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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6004#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1282 fasta sequence
[CCGTAAAAACCGATTTTTGTGAAAAATAGGATATAATTCTTCGTGTACGGTGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAACAAGTGCGTACTCATTCGGGCAGCTAAAGTTGAGCCAAACAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTCGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGCTACACTGCTGGTGGGCTGATGCATGTGTGATCGCGCGCGCATGTGTGTGTGTGTGTTTGTGGTTTTCAACGTCAACGTCGTCGAAGGGCACGGCCACACAAGCCCATCCCAGTGTGAAAAGTGAGTGTGTGAAGAAGTGTACGCGCCTGCTTTGATCCGTGTGCCGTTGGCTGGCAGTGAATGTAGCAAGGTGCTTGTTTTACTCGACGAATGATTCAAGAAAGTCACCTGTGCTGACACACAAACCTCTCCCTTTCAGACACACACACGTACACATACGCGTACGTCCCTTGTTCAGATCGCCTTTTGCTCTGGGTCTTCCCCGCTCTCACGCATCCACCGCGGCTCGGTTCCAGCGGTGAGAGGACAAGGCTTTGTTCACAGACCGATCTGGGAGAGGTCAACGGGAAATACATCCCGCAAGCAAGCAACCAAATAAAAAGATTGTGTGTGTGTGTGTGAACTTCTGCTGCCGTCTTGTCGTGGCCCTGTGAGGATAGGATCCCTCTTCCCGGTTGAGGTGTAGTGTGTTTCTTGTGTGTGTGGGGGCTAGTGTATTTGCGAACCACGGACCTATCTAGGTGTGTGTGCGT]
[+] EMBL BM609222 [CCGTAAAAATACATTTTTGTGAAAAATAGGATATAATTCTTCGTGTACGGTGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAACAAGTGCGTACTCATTCGGGCAGCTAAAGTTGAGCCAAACAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTCGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGAC ]
[+] EMBL BM606445 [ CCGATTTTTGTGAAAAATAGGATATAATTCTTCGTGTACGGTGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAACAAGTGCGTACTCATTCGGGCAGCTAAAGTTGAGCCAAACAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTCGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGC ]
[+] EMBL BM580442 [ CCGATTTTTGTGAAAAATAGGATATAATTCTTCGTGTACGGTGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAACAAGTGCGTACTCATTCGGGCAGCTAAAGTTGAGCCAAACAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTCGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACC ]
[+] EMBL BM631175 [ ccgCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGCTACACTGCTGGTGGGCTGATGCATGTGTGATCGCGCGCGCATGTGTGTGTGTGTGTTTGTGGTTTTCAACGTCAACGTCGTCGAAGGGCACGGCCACACAAGCCCATCCCAGTGTGAAAAGTGAGTGTGTGAAGAAGTGTACGCGCCTGCTTTGATCCGTGTGCCGTTGGCTGGCAGTGAATGTAGCAAGGTGCTTGTTTTACTCGACGAATGATTCAAGAAAGTCACCTGTGCTGACACACAAACCTCTCCCTTTCAGACACACACACGTACACATACGCGTACGTCCCTTGTTCAGATCGCCTTTTGCTCTGGGTCTTCCCCGCTCTCACGCATCCACCGCGGCTCGGTTCCAGCGGTGAGAGGACAAGGCTTTGTTCACAGACCGATCTGGGAGAGGTCAACGGGAAATACATCCCGCAAGCAAGCAACCAAATAAAAAGATTGTGTGTGTGTGTGTGAACTTCTGCTGCCGTCTTGTCGTGGCCCTGTGAGGATAGGATCCCTCTTCCCGGTTGAGGTGTAGTGTGTTTCTTGTGTGTGTGGGGGCTAGTGTATTTGCGAACCACGGACCTATCTAGGTGTGTGTGCGT]
consensusID : consensus_6004#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[CCGGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAAGAAGTGCGTACTCATTCGAGCAGCTAAAGTTGAGCCAAAGTGCGTGCTGCAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCCGGTCCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTGGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGC]
[+] EMBL BM575792 [CCGGTCTGACGTGTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAAGAAGTGCGTACTCATTCGAGCAGCTAAAGTTGAGCCAAAGTGCGTGCTGCAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAATCTTAGTGCAAAGTGTGTCCGGTCCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCCCATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTGAGCAAAAAAGAATCACGTTATTTCACACAGTGGTGGAAGAAGTGGGATTGAATTTCAGTAGCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGCTTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGTCCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCCTCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTCATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAACGCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6004#0 CCGTAAAAACCGATTTTTGTGAAAAATAGGATATAATTCTTCGTGTACGGTGTCTGACGT 60
consensus_6004#1 -----------------------------------------------CCG-GTCTGACGT 12
* * *********
consensus_6004#0 GTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAACAAGTGCGTACTCATTCGGGCAG 120
consensus_6004#1 GTGTTTGCGAGTGGGGATTAAGAATATTTGTGTTTAAGAAGTGCGTACTCATTCGAGCAG 72
************************************* ***************** ****
consensus_6004#0 CTAAAGTTGAGCCAAA----------CAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAAT 170
consensus_6004#1 CTAAAGTTGAGCCAAAGTGCGTGCTGCAAAGAGGAAAAAACGAAGCTCAGCGCTGTGAAT 132
**************** **********************************
consensus_6004#0 CTTAGTGCAAAGTGTGTC------GGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCC 224
consensus_6004#1 CTTAGTGCAAAGTGTGTCCGGTCCGGTCCAAACGTCAAGTTCCCTCGAGAACACGCATCC 192
****************** ************************************
consensus_6004#0 CATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTG 284
consensus_6004#1 CATACGCGACAGGCAACGATTGATCGAATTGGCTGGTGAGGGCCCCGTGCTGTGTCAGTG 252
************************************************************
consensus_6004#0 AGCAAAAAAGAATCACGTTATTTCACACAGTGGTCGAAGAAGTGGGATTGAATTTCAGTA 344
consensus_6004#1 AGCAAAAAAGAATCACGTTATTTCACACAGTGGTGGAAGAAGTGGGATTGAATTTCAGTA 312
********************************** *************************
consensus_6004#0 GCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGC 404
consensus_6004#1 GCAAGTGGCGCATTTGATCAACGGTGCTGGTTTTATAACCCTCTGTGTGGATACGTGTGC 372
************************************************************
consensus_6004#0 TTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGT 464
consensus_6004#1 TTATTAGGCCCGTCAACGAAAAGTACGCAATACAAAACACACCCCAGCAGAGCACGTCGT 432
************************************************************
consensus_6004#0 CCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCC 524
consensus_6004#1 CCGTTCTGGTGTGAAAAAGTGTGTGCCCTTTCTTTCGCAGCGAGAAAACGGCGCATCGCC 492
************************************************************
consensus_6004#0 TCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTC 584
consensus_6004#1 TCCAACCATTCCTCGAGAGTGTTCTTCGGTGCAGGGCTGTCGGTGAAAAGAAGAATTCTC 552
************************************************************
consensus_6004#0 ATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAAC 644
consensus_6004#1 ATTGTGAGGCGCAAGAAGCGCAATCAGCACAACAGCCGCAGTGAGAGTGAGCATTGAAAC 612
************************************************************
consensus_6004#0 GCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGCTACACTGCTGGTGGG 704
consensus_6004#1 GCAGGAGCAAAACCAATAGTCAAGTTGTCCTCGACAAACGTCCGC--------------- 657
*********************************************
consensus_6004#0 CTGATGCATGTGTGATCGCGCGCGCATGTGTGTGTGTGTGTTTGTGGTTTTCAACGTCAA 764
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 CGTCGTCGAAGGGCACGGCCACACAAGCCCATCCCAGTGTGAAAAGTGAGTGTGTGAAGA 824
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 AGTGTACGCGCCTGCTTTGATCCGTGTGCCGTTGGCTGGCAGTGAATGTAGCAAGGTGCT 884
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 TGTTTTACTCGACGAATGATTCAAGAAAGTCACCTGTGCTGACACACAAACCTCTCCCTT 944
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 TCAGACACACACACGTACACATACGCGTACGTCCCTTGTTCAGATCGCCTTTTGCTCTGG 1004
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 GTCTTCCCCGCTCTCACGCATCCACCGCGGCTCGGTTCCAGCGGTGAGAGGACAAGGCTT 1064
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 TGTTCACAGACCGATCTGGGAGAGGTCAACGGGAAATACATCCCGCAAGCAAGCAACCAA 1124
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 ATAAAAAGATTGTGTGTGTGTGTGTGAACTTCTGCTGCCGTCTTGTCGTGGCCCTGTGAG 1184
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 GATAGGATCCCTCTTCCCGGTTGAGGTGTAGTGTGTTTCTTGTGTGTGTGGGGGCTAGTG 1244
consensus_6004#1 ------------------------------------------------------------
consensus_6004#0 TATTTGCGAACCACGGACCTATCTAGGTGTGTGTGCGT 1282
consensus_6004#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||