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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 923 fasta sequence
[GGTCTGTTTATCTCCGCTCGGCGAAGATGGTCCTTCGAGCCGGATCGAAACGGCAAACAGGGGCCATTTTAAAAGTCTCGCTCTGCATACGCGTTGTGTTTCC-CACAGGGATGATCGTGGATTTTGCAGGAACCTGTTGCTGCAACAGCATACACACAGTGCAGGCAAACGGAAGGCATCTATGTGTGAGTGTGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGAAAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCGCGCCTACATGACTGCAGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGGGAACTGGTGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTGAAACGCCCGAGGTGATCAATGGCGTTGACATTCCACCGGACAGCTGAGAAGTAGAGCCACGGTGAGAGAGACCAACGGTACGTCATGGTCAAGCTCCGCTCACTCTCTATCAAACGCACACATCCACACATATAGTCACACACACACATACGAGAGTGCGCCCAAGAATGTTTGAAAAACAAAGCGTCACAGTGGCTCACTAATCGGACTACATCTCGAACGGCGGGGCGGTATCGATGGACAGTCGAGCGCCCACGCACAGGTTCCCTTATCACGCCCGGCTAGATTGAAAATGCGCACTGTGTAGTCGTGTGTCGTGAAAGCCACCGCAACACCGAAGTAATGCGACGCGGAATAAGC]
[+] EMBL CNS08WH4 [GGTCTGTTTATCTCCGCTCGGCGAAGATGGTCCTTCGAGCCGGATCGAAACGGCAAACAGGGGCCATTTTAAAAGTCTCGCTCTGCATACGCGTTGTGTTTCC CACAGGGACGATCGTGGATTTTGCAGGAACCTGTTGCTGCAACAGCATACACACAGTGCAGGCAAACGGAAGGCATCTATGTGTGAGTGTGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGAAAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCGCGCCTACATGACTGCAGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGGGAACTGGTGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTGAAACGCTCGAGGTGATCAATGGCGTTGACATTCCACCGGACAGCTGAGAAGTAGAGCCACGGTGAGAGAGACCAACGGTACGTCATGGTCAAGCTCCGCTCACTCTCTATCAAACGCACACATCCACACATATAGTCACACACACACATACGAGAGTGCGCCCAAGAATGTTTGAAAAACAAAGCGTCACAGTGGCTCACTAATCGGACTACATCTCGAACGGCGGGGCGGTATCGATGGACAGTCGAGCGCCCACGCACAGGTTCCCTTATCACGCCCGGCTAGATTGAAAATGCGCACTGTGTAGTCGTGTGTCGTGAAAGCCACCGCAACACCGAAGTAATGCGACGCGGAATAA ]
[+] EMBL CNS090I2 [ GTCCTTCGAGCCGGATCGAAACGGCAAACAGGGGCCATTTTAAAAGTCTCGCTCTGCATACGCGTTGTGTTTCC CACAGGGATGATCGTGGATTTTGCAGGAACCTGTTGCTGCAACAGCATACACACAGTGCAGGCAAACGGAAGGCATCTATGTGTGAGTGTGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGAAAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCGCGCCTACATGACTGCAGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGGGAACTGGTGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTG AACGTCCGAGGTGATCAATGGCGTTGACATTCCACCGGACAGCTGAGAAGTAGAGCCACGGTGAGAGAGACCAACGGTACGTCATGGTCAAGCTCCGCTCACTCTCTATCAAACGCACACATCCACACATATAGTCACACACACACATACGAGAGTGCGCCCAAGAATGTTTGAAAAACAAAGCGTCACAGTGGCTCACTAATCGGACTACATCTCGAACGGCGGGGCGGTATCGATGGACAGTCGAGCGCCCACGCACAGGTTCCCTTATCACGCCCGGCTAGATTGAAAATGCGCACTGTGTAGTCGTGTGTTGTGAAAGCCACCGCAACACCGAAGTAATGCGACGCGGAATAAGC]
[-] EMBL CNS090I3 [ AGTCTCGCTCTGCATACGCGTTGTGTTTCCACACAGGGATGATCGTGGATTTTGCAGGAACCTGTTGCTGCAACAGCATACACACAGTGCAGGCAAACGGAAGGCATCTATGTGTGAGTGTGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGAAAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCG TCGCGCCTACATGACTGCAGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGACACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGGGAACTGGTGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTGAAACGACCGAGGTGATCAATGGCGTTGACATTCCACCGGACAGCTGAGAAGTAGAGCCACGGTGAGAGAGACCAACGGTACGTCATGGTCAA CTCCGCTCACTCTCTATCAAACGCACACATCCACACATATAGTCACACACACACATACGAGAGTGCGCCCAAGAATGTTTGAAAAACAAAGCGTCACAGTGGCTCACTAATCGGACTACAT ]
consensusID : consensus_5755#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence
[ACGGCACGAGGTCTATTNTATGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGNGNAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCNNGCCTACATGATTGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGGGAACTGGCGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTGAAACGATCGAGGTGATCAATGGCGTTGACATTNTCCACCGGACAGCTGAGAAGTAGAGCCCACGGTGAGAGA]
[+] EMBL BX619689 [ACGGCACGAGGTCTATTNTATGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGNGNAGGTTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCNNGCCTACATGATTGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAGGTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAATTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGGGAACTGGCGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTTAAACAATGATCGCCGTGGAAAAGTGAAACGATCGAGGTGATCAATGGCGTTGACATTNTCCACCGGACAGCTGAGAAGTAGAGCCCACGGTGAGAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5755#0 GGTCTGTTTATCTCCGCTCGGCGAAGATGGTCCTTCGAGCCGGATCGAAACGGCAAACAG 60
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 GGGCCATTTTAAAAGTCTCGCTCTGCATACGCGTTGTGTTTCCCACAGGGATGATCGTGG 120
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 ATTTTGCAGGAACCTGTTGCTGCAACAGCATACACACAGTGCAGGCAAACGGAA-GGCAT 179
consensus_5755#1 ------------------------------------------------ACGGCACGAGGT 12
**** * * *
consensus_5755#0 CTATGTGTGAGTGTGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGA-AAGG 238
consensus_5755#1 CTATTN-----TATGTGTGTGTGTGTGTGTATACCTGACCCACAGTCTGTCCCGNGNAGG 67
**** * ***************************************** ***
consensus_5755#0 TTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCGC 298
consensus_5755#1 TTCACCCCGACGTTGCCCGTAATTACGTCATGAGCTTTCGGTGTGTGTGAGTGCGCTCNN 127
**********************************************************
consensus_5755#0 GCCTACATGACTGCAGCAGCAGCAGCAGCAGCAACAGCAGACTACCTGCCCTTCTAATAG 358
consensus_5755#1 GCCTACATGATTGCAGCAGCAGCAGCAGC---AACAGCAGACTACCTGCCCTTCTAATAG 184
********** ****************** ****************************
consensus_5755#0 GTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAA 418
consensus_5755#1 GTAAAATTCCATCCTCTTCCAAGCCAGACATGTGGCCAGGCTAGATGGTTTCAGTGTTAA 244
************************************************************
consensus_5755#0 TTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGA 478
consensus_5755#1 TTGAAACAAGTACGCCACGACAAGCAGAAAGTTTGTGTGTGTGTGAG----------AGA 294
********************************************* * **
consensus_5755#0 GAGAGAGAGAAAGGGAACTGGTGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTT 538
consensus_5755#1 GAGAGAGAGAAAGGGAACTGGCGAGAGAAAGAGAAGACGCTGGAGAAGAAAAAGAAAGTT 354
********************* **************************************
consensus_5755#0 AAACAATGATCGCCGTGGAAAAGTGAAACGCCCGAGGTGATCAATGGCGTTGACATTC-- 596
consensus_5755#1 AAACAATGATCGCCGTGGAAAAGTGAAACGATCGAGGTGATCAATGGCGTTGACATTNTC 414
****************************** *************************
consensus_5755#0 CACCGGACAGCTGAGAAGTAGAGCC-ACGGTGAGAGAGACCAACGGTACGTCATGGTCAA 655
consensus_5755#1 CACCGGACAGCTGAGAAGTAGAGCCCACGGTGAGAGA----------------------- 451
************************* ***********
consensus_5755#0 GCTCCGCTCACTCTCTATCAAACGCACACATCCACACATATAGTCACACACACACATACG 715
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 AGAGTGCGCCCAAGAATGTTTGAAAAACAAAGCGTCACAGTGGCTCACTAATCGGACTAC 775
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 ATCTCGAACGGCGGGGCGGTATCGATGGACAGTCGAGCGCCCACGCACAGGTTCCCTTAT 835
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 CACGCCCGGCTAGATTGAAAATGCGCACTGTGTAGTCGTGTGTCGTGAAAGCCACCGCAA 895
consensus_5755#1 ------------------------------------------------------------
consensus_5755#0 CACCGAAGTAATGCGACGCGGAATAAGC 923
consensus_5755#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||