGATACAGGTGTCGAGCATGGAGCTGGTGCAGGAGATCCACCAGCTGCTGATGGACCGGGAGGACACGTGCCACCGGACGTGCTTCTCGCTGCAGCTCGACGGCCGCACGCTGG]
consensusID : consensus_5723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 753 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGCGATTTCGGAGAGCGGACGGAAAATTCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTTCCGGGTGCTTTTCACACTTACCTCCCCACCCTCGCACAGGAAGCAGTGTCCTTGCCTTGCCGCGCGCGCTCTCGTGTTCGTGTGTGCGTGCGTGCGTGTGTGTGTATGTGTGTGTGTGTACAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCTAATCGTGCCGTCGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCCAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAAGCGCTGGCGTTGCCGGTGGCGGAGAGACCGAGCAGCAGCAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAG]
[+] EMBL BM656045 [CCGCCCACGCGTCCGCCCACGCGTCCGGGCGATTTCGGAGAGCGGACGGAAAATTCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTTCCGGGTGCTTTTCACACTTACCTCCCCACCCTCGCACAGGAAGCAGTGTCCTTGCCTTGCCGCGCGCGCTCTCGTGTTCGTGTGTGCGTGCGTGCGTGTGTGTGTATGTGTGTGTGTGTACAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCTAATCGTGCCGTCGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCCAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAA ]
[+] EMBL BM623700 [ CCG AGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTTCCGGGTGCTTTTCACACTTACCTCCCCACCCTCGCACAGGAAGCAGTGTCCTTGCCTTGCCGCGCGCGCTCTCGTGTTCGTGTGTGCGTGCGTGCGTGTGTGTGTATGTGTGTGTGTGTACAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCTAATCGTGCCGTCGCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAACCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGTGTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGCGGCAAAAAGAAAGGTATGGCCAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCGGTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAGAACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAACGAGTCCGCGGACGATAAAAGCGCTGGCGTTGCCGGTGGCGGAGAGACCGAGCAGCAGCAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5723#0 CCGGTGCATTCTGGTGGTGTGTGAGTGTGCCTTGGCAATTTCGGAGAGCGGACGGAAAAT 60
consensus_5723#1 ------CCGCCCACGCGTCCGCCCACGCGTCCGGGCGATTTCGGAGAGCGGACGGAAAAT 54
* * ** * * * * *** ***********************
consensus_5723#0 TCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTT 120
consensus_5723#1 TCAGGCCGAAGAAAACAGCCGGACTGGTGCTTGGCTGGTGCAAATAGGGCGACAGGACTT 114
************************************************************
consensus_5723#0 CCGGGTGCTTTTCACACTTACCTCCCTTCCCTCGCACAGGAAGCAGTGTCCTTGCCTTGC 180
consensus_5723#1 CCGGGTGCTTTTCACACTTACCTCCCCACCCTCGCACAGGAAGCAGTGTCCTTGCCTTGC 174
************************** ********************************
consensus_5723#0 CGCGCGCGCTCTCGTGTTCGTGTGTGCGTGTGTG--------------TGTGTGTGTGTA 226
consensus_5723#1 CGCGCGCGCTCTCGTGTTCGTGTGTGCGTGCGTGCGTGTGTGTGTATGTGTGTGTGTGTA 234
****************************** *** ************
consensus_5723#0 CAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCCAATCGTGCCGTC 286
consensus_5723#1 CAGTGCATGGAAATTACAGAGACCGTGAAGAAGGAAGAAGTTTCGTCTAATCGTGCCGTC 294
*********************************************** ************
consensus_5723#0 GCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAA 346
consensus_5723#1 GCACCGTGTGGAAGCAGCGTGTGACTTTCGACCGAAACGTGCGTGTGTAGAACCAGGAAA 354
************************************************************
consensus_5723#0 CCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGT 406
consensus_5723#1 CCGCCAGTGTTGTCTGCCTAAAGGAGCGGGTTGTGAAATATGGCACTGGAAACGGAAAGT 414
************************************************************
consensus_5723#0 GTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGC 466
consensus_5723#1 GTTCAATCGGCCGGAGCCGCAACGGAGGCGCTGTCCACCGCTGGTTCCGGGGAGGCGGGC 474
************************************************************
consensus_5723#0 GGCAAAAAGAAAGGTATGGCGAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCG 526
consensus_5723#1 GGCAAAAAGAAAGGTATGGCCAAGAACAAAAAACAGAATGGAAAAGCAAAAACTCCCCCG 534
******************** ***************************************
consensus_5723#0 GTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAG 586
consensus_5723#1 GTGGTGGCAGCGGCGGCCGGTGAGCAAAAGGAAACGATCGGCAACGGACACGCGGAACAG 594
************************************************************
consensus_5723#0 AACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAAC 646
consensus_5723#1 AACGGGCTGAACGGACACGCGAGCTCGGAAGAGTCGGACCCGGCCGCTGCTGGCCCGAAC 654
************************************************************
consensus_5723#0 GAGTCCGCGGACGATAAAAGCGCTGGGCGTTGCCGGTGGCGGAAAAACGAGCAGCAGCAG 706
consensus_5723#1 GAGTCCGCGGACGATAAAAGCGCTGG-CGTTGCCGGTGGCGGAGAGACCG--AGCAGCAG 711
************************** **************** * ** ********
consensus_5723#0 CAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAGACCGGCTTTACGGTGCAG 766
consensus_5723#1 CAGCAGCAGCAGGAGGACGACGTGATGAGGCTGATGCAGGAG------------------ 753
******************************************
consensus_5723#0 GTGCTGTCGCCGGGCGTGGAGCCGCTCTCGATACAGGTGTCGAGCATGGAGCTGGTGCAG 826
consensus_5723#1 ------------------------------------------------------------
consensus_5723#0 GAGATCCACCAGCTGCTGATGGACCGGGAGGACACGTGCCACCGGACGTGCTTCTCGCTG 886
consensus_5723#1 ------------------------------------------------------------
consensus_5723#0 CAGCTCGACGGCCGCACGCTGG 908
consensus_5723#1 ----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||