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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5757#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 970 fasta sequence
[CCGGGTGGCCCTCGGTAGGGCAACAACGGAAGAAGTCGAGAAAAAATCGACTGCTGCGCGTCGCGAATAGTGCGTGTGGCTCAGTAAAATGTTTTCTCTCAATTGCAGCACAAGTCGGCGAAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGCTATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCACTCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAAAGGACTCGTTGACGGCGCTCGACAACGAGTGTCGTTGTTACCAACACGTGCGACACGAAGAGACCGAGATGGAGATTGAGGATGAGGTCGATATCTTGATGTCGAGCGACATCCTTGCGGCGCAGATGTCAACGAAGGGTATCAGTTTCACGAAAGCACAATCCGGCTGGATCTTTCGCGAGGATCGGCGGGAAACAGTGGCCGGACAGTACGACAGTGATCTCTACACAATAAACGGGCTGACGCTGGAGCAGCGCAAGCGCCGCGAACACTTATCTCGAGACGATCTGCAGAAAAACAAAGCGCTGAT]
[+] EMBL BM644666 [CCGGGTGGCCCTCGGTAGGGCAACAACGGAAGAAGTCGAGAAAAAATCGACTGCTGCGCGTCGCGAATAGTGCGTGTGGCTCAGTAAAATGTTTTCTCTCAATTGCAGCACAAGTCGGCGAAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGCTATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCACTCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTC ]
[+] EMBL BM605994 [ ccgGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAAAGGACTCGTTGACGGCGCTCGACAACGAGTGTCGTTGTTACCAACACGTGCGACACGAAGAGACCGAGATGGAGATTGAGGATGAGGTCGATATCTTGATGTCGAGCGACATCCTTGCGGCGCAGATGTCAACGAAGGGTATCAGTTTCACGAAAGCACAATCCGGCTGGATCTTTCGCGAGGATCGGCGGGAAACAGTGGCCGGACAGTACGACAGTGATCTCTACACAATAAACGGGCTGACGCTGGAGCAGCGCAAGCGCCGCGAACACTTATCTCGAGACGATCTGCAGAAAAACAAAGCGCTGAT]
consensusID : consensus_5757#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 668 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGTGTTCGTGGAGCACAAGTCGGCGAAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGCTATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCACTCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAAAGGACTCGTTGACGGCGCTCGACAACGAAGTGTCGTTGTTACCAACACGTGCGACACGAAGAGACCGAGATGGAGATT]
[+] EMBL BM641644 [CCGCCCACGCGTCCGCCCACGCGTCCGTGTTCGTGGAGCACAAGTCGGCGAAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGCTATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCACTCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAAAGGACTCGTTGACGGCGCTCGACAACGAAGTGTCGTTGTTACCAACACGTGCGACACGAAGAGACCGAGATGGAGATT]
[+] EMBL BM603451 [ ccgatgcTGTTCGTGGAGCACAAGTCGGCGAAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGCTATCGCTGCTGCTCCGGACTCACGAAATAGCCGAAAAGGACAAACATGGAAACACTCCACTCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCGCACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCAGAAGCGATCTCATACGGAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAATGGAACAACGTCGCCCGAACCTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGGAGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACGTGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGATTTTTCCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAAAGGACTCGTTGACGGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5757#0 CCGGGTGGCCCTCGGTAGGGCAACAACGGAAGAAGTCGAGAAAAAATCGACTGCTGCGCG 60
consensus_5757#1 ------------------------------------------------------------
consensus_5757#0 TCGCGAATAGTGCGTGTGGCTCAGTAAAATGTTTTCTCTCAATTGCAGCACAAGTCGGCG 120
consensus_5757#1 -------CCGCCCACGCGTC-CGCCCACGCGTCCGTGTTCG--TGGAGCACAAGTCGGCG 50
* * * * * * * ** ** ** **************
consensus_5757#0 AAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGC 180
consensus_5757#1 AAATAATGACGGACTCGTTTCCGCTGCATGAGTGCGTCTTTAACGGTGATACCCGTAAGC 110
************************************************************
consensus_5757#0 TATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCAC 240
consensus_5757#1 TATCGCTGCTGCTCCGGACTCACGAAATAGCTGAAAAGGACAAACATGGAAACACTCCAC 170
************************************************************
consensus_5757#0 TCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCG 300
consensus_5757#1 TCCATTTGGCTGTTATGCTGGGAAAGAAAGAATGTATCTTCTTATTGCTTGCACATGGCG 230
************************************************************
consensus_5757#0 CACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACG 360
consensus_5757#1 CACCGGTTAAAGTGAAAAATTCTCAAGGATGGTCACCCCTAGCGGAAGCGATCTCATACG 290
************************************************************
consensus_5757#0 GAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAA 420
consensus_5757#1 GAGATCGTCAAATAATAAGTTCACTGTTGCGCAAATTGAAGCAACAGGCACGCGAACAAA 350
************************************************************
consensus_5757#0 TGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGG 480
consensus_5757#1 TGGAACAACGTCGCCCGAACTTGGTGAAAGCCCTAAAGCAGATGGGTGACTTCTACATGG 410
************************************************************
consensus_5757#0 AGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACG 540
consensus_5757#1 AGCTCAAGTGGGACTTTCATTCCTGGGTGCCACTTATCTCCCGTATCCTTCCCTCTGACG 470
************************************************************
consensus_5757#0 TGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTT 600
consensus_5757#1 TGTGCAAAATTCACAAATCCGGCTGTTCGATCCGGCTGGATACGACGCTGGTTGACTTTT 530
************************************************************
consensus_5757#0 CCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAA 660
consensus_5757#1 CCGATATGCGCTGGGAGCGTGGCGACATCTCGTTCATTTTCAAAGGCGATAACCCTCCAA 590
************************************************************
consensus_5757#0 AGGACTCGTTGACGGCGCTCGACAACGA-GTGTCGTTGTTACCAACACGTGCGACACGAA 719
consensus_5757#1 AGGACTCGTTGACGGCGCTCGACAACGAAGTGTCGTTGTTACCAACACGTGCGACACGAA 650
**************************** *******************************
consensus_5757#0 GAGACCGAGATGGAGATTGAGGATGAGGTCGATATCTTGATGTCGAGCGACATCCTTGCG 779
consensus_5757#1 GAGACCGAGATGGAGATT------------------------------------------ 668
******************
consensus_5757#0 GCGCAGATGTCAACGAAGGGTATCAGTTTCACGAAAGCACAATCCGGCTGGATCTTTCGC 839
consensus_5757#1 ------------------------------------------------------------
consensus_5757#0 GAGGATCGGCGGGAAACAGTGGCCGGACAGTACGACAGTGATCTCTACACAATAAACGGG 899
consensus_5757#1 ------------------------------------------------------------
consensus_5757#0 CTGACGCTGGAGCAGCGCAAGCGCCGCGAACACTTATCTCGAGACGATCTGCAGAAAAAC 959
consensus_5757#1 ------------------------------------------------------------
consensus_5757#0 AAAGCGCTGAT 970
consensus_5757#1 -----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||