These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5966#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 974 fasta sequence [GGAATTCCTCGAGAACTGTTGGCCTACTGGGTGTTTCGGATTTACACAAATTGCAATCAAACGATGAACAAACGCAACATTTGGAAGTATGAAGAGACGAAGGAAATGCTCCAGATCATGCAGGACAACAATTACGCCGGTGCGTTCAGCAGCAAGCACAAGCAGAACATGGAAATATTTCGCAAGATCGAGAACAAAATGATCGAGAGCGGCTATCCGTACAAAAACTACATGCAGATCGGTGTGCGGTGG-AAGAATTTGAAAAACCTCTACACGAAGGCAAAGCGTAGCAACAGCAAAAACGAGCAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCATCAGTGCACTGGATCCGGGCGAGCCGGTGAGCGTTCAAATTAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAAACACCATCCCAACCGCCACGAAGCGTTGCGGTTCAACGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGTCAGAAGAAGCCTACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAGCAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGGAACTGATCGACCGGATACAGGAGGCGACGCGGACCATGATGGAGGAAAATATGAACACATTTTTTACCCGCCTAAAGGACGTGCTGGCGGGCCCGTCCGTGCAGCAGGTTGAGGTAATCGAAACGTACGAATAAGTAGACACATTAAACGACCGATCTCGTATAGCCGTAAAGACCGTCTAGAATGAATTGGAAAATATACGTGTTGAATGTATCCTGAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCCCGAGCCCC] [-] EMBL CNS09AWD [GGAATTCCTCGAGAACTGTTGGCCTACTGGGTGTTTCGGATTTACACAAATTGCAATCAAACGATGAACAAACGCAACATTTGGAAGTATGAAGAGACGAAGGAAATGCTCCAGATCATGCAGGACAACAATTACGCCGGTGCGTTCAGCAGCAAGCACAAGCAGAACATGGAAATTTTTCGCAAGATCGAGAACAAAATGATCGAGAGCGGCTATCCGTACAAAAACTACATGCAGATCGGTGTGCGGTGG AAGAATTTGAAAAACCTCTACACGAAGGCAAAGCGTAGCAACAGCAAAAACGAGCAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCATCAGTGAACTGGATCCGGGCGAGCCGGTGAGCGTTCAAATTAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAAACACCATCCCAACCGCCACGAAGCGTTGCGGTTCAACGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGTCAGAAGAAGCCTACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAGCAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGGAACTGATCGACCGGATACAGGAGGCGACGCGGACCATGATGGAGGAAAATATGAACACATTTTTTACCCGCCTAAAGGACGTGCTG ] [-] EMBL CNS09JG1 [ GATGAACAAACGCAACATTTGGAAGTATGAAGAGACGAAGGAAATGCTCCAGATCATGCAGGACAACAATTACGCCGGTGCGTTCAGCAGCAAGCACAAGCAGAACATGGAAATATTTCGCAAGATCGAGAACAAAATGATCGAGAGCGGCTATCCGTACAAAAACTACATGCAGATCGGTGTGCGGTGG AAGAATTTGAAAAACCTCTACACGAAGGCAAAGCGTAGCAACAGCAAAAACGAGCAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCATCAGTGCACTGGATCCGGGCGAGCCGGTGAGCGTTCAAATTAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAAACACCATCCCAACCGCCACGAAGCGTTGCGGTTCAACGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGTCAGAAGAAGCCTACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAGCAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGGAACTGATCGACCGGATACAGGAGGCGACGCGGACCATGATGGAGGAAAATATGAACACATTTTTTACCCGCCTAAAGGACGTGCTGGCGGGCCCGTCCGTGCAGCAGGTTGAGGTAATCGAAACGTACGAATAAGTAGACACATTAAACGACCGATCTCGTATAGCCGTAAAGACCGTC ] [+] EMBL CNS09JG0 [ GAAATGCTCCAGATCATGCAGGACAACAATTACGCCGGTGCGTTCAGCAGCAAGCACAAGCAGAACATGGAAATATTTCGCAAGATCGAGAACAAAATGATCGAGAGCGGCTATCCGTACAAAAACTACATGCAGATCGGTGTGCGGTGG AAGAATTTGAAAAACCTCTACACGAAGGCAAAGCGTAG AACAGCAAAAACGAGCAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCATCAGTGCACTGGATCCGGGCGAGCCGGTGAGCGTTCAAATTAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAAACACCATCCCAACCGCCACGAAGCGTTGCGGTTCAACGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGTCAGAAGAAGCCTACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAGCAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGGAACTGATCGACCGGATACAGGAGGCGACGCGGACCATGATGGAGGAAAATATGAACACATTTTTTACCCGCCTAAAGGACGTGCTGGCGGGCCCGTCCGTGCAGCAGGTTGAGGTAATCGAAACGTACGAATAAGTAGACACATTAAACGACCGATCTCGTATAGCCGTAAAGACCGTCTAGAATGAATTGGAAAATATACGTGTTGAATGTATCCTGAAAAAAAAAAAAAAAAAAAAGGCCACATGTT ] [+] EMBL CNS09AWC [ GACAACAATTACGCCGGTGCGTTCAGCAGCAAGCACAAGCAGAACATGGAAATATTTCGCAAGATCGAGAACAAAATGATCGAGAGCGGCTATCCGTACAAAAACTACATGCAGATCGGTGTGCGGTGG AAGAATTTGAAAAACCTCTACACGAAGGCAAAGCGTAG AACAGCAAAAACGAGCAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCATCAGTGCACTGGATCCGGGCGAGCCGGTGAGCGTTCAAATTAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAAACACCATCCCAACCGCCACGAAGCGTTGCGGTTCAACGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGTCAGAAGAAGCCTACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAGCAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGGAACTGATCGACCGGATACAGGAGGCGACGCGGACCATGATGGAGGAAAATATGAACACATTTTTTACCCGCCTAAAGGACGTGCTGGCGGGCCCGTCCGTGCAGCAGGTTGAGGTAATCGAAACGTACGAATAAGTAGACACATTAAACGACCGATCTCGTATAGCCGTAAAGACCGTCTAGAATGAATTGGAAAATATACGTGTTGAATGTATCCTG AAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCCCC] [-] EMBL BX615047 [ GGTGGAAAGAATTGAAAAAACCTCTACACGAAGGCAAAGCGTAGCAACAGCAAAAACGAACAGCAGCTCTTCCCGTTCTACGATGAGATGGACAATCTGCTCAAACGGGTCGGCAAGAGTGTTGCTGGCGAGGAGTGCGTCAGTGCACTGGATCCGGGCGAGCCGGTGAGCGTTAAAATCAACACTTCAGCAGCGTCAGAGTTGAGTACGAGCGTGCAGGACGATACAGCATCTGTCGACAACAAACCACCATCCCAGCCGGCACGGAGCGTTGCTGTTCAGCGGGCAAGCGTGTCCACTAGCAAAACGTTAGGGCGCTATACGGCACCGGGCCAGAAGAAGCCCACGCGAAAGAACGCACTCGACACCACGATAGCGATGAGCAAACAGGAGCTTAGCGATGAGTTCTACCGCAGCCAGAAGCGGTTGATCGATTACGAGTTTAGCCTGTACGTGCGCAAGGAGGAGTAACTGATCGACCGGATACAGGAGACGACGCGGACCATGATGGAGGAAAATATGAATACATTTTTTACCCGCCTAAAGGACGTGCTGGCGGGCCCGTCCGTGCAGCAGGTTGAGGTAATCGAAACGTACGAATAAGTAGACACATTAAACGACCGATCTCGTATAGCC ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||