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Anopheles gambiae
cluster # 6101 cluster # 6101       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6101#0 length = 1007 sequences # 5  

consensusID : consensus_6101#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1007
fasta sequence
                              [GGTTTACATGGGAATTCGCGATACTACAACTTTACCGTCACTGAAAATGGTAAAGTGGCCACTTATACCAATGAATATTTTACTGATTACTTGGGATACTAAAACGGTAAACTTCCTGAAGAACTTAAGAGCAGATCGGCATTTTTTTGCGATGGTAACACCTCCTGCTCCACATGCCCCATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCCGAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTCCACATTGCCATTAAAGTTCCTGGATGAGATGGACACGATTCACCGTAAGAGATGGCAAACACTGATGGCAGTTGATAATATGGTGGAGAACATTGTGAACATTTTACGTGAAAAGAAATTATTGGAAAAAACATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTCCCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAGAGGACCTACAATCAAACCGAAAGCAGTCCAAGAGTCAGCCGTTGCATTGCTAGACATCGTGCCCACGATCCTGCAGCTTGCCAATCTAGACCTGCCTTCCTTCTTAGATGGCCAACCATTGCCACTGCACAGT-GATGCAGATGTGTTAATTGAAAGACAACTACTGGTAGAATACTGGGGGAGAAGGAT-CCTTGGAAACGTATAACCCCGAATGCCCATGGGCAGCGCAAGACAGACTACAGTTGTGTACTGTTGACGCTGCGTGCCATTGCCAAGACGCCTGGAATAATACTTACAATTGCGTTCGTCATCTGGCTACTGATTTGAATTTCATTTACTGCGAATTCAAGGATAATCAGAATTTCGTTGAAGCTTATGATATTGCCAATGACCTGTATCAAATGAAGAACATCGGCTTCGAAATACTTCCCTCTATTAGAGCAAAGTACAGCTTAGCAATACAGAAT]

[+] EMBL CNS09P3J             [GGTTTACATGGGAATTCGCGATACTACAACTTTACCGTCACTGAAAATGGTAAAGTGGCCACTTATACCAATGAATATTTTACTGATTACTTGGGATACTAAAACGGTAAACTTCCTGAAGAACTTAAGAGCAGATCGGCATTTTTTTGCGATGGTAACACCTCCTGCTCCACATGCCCCATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCCGAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTCCACATTGCCATTAAAGTTCCTGGATGAGATGGACACGATTCACCGTAAGAGATGGCAAACACTGATGGCAGTTGATAATATGGTGGAGAACATTGTGAACATTTTACGTGAAAAGAAATTATTGGAAAAAACATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTCCCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAGAGGACCTACAATCAAACCGAAAGCAGTCCAAGAGTCAGCCGTTGCATTGCTAGACATCGTGCCCACGATCCTGCAGCTTGCCAATCTAGACCTGCCTTCCTTCTTAGATGGCCAACCATTGCCACTGCACAGT GATGCAGATGTGTTAATTGAAAGACAACTACTGGTAGAATACTGGGGGAGAAGGAT CCTTGGAAACGTATAACCCCGAATGCCCATGGGCAGCGCAAGACAGACTACAGTTGTGTACTGTTGACGCTGCGTGCCATTGCCAAGACGCCTGGAATAATACTTACAATTGCGTTCGTCATCTGGCTACTGATTTGAATTTCATTTACTGCGAATTCAAGGATAATCAGAATTTCGTTGAAGCTTATGATATTGCCAATGACCTGTATCAAATGAAGAACA                                                        ]
[+] EMBL BM590223             [                                                                                        ccggaGGATACTAAAACGGTAAACTTCCTGAAGAACTTAAGAGCAGATCGGCATTTTTTTGCGATGGTAACACCTCCTGCTCCACATGCCCCATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCCGAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTCCACATTGCCATTAAAGTTCCTGGATGAGATGGACACGATTCACCGTAAGAGATGGCAAACACTGATGGCAGTTGATAATATGGTGGAGAACATTGTGAACATTTTACGTGAAAAGAAATTATTGGAAAAAACATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTCCCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAGAGGACCTACAATCAAACCGAAAGCAGTCCAAGAGTCAGCCGTTGCATTGCTAGACATCGTGCCCACGATCCTGCAGCTTGCCAATCTAGAACTGCCTTCCTTCTTAGATGGCCAACCATTGCCACTGCACAGTGGATGCAGATGTGTTAATTGAAAGACAACTACTGGTAGAATACTGGGGGAGAAGGATCCCTTGGAAACGTATAACCCCG                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09ELI             [                                                                                                               CTTCCTGAAGAACTTAAGAGCAGATCGGCATTTTTGTGCGATGGTAACACCTCCTGCTCCACATGCCCCATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCCGAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTCCACATTGCCATTAAAGTTCCTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09P3K             [                                                                                                                      AAGGACTTAAGAGCAGATCGGCATTTTTTTGCGATGGTAACACCTCCTGCTCCACATGCCCCATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCCGAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTCCACATTGCCATTAAAGTTCCTGGATGAGATGGACACGATTCACCGTAAGAGATGGCAAACACTGATGGCAGTTGATAATATGGTGGAGAACATTGTGAACATTTTACGTGAAAAGAAATTATTGGAAAAAACATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTCCCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAGAGGACCTACAATCAAACCGAAAGCAGTCCAAGAGTCAGCCGTTGCATTGCTAGACATCGTGCCCACGATCCTGCAGCTTGCCAATCTAGACCTGCCTTCCTTCTTAGATGGCCAACCATTGCCACTGCACAGT GATGCAGATGTGTTAATTGAAAGACAACTACTGGTAGAATACT GGGGAGAAGGAT CCTTGGAAACGTATAACCCCGAATGCCCATGGGCAGCGCAAGACAGACTACAGTTGTGTACTGTTGACGCTGCGTGCCATTGCCAAGACGCCTGGAATAATACTTACAATTGCGTTCGTCATCTGGCTACTGATTTGAATTTCATTTACTGCGAATTCAAGGATAATCAGAATTTCGTTGAAGCTTATGATATTGCCAATGACCTGTATCAAATGAAGAACATCGGCTTCGAAATACTTCCCTCTATTAGAGCAAAGTACAGCTTAGCAATACAGAAT]
[-] EMBL CNS09ELJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTCCCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAGAGGACCTACAATCAAACCGAAAGCAGTCCAAGAATCAGCCGTTGCATTGCTAGACATCGTGCCCACGATCCTGCAGCTTGCCAATCTAGACCTGCCTTCCTTCTTAGATGGCCAACCATTGCCACTGCACAGT GAT                                                                                                                                                                                                                                                                                                                                            ]


>consensus_6101#0 GGTTTACATGGGAATTCGCGATACTACAACTTTACCGTCACTGAAAATGGTAAAGTGGCC ACTTATACCAATGAATATTTTACTGATTACTTGGGATACTAAAACGGTAAACTTCCTGAA GAACTTAAGAGCAGATCGGCATTTTTTTGCGATGGTAACACCTCCTGCTCCACATGCCCC ATTCACACCTGCAGACAGGCACAAAGATCTTTTCCCCAATGTCAAAGCAATACAAACGCC GAATTTCAACATATCTTCCAGTCCATTACAAAAACATTGGCTATTAACTATGGAACCTTC CACATTGCCATTAAAGTTCCTGGATGAGATGGACACGATTCACCGTAAGAGATGGCAAAC ACTGATGGCAGTTGATAATATGGTGGAGAACATTGTGAACATTTTACGTGAAAAGAAATT ATTGGAAAAAACATTTATATTTTACACCTCCGACAATGGTTTTCATTTAGGGCAATTCTC CCAAGCCTATGATAAACGGCAACCCTATGAGACGGATATTAGGGTACCTTTATTCGTAAG AGGACCTACAATCAAACCGAAAGCAGTCCAAGAGTCAGCCGTTGCATTGCTAGACATCGT GCCCACGATCCTGCAGCTTGCCAATCTAGACCTGCCTTCCTTCTTAGATGGCCAACCATT GCCACTGCACAGTGATGCAGATGTGTTAATTGAAAGACAACTACTGGTAGAATACTGGGG GAGAAGGATCCTTGGAAACGTATAACCCCGAATGCCCATGGGCAGCGCAAGACAGACTAC AGTTGTGTACTGTTGACGCTGCGTGCCATTGCCAAGACGCCTGGAATAATACTTACAATT GCGTTCGTCATCTGGCTACTGATTTGAATTTCATTTACTGCGAATTCAAGGATAATCAGA ATTTCGTTGAAGCTTATGATATTGCCAATGACCTGTATCAAATGAAGAACATCGGCTTCG AAATACTTCCCTCTATTAGAGCAAAGTACAGCTTAGCAATACAGAAT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)