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Anopheles gambiae
cluster # 5785 cluster # 5785       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5785#0 length = 1422 sequences # 4  

consensusID : consensus_5785#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1422
fasta sequence
                              [GGTCATGCATATCGTGTCGCCGTACCCGGTCGGGGGCGGTGGTAGCAGGTCCTGGGGGGACGGGGTCGGCGTCGGCTGCGACGTCACCGCGTTCGAGTTTACCACGTTCGACGTTTTCCTTCGCTTTTTCGGATTGCTCGGGGCGGATATCGGGAGCTGGGGCGATTCCGAGGGCGATTTGAAATCTGGCGGACAGAGTCCGGGTCCTGGTAGCCGGTACGACGCCATGCCCAGGTTGTGTGTCATACTACTGCGCGTTAGTGCAACAAGCTACGCACGCAGGTCCCACTCTCGCTCTCTCTCTCTCTCTCTCTCTCACTCTCTTTTGCGTGCCTCGACGCTTTTTGTGTTTTCGTTTGCTTTATGGTGCAACAAAACAGGACGACGTCAACGGATTCCTTG-CCGCCGCTGTCGCGATCTTTGTGTGTAGCCGGTGTTTACGTACCGCCAAACCACCATTACAGCTCGCTGCACTTCCCTTGCCTCATCACTTCACTGCACAGCAGTCTCTCTCACTCTTTCGCTCTCTTTGCCTCTGG-CCGATCAAACGATCTTTAAATGCACAACGATCAATCAATCGTATCCGAAACGTACACAAGCTGTCCTTACAATACAAACGCACAGTACACACATATTTCACACATCGGAACGGACATCCCGTTCGTGT-CTCGTCCACTTTCACACACGCACACACACACACACACA-CGCAAACGGAGGAGATACTAGCGCGGAAACAGCGATAAGCTGCGGCCACAACTGTCTAAATACTAGTAATACGATCCCTCAGCAGCACTGCACTTTGTCGGTACGGGATTATTATTATTATTATTATTATCTAAAATATTGCTCATATGATGTGTTTGCTTCCGATTGTTTTCATTCACTTTCACACTGCTGCTGCCGCGCGTTATCATTGCCGTGCGTGCCCCCAGCCAGATTCATCGGTCCGTCGTCTGCAGGCAGCACCACCGGCTACGGCTGGCACGTGAAACTGGCTCATCCATCGATGTACGTACTAATCCCTTGCAAACGGATTGGCTGTTGCTGCCCAGTCCAACAATGCGGTGCGTGTTTCAATCGTTCAATGTTTTTAGTATCATTCGCTTGCCACTGTTTGCTGAGGAGGCTGGGTTAACAATCTATTCCGATCGGTTTTATCGAATAATCATCACACACACACATTCCCTTTCCCTGGCTGGCCACACTGAAAAAACCGTCGCTGCGAGAGTGTCGTTTACGTTGTGTTTTCTTCTTCGCGCTTCCTTTTCGCCCCCTTTTCGTGTACTGCCGGACTGCCGCACCACTACACGTTTATGCTCGAAAGCGCGCACACACACACATGCACACACGCGCGCATACGTTCATGCAATACCGCACCGTCGATGAATGGAACCCCCCCGTCCCTTGACCGTCTTTCGCCGG]

[+] EMBL CNS08O4N             [GGTCATGCATATCGTGTCGCCGTACCCGGTCGGGGGCGGTGGTAGCAGGTCCTGGGGGGACGGGGTCGGCGTCGGCTGCGACGTCACCGCGTTCGAGTTTACCACGTTCGACGTTTTCCTTCGCTTTTTCGGATTGCTCGGGGCGGATATCGGGAGCTGGGGCGATTCCGAGGGCGATTTGAAATCTGGCGGACAGAGTCCGGGTCCTGGTAGCCGGTACGACGCCATGCCCAGGTTGTGTGTCATACTACTGCGCGTTAGTGCAACAAGCTACGCACGCAGGTCCCACTCTCGCTCTCTCTCTCTCTCTCTCTCTCACTCTCTTTTGCGTGCCTCGACGCTTTTTGTGTTTTCGTTTGCTTTATGGTGCAACAAAACAGGACGACGTCAACGGATTCCTTG CCGCCGCTGTCGCGATCTTTGTGTGTAGCCGGTGTTTACGTACCGCCAAACCACCATTACAGCTCGCTGCACTTCCCTTGCCTCATCACTTCACTGCACAGCAGTCTCTCTCACTCTTTCGCTCTCTTTGCCTCTGG CCGATCAAACGATCTTTAAATGCACAACGATCAATCAATCGTATCCGAAACGTACACAAGCTGTCCTTACAATACAAACGCACAGTACACACATATTTCACACATCGGAACGGACATCCCGTTCGTGT CTCGTCCACTTTCACACACGCACACACACACACACACA CGCAAACGGAGGAGATACTAGCGCGGAAACAGCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08O4M             [                                                                                                                                                                                                                                                                                ACGCACGCAGGTCCCACTCTCGCTCTCTCTCTCTCTCTCTCTCTCACTCTCTTTTGCGTGCCTCGACGCTTTTTGTGTTTTCGTTTGCTTTATGGTGCAACAAAACAGGACGACGTCAACGGATTCCTTGCCCGCCG TGTCGCGATCTTTGTGTGTAGCCGGTGTTTACGTACCGCCAAACCACCATTACAGCTCGCTGCACTTCCCTTGCCTCATCACTTCACTGCACAGCAGTCTCTCTCACTCTTTCGCTCTCTTTGCCTCTGGACCGATCAAACGATCTTTAAATGCACAACGATCAATCAATCGTATCCGAAACGTACACAAGCTGTCCTTACAATACAAACGCACAGTACACACATATTTCACACATCGGAACGGACATCCCGTTCGTGTACTCGTCCACTTTCACACACGCACACACACACACACACAGCGCAAACGGAGGAGATACTAGCGCGGAAACAGCGATAAGCTGCGGCCACAACTGTCTAAATACTAGTAATACGATCCCTCAGCAGCACTGCACTTTGTCGGTACGGGATTATTATTATTATTATTATTATCTAAAATATTGCTCATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BM610484             [                                                                                                                                                                                                                                                                                                                                                                                                               TTG CCGCCGCTGTCGCGATCTTTGTGTGTAGCCGGTGTTTACGTACCGCCAAACCACCATTACAGCTCGCTGCACTTCCCTTGCCTCATCACTTCACTGCACAGCAGTCTCTCTCACTCTTTCGCTCTCTTTGCCTCTGG CCGATCAAACGATCTTTAAATGCACAACGATCAATCAATCGTATCCGAAACGTACACAAGCTGTCATTACAATACAAACGCACAGTACACACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM606331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gtcCACACACACG CGCAAACGTAGGAGATACTAGCGCGGAAACAGCGATAAGCTGCGGCCACAACTGTCTAAATACTAGTAATACGATCCCTCAGCAGCACTGCACTTTGCCGGTACG     A CATTATTATTATTATTATCTAAAATATTGCTCATATGATGTGTTTGCTTCCGATTGTTTTCATTCACTTTCACACTGCTGCTGCCGCGCGTTATCATTGCCGTGCGTGCCCCCAGCCAGATTCATCGGTCCGTCGTCTGCAGGCAGCACCACCGGCTACGGCTGGCACGTGAAACTGGCTCATCCATCGATGTACGTACTAATCCCTTGCAAACGGATTGGCTGTTGCTGCCCAGTCCAACAATGCGGTGCGTGTTTCAATCGTTCAATGTTTTTAGTATCATTCGCTTGCCACTGTTTGCTGAGGAGGCTGGGTTAACAATCTATTCCGATCGGTTTTATCGAATAATCATCACACACACACATTCCCTTTCCCTGGCTGGCCACACTGAAAAAACCGTCGCTGCGAGAGTGTCGTTTACGTTGTGTTTTCTTCTTCGCGCTTCCTTTTCGCCCCCTTTTCGTGTACTGCCGGACTGCCGCACCACTACACGTTTATGCTCGAAAGCGCGCACACACACACATGCACACACGCGCGCATACGTTCATGCAATACCGCACCGTCGATGAATGGAACCCCCCCGTCCCTTGACCGTCTTTCGCCGG]


>consensus_5785#0 GGTCATGCATATCGTGTCGCCGTACCCGGTCGGGGGCGGTGGTAGCAGGTCCTGGGGGGA CGGGGTCGGCGTCGGCTGCGACGTCACCGCGTTCGAGTTTACCACGTTCGACGTTTTCCT TCGCTTTTTCGGATTGCTCGGGGCGGATATCGGGAGCTGGGGCGATTCCGAGGGCGATTT GAAATCTGGCGGACAGAGTCCGGGTCCTGGTAGCCGGTACGACGCCATGCCCAGGTTGTG TGTCATACTACTGCGCGTTAGTGCAACAAGCTACGCACGCAGGTCCCACTCTCGCTCTCT CTCTCTCTCTCTCTCTCACTCTCTTTTGCGTGCCTCGACGCTTTTTGTGTTTTCGTTTGC TTTATGGTGCAACAAAACAGGACGACGTCAACGGATTCCTTGCCGCCGCTGTCGCGATCT TTGTGTGTAGCCGGTGTTTACGTACCGCCAAACCACCATTACAGCTCGCTGCACTTCCCT TGCCTCATCACTTCACTGCACAGCAGTCTCTCTCACTCTTTCGCTCTCTTTGCCTCTGGC CGATCAAACGATCTTTAAATGCACAACGATCAATCAATCGTATCCGAAACGTACACAAGC TGTCCTTACAATACAAACGCACAGTACACACATATTTCACACATCGGAACGGACATCCCG TTCGTGTCTCGTCCACTTTCACACACGCACACACACACACACACACGCAAACGGAGGAGA TACTAGCGCGGAAACAGCGATAAGCTGCGGCCACAACTGTCTAAATACTAGTAATACGAT CCCTCAGCAGCACTGCACTTTGTCGGTACGGGATTATTATTATTATTATTATTATCTAAA ATATTGCTCATATGATGTGTTTGCTTCCGATTGTTTTCATTCACTTTCACACTGCTGCTG CCGCGCGTTATCATTGCCGTGCGTGCCCCCAGCCAGATTCATCGGTCCGTCGTCTGCAGG CAGCACCACCGGCTACGGCTGGCACGTGAAACTGGCTCATCCATCGATGTACGTACTAAT CCCTTGCAAACGGATTGGCTGTTGCTGCCCAGTCCAACAATGCGGTGCGTGTTTCAATCG TTCAATGTTTTTAGTATCATTCGCTTGCCACTGTTTGCTGAGGAGGCTGGGTTAACAATC TATTCCGATCGGTTTTATCGAATAATCATCACACACACACATTCCCTTTCCCTGGCTGGC CACACTGAAAAAACCGTCGCTGCGAGAGTGTCGTTTACGTTGTGTTTTCTTCTTCGCGCT TCCTTTTCGCCCCCTTTTCGTGTACTGCCGGACTGCCGCACCACTACACGTTTATGCTCG AAAGCGCGCACACACACACATGCACACACGCGCGCATACGTTCATGCAATACCGCACCGT CGATGAATGGAACCCCCCCGTCCCTTGACCGTCTTTCGCCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)