These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5727#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1860 fasta sequence [CCGCGCAACAAGAGCCAGCGCTACGATGGCCGCACAATCGATACCCACTCGAGCCCGGTCCGGCGGCTGGATGCGACGACGGCGGGCATCATCAAGAGCAAGAGCGGCCACGCCATCGGTCATCACCATGGGCAGTGGGCGATGGCAGACTCCCCGCCGGTCACCAGCGTCCCCGTGGAGGTGGAGAGCGCCCGGGACAGCAATGGGGGCGCGTACTACGACAAGCTGGAACCGCTCGGTAACACCTGCAATGGGAAGGATCGTCCGAAGCTGTCCCAGCACAAGACGGCAATGTACGACAGTACGATCGGGTTTCTGCCCGGTGGTTCGGCTGGCGCAGAGAATGGAACGGGTTCGCGCAAAAGCT-CAACTCGGACTCGTTCGACGGCATCGAGAATGAAATCCGGTGTCCGTTCTGTGATTGGATTTGTCATGGTGATCCCACCCAACTAGACAAACACTACTGGAAGGCGTGCCCGGTGCTGACGAAATGTCCCCAGTGTAGCCAGATACTTGAGGTGGCGGCACTCTCCGGACATCTAATACATGAATGCGAGGCCAAAGCGAGCTACTTGT-CCTGCGAACGGTGCAC-GGAATCGGTACACAAGGATCTCTACGAGTACCACCTGATGGAGGACTTTTGCCGCGAGCTTACGACAGGGGCAGCCCGATGTCCACTGTGCCACGATGATGTACTCCTTCCGCTGGACGGTGGCTGGAAGCGGCATCTACTCAGCCGTGCCGGATGCCTTGGCAATACCCGGCGTCGTGCTCCTACTCAGTGATTGCGGTACTGCCGGGCCCCGGATATCCTACTTAAACCCACGTTTTTCAATCAAATTCTCCTGGTGCACGATTTAGGTAGAAATGTAATGCAATCAGTGGTGTTAGCATCTTAACAAAGCAACAAGTAAAGGTAAAGGCAAAACAGTGGTAGCATTTTTCGTCGGACGATCTTTAACAAGGTATAGAAGCATTAGCAAACATCTCTAGCGAATGTAGGAAGGCTAAGAAAGATACTACTTAAAACAAAACAAAAACGAAGAGACTTATGTGCTAAGGCATTTGCATGATGATTAGCAGCTATTTTATGACACATCGTTTGATTGCCAATCGGATGGAAGTTGCTTCTTTGTCGCACACCTCTTTACAGGAGGGACTCGCTTCGAGCGAAGGAGCCTCAGCGATTTGACACACTCACACAAACACAGGGCCACACAGCTGTAACGCAGAAGACTTCTCGAAATGCCAGTGCGCTAGCCACAATTCGTTGCTAAGCTTAATGGAACACGAACCAAACGAACTCGAGTGAAATCAACCCCTCCCCATACATCCTTTTGGGGGGAAAAAAAATCAGAAATGTTAGAAAACAGATTGTTTGCTAAGCAAAAAGTTTTACGGTACCAAAACGTACGTTCTTTGGCGCAGCAAAACCCGCACATTCGCGAGGGTTATCGCAGTTAAGGGTATAATTACTATTAGCAGTTTTACAAATACTTTTATCGGTAGTATGAATTTTGTTGTTTAGATTTTTTAACAGCCTGCGATAGCAGATTTAACTTGCGACGGAAAGTACACCCATACAGATCAAACCGGCAACGGTCACGTTTATCTCTAATCTCAATCAAAAACAATTTTGATCTCACGGCCGTCCGGTGTCGGTTTAGTAGTGGTGATACTAAGGTATTGAGTATTACGTACACTGATAAGCATAAAGCAAAAGAAAAAAAAAAAACAAAAACAAAATACAAACAAACAAAATCACGATATGTCCAGCTCGAAGAATTCGGATCAAGTAAACTTATTTCCCGTCCTTTAAAAAAAGAAAAAAAAAATCACCAAGAGTATACCAAAAGATCA] [+] EMBL BM599748 [CCGCGCAACAAGAGCCAGCGCTACGATGGCCGCACAATCGATACCCACTCGAGCCCGGTCCGGCGGCTGGATGCGACGACGGCGGGCATCATCAAGAGCAAGAGCGGCCACGCCATCGGTCATCACCATGGGCAGTGGGCGATGGCAGACTCCCCGCCGGTCACCAGCGTCCCCGTGGAGGTGGAGAGCGCCCGGGACAGCAATGGGGGCGCGTACTACGACAAGCTGGAACCGCTCGGTAACACCTGCAATGGGAAGGATCGTCCGAAGCTGTCCCAGCACAAGACGGCAATGTACGACAGTACGATCGGGTTTCTGCCCGGTGGTTCGGCTGGCGCAGAGAATGGAACGGGTTCGCGCAAAAGCTCCAACTCGGACTCGTTCGACGGCATCGAGAATGAAATCCGGTGTCCGTTCTGTGATTGGATTTGTCATGGTGATCCCACCCAACTAGACAAACACTACTGGAAGGCGTGCCCGGTGCTGACGAAATGTCCCCAGTGTAGCCAGATACTTGAGGTGGCGGCACTCTCCGGACATCTAATACATGAATGCGAGGCCAAAGCGAGCTACTTGTCCCTGCGAACGGTGCACGGGAATCGGTACACAAGGATCTCTACGAGTACCACCTGATGGAGGACTTTTGCCGCGAGCTTACGACAGGGGCAGC ] [+] EMBL CNS08QGY [ tctggT CAACACCCACTCGTTCGACGGCATCGAGAATGAAATCCGGTGTCCGTTCTGTGATTGGATTTGTCATGGTGATCCCACCCAACTAGACAAACACTACTGGAAGGCGTGCCCGGTGCTGACGAAATGTCCCCAGTGTAGCCAGATACTTGAGGTGGCGGCACTCTCCGGACATCTAATACATGAATGCGAGGCCAAAGCGAGCTACTTGT CCTGCGAACGGTGCAC GGAATCGGTACACAAGGATCTCTACGAGTACCACCTGATGGAGGACTTTTGCCGCGAGCTTACGACAGGGGCAGCCCGATGTCCACTGTGCCACGATGATGTACTCCTTCCGCTGGACGGTGGCTGGAAGCGGCATCTACTCAGCCGTGCCGGATGCCTTGGCAATACCCGGCGTCGTGCTCCTACTCAGTGATTGCGGTACTGCCGGGCCCCGGATATCCTACTTAAACCCACGTTTTTCAATCAAATTCTCCTGGTGCACGATTTAGGTAGAAATGTAATGCAATCAGTGGTGTTAGCATCTTAACAAAGCAACAAGTAAAGGTAAAGGCAAAACAGTGGTAGCATTTTTCGTCGGACGATCTTTAACAAGGTATAGAAGCATTAGCAAACATCTCTAGCGAATGTAGGAAGGCTAAGAAAGATACTACTTAAAACAAAACAAAAACGAAGAGACTTATGTGCTAAGGCATTTGCATGATGATTAGCAGCTATTTTATGACACATCGTTTGATTGCCAATCGGATGGAAGTTGCTTCTTTGTCGCACACCTCTTTACAGGAGGGACTCGCTTCGAGCGAAGGAGCCTCAGCGATTTGACACACTCACACAAACACAGGGCCACACAGCTGTAACGCAGAAGACTTCTCGAAATGCCAGTTCGCTA CCACAATTCGTTGCTAAGCTTAATGGAACACGAACCAAACGAACTCGAGTGAAAT ] [+] EMBL BX627009 [ AGGATCTCTACGAGTACCACCTGATGGAGGACTTTTGCCGCGAGCTTACGACAGGGGCAGCCCGATGTCCACTGTGCCACGATGATGTACTCCTTCCGCTGGACGGTGGCTGGAAGCGGCATCTACTCAGCCGTGCCGGATGCCTTGGCAATACCCGGCGTCGTGCTCCTACTCAGTGATTGCGGTACTGCCGGGCCCCGGATATCCTACTTTTTCCCACGTTTTTCAATCAAATTCTCCTGGTGCACGATTTAGGTAGAAATGTAATGCAATCAGTGGTGTTAGCATCTTAACAAAGCAACAAGTAAAGGTAAAAGCAAAACAGTGGTAGCATTTTTCGTCGGACGATCTTTAACAAGGTATAGAAGCATTAGCAAACATCTCTAGCGAATGTAGGAAGGCTAAGAAAGATACTACTTAAAACAAAACAAAAACGAAGAGACTTATGTGCTAAGGCATTTGCATGATGATTAGCAGCTATTTTATGACACATCGTTTGATTGCCAATCGGATGGAAGTTGCTTCTTTGTCGCACACCTCTTTACAGGANGGACTCGCTTCGAGCGAANGAGCCTCAGCGATTTGACACACTCACACAAACACAGGGCCACACAGCTGTAACGCAGAAGACTTCTCGAAATGNCAGTGCGCTAGCCACAATTCGTTGCTAAGCTTAATGGAACACGAACC AACGAACTCGAGTGAAATCAACCCCTCCCCATACATCCT ] [-] EMBL CNS08QGZ [ AGTAAAGGTAAAGGCAAAACAGTGGTAGCATTTTTCGTCGGACGATCTTTAACAAGGTATAGAAGCATTAGCAAACATCTCTAGCGAATGTAGGAAGGCTAAGAAAGATACTACTTAAAACAAAACAAAAACGAAGAGACTTATGTGCTAAGGCATTTGCATGATGATTAGCAGCTATTTTATGACACATCGTTTGATTGCCAATCGGATGGAAGTTGCTTCTTTGTCGCACACCTCTTTACAGGAGGGACTCGCTTCGAGCGAAGGAGCCTCAGCGATTTGACAAACTCACACAAACACAGGGCCACACAGCTGTAACGCAGAAGACTTCTCGAAATGCCAGTGCGCTAGCCACAATTCGTTGCTAAGCTTAATGGAACACGAACCAAACGAACTCGAGTGAAATCAACCCCTCCCCATACATCCTTTTGGGGGGAAAAAAAATCAGAAATGTTAGAAAACAGATTGTTTGCTAAGCAAAAAGTTTTACGGTACCAAAACGTACGTTCTTTGGCGCAGCAAAACCCGCACATTCGCGAGGGTTATCGCAGTTAAGGGTATAATTACTATTAGCAGTTTTACAAATACTTTTATCGGTAGTATGAATTTTGTTGTTTAGATTTTTTAACAGCCTGCGATAGCAGATTTAACTTGCGACGGAAAGTACACCCATACAGATCAAACCGGCAACGGTCACGTTTATCTCTAATCTCAATCAAAAACAATTTTGATCTCACGGCCGTCCGGTGTCGGTTTAGTAGTGGTGATACTAAGGTATTGAGTATTACGTACACTGATAAGCATAAAGCAAAAGAAAAAAAAAAAACAAAAACAAAATACAAACAAACAAAATCACGATATGTCCAGCTCGAAGAATTCGGATCAAGTAAACTTATTTCCCGTCCTTTAAAAAAAGAAAAAAAAAATCACCAAGAGTATACCAAAAGATCA] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||