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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6259#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 865 fasta sequence
[AATGCGGAGGGGTGCAAATGTGGCTCGTAACACGATTGTTTCTTATGCTGAGTGCCATCGTGGTGCCGCATGTTTTGGCACAGTGTGACAGCAGTTCGCCGTACCGCACGTTCGACAGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGCCGAATACGGTGATGGTGTGTACGTTCCACGTCGTTCAAAAACTGGAGCCCAACTACCGAGTGCTCGATTTTTTTTTTATTGGATGTTCAACGACCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCGGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGTGCTGCGCCAACCGTCAACAGGCACAGCAGTTGAATGCGGCCACCTCATTTCTGGACCTGTCCGTTGTGTACGGTAACAGTGGACAGCAGAATGCGCACTGCGTGCGTTTGTTGGCGGCCGGATGAAGGTGGACAATCGGAACGGTACCGATTGGCCTCCACGACATCCGCAAGCCACTAGTGCCTGTACGTTGAACGCTGCCACCGACACCTGCTATTTGACCGGAGACGAGCGGAGAACATTACGCCAGAATTAACGATCCTGCACGTGGCGTTCTTGCGCGAGCACAAATCGCCTCGCACAGCAGCTGAGCATAGTGCATCCACTGTGGAAC]
[+] EMBL CNS094ZI [AATGCGGAGGGGTGCAAATGTGGCTCGTAACACGATTGTTTCTTATGCTGAGTGCCATCGTGGTGCCGCATGTTTTGGCACAGTGTGACAGCAGTTCGCCGTACCGCACGTTCGACAGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGCCGAATACGGTGATGGTGTGTACGTTCCACGTCGTTCAAAAACTGGAGCCCAACTACCGAGTGCTCGATTTTTTTTTTATTGGATGTTCAACGACCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCGGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGTGCTGCGCCAACCGTCAACAGGCACAGCAGTTGAATGCGGCCACCTCATTTCTGGACCTGTCCGTTGTGTACGGTAACAGTGGACAGCAGAATGCGCACTGCGTGCGTTTGTTGGCGGCCGGATGAAGGTGGACAATCGGAACGGTACCGATTGGCCTCCACGACATCCGCAAGCCACTAGTGCCTGTACGTTGAACGCTGCCACCGACACCTGCTATTTGACCGGAGACGAGCGGAGAACATTACGCCAGAATTAACGATCCTGCACGTGGCGTTCTTGCGCGAGCACAAATCGCCTCGCACAGCAGCTGAGCATAGTGCATCCACTGTGGAAC]
consensusID : consensus_6259#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 682 fasta sequence
[CCGCGCTACAAAATGTGGCTCGTAACGCGATTGTTTCTTATGCTGAGTGCCATCGTGGTGCCGCATGTTTTGGCACAGTGTGATAGCAGTTCGCCGTACCGCACGTTCGACGGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGCCGAATACGGCGATGGTGTATACGTTCCACGTCGTTCAAAAACTGGAGCCCAACTACCGAGTGCTCGACTGCTGTCGATGACGATGTTCAACGAGCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGCCAACCGTCAACAGGCGCAGCAATTTAATGCGGCCACCTCGTTTCTGGACCTGTCCGTTGTGTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTTGTTGGCGGCCGGATGAAGGTGGACAATCGGAACGGTACCGATTGGC]
[+] EMBL BM581162 [CCGCGCTACAAAATGTGGCTCGTAACGCGATTGTTTCTTATGCTGAGTGCCATCGTGGTGCCGCATGTTTTGGCACAGTGTGATAGCAGTTCGCCGTACCGCACGTTCGACGGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGCCGAATACGGCGATGGTGTATACGTTCCACGTCGTTCAAAAACTGGAGCCCAACTACCGAGTGCTCGACTGCTGTCGATGACGATGTTCAACGAGCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGCCAACCGTCAACAGGCGCAGCAATTTAATGCGGCCACCTCGTTTCTGGACCTGTCCGTTGTGTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTTGTTGGCGGCCGGATGAAGGTGGACAATCGGAACGGTACCGATTGGC]
[+] EMBL BM609638 [ ccgACAAAATGTGGCTCGTAACGCGATTGTTTCTTGTGCTGAGTGCCATCGTGGTGCCGCATGTTTTGGCACAGTGTGACAGCAGTTCGCCGTACCGTACGTTTGACGGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGCCGAATACGGCGATGGTGTGTACGTTCCACGTCGTTCAAAAACTGGAGCCCAACTACCGAGTGCTCGACTGCTGTCGATGACGATGTTTAACGACCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTCGGACAGCTTGTCGCTCACGACATGGGTCTACGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCGGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGAACTAGTACGCACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGCCAACCGTCAACAGGCGCAGCAATTGAATGCGGCCACCTCGTTTCTGGA ]
[+] EMBL BX625930 [ CATCGTGGTGCCGCATGTTTTGGCACAGTGTGATAGCAGTTCGCCGTACCGCACGTTCGACGGTACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTACTCCCGGNCGAATACNGCGA ]
consensusID : consensus_6259#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 551 fasta sequence
[ATTGCCCCAGGCTTAATGCTCGACTGCTGTCGATGACGATGTTCAACGAGTCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGCCAACCGTCAACAGGCGCAGCAATTTAATGCGGCACCTCGTTTCTGGACCTGTCCGTTGTGTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTAGNTGGCCGGCCGGATGAAGGTGGACAATCGGAACGTTACCGNATTGGCGCTCCACGACATCCGCAAGCCACTANTGGCTGGTACGTTGAACGCTGGCAACGACACACTGGCTATNTTGACCGGAGACGAGCGGAGCAACACT]
[+] EMBL AL694218 [ATTGCCCCAGGCTTAATGCTCGACTGCTGTCGATGACGATGTTCAACGAGTCAAAACATACTCGATCCACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCGAGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGGTCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCGGTCCTATCCGCCGGTGGGATTCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGCCAACCGTCAACAGGCGCAGCAATTTAATGCGGCACCTCGTTTCTGGACCTGTCCGTTGTGTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTAGNTGGCCGGCCGGATGAAGGTGGACAATCGGAACGTTACCGNATTGGCGCTCCACGACATCCGCAAGCCACTANTGGCTGGTACGTTGAACGCTGGCAACGACACACTGGCTATNTTGACCGGAGACGAGCGGAGCAACACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6259#0 AATGCGGAGGGGTGCAAA-TGTGGCTCGTAACACGATTGTTTCTTATGCTGAGTGCCATC 59
consensus_6259#1 ------CCGCGCTACAAAATGTGGCTCGTAACGCGATTGTTTCTTATGCTGAGTGCCATC 54
consensus_6259#2 ------------------------------------------------------------
consensus_6259#0 GTGGTGCCGCATGTTTTGGCACAGTGTGACAGCAGTTCGCCGTACCGCACGTTCGACAGT 119
consensus_6259#1 GTGGTGCCGCATGTTTTGGCACAGTGTGATAGCAGTTCGCCGTACCGCACGTTCGACGGT 114
consensus_6259#2 ------------------------------------------------------------
consensus_6259#0 ACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTA 179
consensus_6259#1 ACCTGTAACAACCTGCAAAATCCATCCTGGGGATCAGCCAACACACCGTACGGAAGATTA 174
consensus_6259#2 ------------------------------------------------------------
consensus_6259#0 CTCCCGGCCGAATACGGTGATGGTGTGTACGTTCCACGTCGTTCAAAAACTGGAGCCCAA 239
consensus_6259#1 CTCCCGGCCGAATACGGCGATGGTGTATACGTTCCACGTCGTTCAAAAACTGGAGCCCAA 234
consensus_6259#2 ---------------------------------------------------ATTGCCCCA 9
**** *
consensus_6259#0 CTACCGAGTGCTCGATTTTTTTTTTATTGGATGTTCAACGAC-CAAAACATACTCGATCC 298
consensus_6259#1 CTACCGAGTGCTCGACTGCTGTCGATGACGATGTTCAACGAG-CAAAACATACTCGATCC 293
consensus_6259#2 G-GCTTAATGCTCGACTGCTGTCGATGACGATGTTCAACGAGTCAAAACATACTCGATCC 68
* * ******* * * * ************ *****************
consensus_6259#0 ACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCG 358
consensus_6259#1 ACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCG 353
consensus_6259#2 ACGAACCACCCTAGTGAACATGCAGTTTGGACAGCTTGTCGCTCACGACATGGGTCTTCG 128
************************************************************
consensus_6259#0 AGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCGGG 418
consensus_6259#1 AGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGG 413
consensus_6259#2 AGCAGGCAGTTCCGATCAGGTAGCGTGTTGCCAGAATGGAAGAGTCGTCGCCAATCCAGG 188
********************************************************* **
consensus_6259#0 TCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGAT 478
consensus_6259#1 TCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACCCGGTCCTATCCGCCGGTGGGAT 473
consensus_6259#2 TCGTCGATGCTTTGCAATTCCGGTCCGTCCAGACGACC-GGTCCTATCCGCCGGTGGGAT 247
************************************** *********************
consensus_6259#0 TCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGTGCTGCGC 538
consensus_6259#1 TCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGC 533
consensus_6259#2 TCAATGTCTGGATCTAGTACGTACACTCAACACCTGTGACGTTAACCCATCGAGCTGCGC 307
**************************************************** *******
consensus_6259#0 CAACCGTCAACAGGCACAGCAGTTGAATGCGGCCACCTCATTTCTGGACCTGTCCGTTGT 598
consensus_6259#1 CAACCGTCAACAGGCGCAGCAATTTAATGCGGCCACCTCGTTTCTGGACCTGTCCGTTGT 593
consensus_6259#2 CAACCGTCAACAGGCGCAGCAATTTAATGCGGC-ACCTCGTTTCTGGACCTGTCCGTTGT 366
*************** ***** ** ******** ***** ********************
consensus_6259#0 GTACGGTAACAGTGGACAGCAGAATGCGCA-CTGCGTGCGTTTGTTGGC-GGCCGGATGA 656
consensus_6259#1 GTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTTGTTGGC-GGCCGGATGA 652
consensus_6259#2 GTATGGTAACAGTGGACAGCAGAATGCGCAGCTGCGTGCGTTAGNTGGCCGGCCGGATGA 426
*** ************************** *********** * **** **********
consensus_6259#0 AGGTGGACAATCGGAACGGTACCGA-TTGGCCTCCACGACATCCGCAAGCCACTAGTGCC 715
consensus_6259#1 AGGTGGACAATCGGAACGGTACCGA-TTGGC----------------------------- 682
consensus_6259#2 AGGTGGACAATCGGAACGTTACCGNATTGGCGCTCCACGACATCCGCAAGCCACTANTGG 486
****************** ***** *****
consensus_6259#0 TGTACGTTGAACGCTGCCACCGACACCTGCTATTTGACCGGAGACGAGCGGAGAACATTA 775
consensus_6259#1 ------------------------------------------------------------
consensus_6259#2 CTGGTACGTTGAACGCTGGCAACGACACACTGGCTATNTTGACCGGAGACGAGCGGAGCA 546
consensus_6259#0 CGCCAGAATTAACGATCCTGCACGTGGCGTTCTTGCGCGAGCACAAATCGCCTCGCACAG 835
consensus_6259#1 ------------------------------------------------------------
consensus_6259#2 ACACT------------------------------------------------------- 551
consensus_6259#0 CAGCTGAGCATAGTGCATCCACTGTGGAAC 865
consensus_6259#1 ------------------------------
consensus_6259#2 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||