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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6007#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1238 fasta sequence
[TTGGAAGTTTGTTTACATCTGTGATTCGTTTTTCGGTGAATTGTACCAAAATCTCAAACGGTACAATCATCGCTCGTTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGATGTTCAGTCTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAATGAACTGAAAACAAAACTCCAATCAATTTTACTTGCGGCACTAAACCTGGCACTAATAACCCGAACGAGATGCGTATGCCGTGACAAGATGTTTTAAGTGGGGAATCAAATTTAGCAATACCAACCATTTGGCACTGGCACTGCAGAATATATACCCCCTCTTCACCACATCACCGTCCCGTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCA-CCCATTGCCAAGCAATGCCAGTTA-CCATGAGGCGTGGCGCCACCTGCGAGATACGGTACCGATTACGCCGAGCCCGGCGCTTAACCATC-GGGCCACGCGCAATCATCGCGGTCACGCCGTACACTTTTCGATGGGAGTGTACGAAAATGAGTCGCCAACGAAAGCTTCCCACTGCTATTCACCGTACGGCCGGATGCGCCCCTACTTTATACCTCACCGAACGCGCACGAAAAGCGAAAGCTCGGGATCCAACGAACCACTCCGAGCTAGCCGGGCAGGACAGTGCAGACAATCATCCGTCGGCGTCCACCAGCCATGCCGGGATCGCAACGACAC-TGATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTGCGGTACAGCCGGAATCCGATCGTTCTGCTGAAAAAGTCCCGCTCGCTGGAGAACGTGCGCGTGGACAACTCGCTCGACGGGTCGCAGGTTTCGCACGAGATGGAGTTCGTATCGAGCCGCATACAGAAGCTTAAGGTACAGGAGTGATGAGGACGGATGGGATAACATGAACTCAGTGATTAGTTTTTTACTTTGCTGATATTTTAACGTTTACGTGAATGGGGGTGAATGGGATTACAGAATTTTTCGGTGTGTTGCGTTACGTAAAGCTCTACTGTAAGCCGTTTTACAACTATGCTATGAATTATACTATGAATACATTTCCATGGAAATAAGAAAAA]
[+] EMBL CNS09ALD [TTGGAAGTTTGTTTACATCTGTGATTCGTTTTTCGGTGAATTGTACCAAAATCTCAAACGGTACAATCATCGCTCGTTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGATGTTCAGTCTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAATGAACTGAAAACAAAACTCCAATCAATTTTACTTGCGGCACTAAACCTGGCACTAATAACCCGAACGAGATGCGTATGCCGTGACAAGATGTTTTAAGTGGGGAATCAAATTTAGCAATACCAACCATTTGGCACTGGCACTGCAGAATATATACCCCCTCTTCACCACATCACCGTCCCGTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCA CCCATTGCCAAGCAATGCCAGTTA CCATGAGGCGTGGCGCCACCTGCGAGATACGGTACCGATTACGCCGAGCCCGGCGCTTAACCATC GGGCCACGCGCAATCATCGCGGTCACGCCGTACACTTTTCGATGGGAGTTTACGAAAATGAGTTGCCAACGAAAGCTTCCCACTGCTATTCACCGTACGGCCGGATGCGCCCCTACTTTATACCTCACCGAACGCGCACGAAAAGCGAAAGCTCGAGATCCAACGAACCACTCCGAGCTAGCCGGGCAGGACAGTTCAGACAATCATCCGTCGGCGTCCACCAGCCATGCCGGGATCGCAACGACAC TTATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTTCGGTACAAAAAGAATCC ]
[+] EMBL CNS09NSZ [ TTGTTTACATCTGTGATTCGTTTTTCGGTGAATTGTACCAAAATCTCAAACGGTACAATCATCGCTCGTTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGATGTTCAGTCTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAATGAACTGAAAACAAAACTCCAATCAATTTTACTTGCGGCACTAAACCTGGCACTAATAACCCGAACGAGATGCGTATGCCGTGACAAGATGTTTTAAGTGGGGAATCAAATTTAGCAATACCAACCATTTGGCACTGGCACTGCAGAA ATATACCCCCTCTTCACCACATCACCGTCCCGTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCA CCCATTGCCAAGCAATGCCAGTTA CCATGAGGCGTGGCGCCACCTGCGAGATACGGTACCGATTACGCCGAGCCCGGCGCTTAACCATCGGGGCCACGCGCAATCATCGCGGTCACGCGGTACACTTTTCGATGGGAGTGTACGAAAATGAGTCGCCAACGAAAGCTTCCCACTGCTATTCACCGTACGGCCGGATGCGCCCCTACTTTATACCTCACCGAACGCGCACGAAAAGCGAAA CTCGGGATCCAACGAACCACTCCGAGCTAGCCGGGCAGGACAGTGCAGACAATCATCCGTCGGCGTCCACCAGCCATGCCGGGATCGCAACGACAC TGATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTGCGGTACAGCCGGAATCCGATCGTTCTGCT ]
[-] EMBL CNS09NT0 [ CCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCACCCCATTGCCAAGCAATGCCAGTTACCCATGAGGCGTGGCGCCACCTGCGAGATACGGTACCGATTACGCCGAGCCCGGCGCTTAACCATC GGGCCACGCGCAATCATCGCGGTCACGCCGTACACTTTTCGATGGGAGTGTACGAAAATGAGTCGCCAACGAAAGCTTCCCACTGCTATTCACCGTACGGCCGGATGCGCCCCTACTTTATACCTCACCGAACGCGCACGAAAAGCGAAAGCTC GGATCCAACGAACCACTCCGAGCTAGCCGGGCAGGACAGTGCAGACAATCATCCGTCGGCGTCCACCAGCCATGCCGGGATCGCAACGACAC TGATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTGCGGTACAGCCGGAATCCGATCGTTCTGCTGAAAAAGTCCCGCTCGCTGGAGAACGTGCGCGTGGACAACTCGCTCGACGGGTCGCAGGTTTCGCACGAGATGGAGTTCGTATCGAGCCGCATACAGAAGCTTAAGGTACAGGAGTGATGAGGACGGATGGGATAACATGAACTCAGTGATTAGTTTTTTACTTTGCTGATATTTTAACGTTTACGTGAATGGGGGTGAATGGGATTACAGAATTTTTCGGTGTGTTGCGTTACGTAAAGCTCTACTGTAAGCCGTTTTACAACTATGCTATGAATTATACTATGAATACATTTCCATGGAAATAAGA ]
[-] EMBL CNS09ALE [ CCATGCCGGGATCGAAACGAAACATGATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTGCGGTACAGCCGGAATCCGATCGTTCTGCTGAAAAAGTCCCGCTCGCTGGAGAACGTGCGCGTGGACAACTCGCTCGACGGGTCGCAGGTGTCGCACGAGATGGAGTTCGTATCGAGCCGCATACAGAAGCTTAAGGTACAGGAGTGATGAGGACGGATGGGATAACATGAACTCAGTGATTAGTTTTTTACTTTGCTGATATTTTAACGTTTACGTGAATGGGGGTGAATGGGATTACAGAATTTTTCGGTGTGTTGCGTTACGTAAAGCTCTACTGTAAGCCGTTTTACAACTATGCTATGAATTATACTATGAATACATTTCCAT GAATTAAGAAAAA]
consensusID : consensus_6007#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[AGAATCGCCCGAGGTGAATGTACCAAAATCTCAAACGGTACAATCATCGCTCGTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGATGTTCAGTTTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAATGAACTGAAAACAAAACTCCAATCAATTATACTTGCGGCACTAAACCTGGCACTAATAACCCGAAAGAGATGCGTATGCCGTGACAAGATGTTTTAAGCGTGGAATCAAATTTAGCAATACCAACCATTTGGCACTGGCACTGCAGAAATATACCCCCTCTTCACCACATCACCGTCCCGTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCACCCATTGCCAAGCAATGCCAGTTACCATGAGGCGTGGC]
[+] EMBL AL930300 [AGAATCGCCCGAGGTGAATGTACCAAAATCTCAAACGGTACAATCATCGCTCGTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGATGTTCAGTTTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAATGAACTGAAAACAAAACTCCAATCAATTATACTTGCGGCACTAAACCTGGCACTAATAACCCGAAAGAGATGCGTATGCCGTGACAAGATGTTTTAAGCGTGGAATCAAATTTAGCAATACCAACCATTTGGCACTGGCACTGCAGAAATATACCCCCTCTTCACCACATCACCGTCCCGTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCGAACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGCGCGGGCAGCCCTTTACCTTTCACCCATTGCCAAGCAATGCCAGTTACCATGAGGCGTGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6007#0 TTGGAAGTTTGTTTACATCTGTGATTCGTTTTTCGGTGAATTGTACCAAAATCTCAAACG 60
consensus_6007#1 ---------------------AGAATCGCCCGA-GGTGAAT-GTACCAAAATCTCAAACG 37
** *** ******* ******************
consensus_6007#0 GTACAATCATCGCTCGTTAAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGA 120
consensus_6007#1 GTACAATCATCGCTCGT-AAAACTGATTACTAATAAAATCGCGCATTGGATTGCCTAGGA 96
***************** ******************************************
consensus_6007#0 TGTTCAGTCTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAA 180
consensus_6007#1 TGTTCAGTTTCCCAATCGCATCCGGTACGTTGCCCTTCAGGACGAGCAACGATTCAGCAA 156
******** ***************************************************
consensus_6007#0 TGAACTGAAAACAAAACTCCAATCAATTTTACTTGCGGCACTAAACCTGGCACTAATAAC 240
consensus_6007#1 TGAACTGAAAACAAAACTCCAATCAATTATACTTGCGGCACTAAACCTGGCACTAATAAC 216
**************************** *******************************
consensus_6007#0 CCGAACGAGATGCGTATGCCGTGACAAGATGTTTTAAGTGGGGAATCAAATTTAGCAATA 300
consensus_6007#1 CCGAAAGAGATGCGTATGCCGTGACAAGATGTTTTAAGCGTGGAATCAAATTTAGCAATA 276
***** ******************************** * *******************
consensus_6007#0 CCAACCATTTGGCACTGGCACTGCAGAATATATACCCCCTCTTCACCACATCACCGTCCC 360
consensus_6007#1 CCAACCATTTGGCACTGGCACTGCAGAA-ATATACCCCCTCTTCACCACATCACCGTCCC 335
**************************** *******************************
consensus_6007#0 GTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCG 420
consensus_6007#1 GTTGTTAAGACCTAACAATGCAAACCCCAACCGCCGAAAGCAGCGTGCCGGCTGCGGCCG 395
************************************************************
consensus_6007#0 AACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGC 480
consensus_6007#1 AACTGAACCCGATGTGCCAAACGAAGCAGGAAGTGGACCCTACCAAAGACACCGAACGGC 455
************************************************************
consensus_6007#0 GCGGGCAGCCCTTTACCTTTCACCCATTGCCAAGCAATGCCAGTTACCATGAGGCGTGGC 540
consensus_6007#1 GCGGGCAGCCCTTTACCTTTCACCCATTGCCAAGCAATGCCAGTTACCATGAGGCGTGGC 515
************************************************************
consensus_6007#0 GCCACCTGCGAGATACGGTACCGATTACGCCGAGCCCGGCGCTTAACCATCGGGCCACGC 600
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 GCAATCATCGCGGTCACGCCGTACACTTTTCGATGGGAGTGTACGAAAATGAGTCGCCAA 660
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 CGAAAGCTTCCCACTGCTATTCACCGTACGGCCGGATGCGCCCCTACTTTATACCTCACC 720
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 GAACGCGCACGAAAAGCGAAAGCTCGGGATCCAACGAACCACTCCGAGCTAGCCGGGCAG 780
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 GACAGTGCAGACAATCATCCGTCGGCGTCCACCAGCCATGCCGGGATCGCAACGACACTG 840
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 ATGGAAACGTGCGAACACTCCACGCCGATGATGGATGACGTATCGATCAATGCAGTGCGG 900
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 TACAGCCGGAATCCGATCGTTCTGCTGAAAAAGTCCCGCTCGCTGGAGAACGTGCGCGTG 960
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 GACAACTCGCTCGACGGGTCGCAGGTTTCGCACGAGATGGAGTTCGTATCGAGCCGCATA 1020
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 CAGAAGCTTAAGGTACAGGAGTGATGAGGACGGATGGGATAACATGAACTCAGTGATTAG 1080
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 TTTTTTACTTTGCTGATATTTTAACGTTTACGTGAATGGGGGTGAATGGGATTACAGAAT 1140
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 TTTTCGGTGTGTTGCGTTACGTAAAGCTCTACTGTAAGCCGTTTTACAACTATGCTATGA 1200
consensus_6007#1 ------------------------------------------------------------
consensus_6007#0 ATTATACTATGAATACATTTCCATGGAAATAAGAAAAA 1238
consensus_6007#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||