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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6272#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1095 fasta sequence
[CCGAAAGTTTGTAGTGGGATTGTGCTCGGTGTGAAAACATGCGATTTCTTCACGTATCGCTTTTGGGAAGATGGTCAAAAGGGCGAAGGCACTTGTGTTCCGCGGTCGGACAGTTGACGCCATGCCGCGAGTTGACGCCGGAGATGAAACATCAGCTGGAGCGGAAGTGGCAGAACAAGCTGGGCGACTGCCGGTTCGACCCTGCCGACACGGTTAAACCGAAACGCTACGTGCTGGCCATGTTTCCGTATCCCTCCGGCAGCCTGCACATGGGCCACGTGCGGGTGTACACGATCAGCGATGCGATGGCCCGGTTTTACCGGCTGAACGGTGCGAACGTGCTGCACCCGATGGGTTGGGATGCGTTCGGGCTGCCGGCGGAGAATGCTGCCATGCAGCGGCGCATTCCGGCCGACACGTGGACGCACCGGAACATTGGTGAGATGCGTAAGCAGCTGGAGCAGCTTGCGTTCAGCTTCGACTGGGAGCGAGAGTTTGCTACCTGCCAGCCGGAGTACTACCGCTGGACGCAGCAGCTGTTTCTGATGCTGTACAGGGATGGGCTGGCGTACCAGCGGGAAGCACTCGTCAACTGGGACCCGGTCGATGAGACCGTGCTGGCCGACGAGCAGGTGGACGATAACGGTTGCTCCTGGCGGTCGGGCGCGAAGGTGGAGAAAAAGGTGCTGCGCCAATGGTTCGTGAAGACGACCCGGTTCGCCAAACCGCTGCTGGAGGGTTTAAGCGATCCGGGGCTGGAAGATTGGAAGGATATCATAAAGCTGCAGCGGCACTGGATCGGCGAGTGCGAGGGATATGCGTTCGAGCTGCCGCTGGTTGGAGAGCACAAGATGAAGAGCATTGCCGTGTGGACTAGCGATCCGGTCGAGCTGGAACGGGCCCTATTTATTGCTATTCATCAGACGAATCTACTGAACACGGCTAAACAAACCGATTGCCTGCTGGAGAACGTTACCGTACAGAATCCGTTCACCGGGGATGTGCTGCCAGTGATCGTAACGGAAGCGGTCGCCTTTCCGGAGGGTTGCGACACCTACCTGGCGGTCGGGAGCGAATCGAATCGGCAGTTAGCGA]
[+] EMBL BM651464 [CCGAAAGTTTGTAGTGGGATTGTGCTCGGTGTGAAAACATGCGATTTCTTCACGTATCGCTTTTGGGAAGATGGTCAAAAGGGCGAAGGCACTTGTGTTCCGCGGTCGGACAGTTGACGCCATGCCGCGAGTTGACGCCGGAGATGAAACATCAGCTGGAGCGGAAGTGGCAGAACAAGCTGGGCGACTGCCGGTTCGACCCTGCCGACACGGTTAAACCGAAACGCTACGTGCTGGCCATGTTTCCGTATCCCTCCGGCAGCCTGCACATGGGCCACGTGCGGGTGTACACGATCAGCGATGCGATGGCCCGGTTTTACCGGCTGAACGGTGCGAACGTGCTGCACCCGATGGGTTGGGATGCGTTCGGGCTGCCGGCGGAGAATGCTGCCATGCAGCGGCGCATTCCGGCCGACACGTGGACGCACCGGAACATTGGTGAGATGCGTAAGCAGCTGGAGCAGCTTGCGTTCAGCTTCGACTGGGAGCGAGAGTTTGCTACCTGCCAGCCGGAGTACTACCGCTGGACGCAGCAGCTGTTTCTGATGCTGTACAGGGATGGGCTGGCGTACCAGCGGGAAGCACTCGTCAACTGGGACCCGGTCGATGAGACCGTGCTGGCCGACGAGCAGGTGGACGATAACGGTTGCTCCTGGCGGTCGGGg ]
[+] EMBL BM631127 [ ccGCTTCGACTGGGAGCGAGAGTTTGCTACCTGCCAGCCGGAGTACTACCGCTGGACGCAGCAGCTGTTTCTGATGCTGTACAGGGATGGGCTGGCGTACCAGCGGGAAGCACTCGTCAACTGGGACCCGGTCGATGAGACCGTGCTGGCCGACGAGCAGGTGGACGATAACGGTTGCTCCTGGCGGTCGGGCGCGAAGGTGGAGAAAAAGGTGCTGCGCCAATGGTTCGTGAAGACGACCCGGTTCGCCAAACCGCTGCTGGAGGGTTTAAGCGATCCGGGGCTGGAAGATTGGAAGGATATCATAAAGCTGCAGCGGCACTGGATCGGCGAGTGCGAGGGATATGCGTTCGAGCTGCCGCTGGTTGGAGAGCACAAGATGAAGAGCATTGCCGTGTGGACTAGCGATCCGGTCGAGCTGGAACGGGCCCTATTTATTGCTATTCATCAGACGAATCTACTGAACACGGCTAAACAAACCGATTGCCTGCTGGAGAACGTTACCGTACAGAATCCGTTCACCGGGGATGTGCTGCCAGTGATCGTAACGGAAGCGGTCGCCTTTCCGGAGGGTTGCGACACCTACCTGGCGGTCGGGAGCGAATCGAATCGGCAGTTAGCGA]
[+] EMBL BM604440 [ ccgGCTACCTGCCAGCCGGAGTACTACCGCTGGACGCAGCAGCTGTTTCTGATGCTGTACAGGGATGGGCTGGCGTACCAGCGGGAAGCACTCGTCAACTGGGACCCGGTCGATGAGACCGTGCTGGCCGACGAGCAGGTGGACGATAACGGTTGCTCCTGGCGGTCGGGCGCGAAGGTGGAGAAAAAGGTGCTGCGCCAATGGTTCGTGAAGACGACCCGGTTCGCCAAACCGCTGCTGGAGGGTTTAAGCGATCCGGGGCTGGAAGATTGGAAGGATATCATAAAGCTGCAGCGGCACTGGATCGGCGAGTGCGAGGGATATGCGTTCGAGCTGCCGCTGGTTGGAGAGCACAAGATGAAGAGCATTGCCGTGTGGACTAGCGATCCGGTCGAGCTGGAACGGGCCCTATTTATTGCTATTCATCAGACGAATCTACTGAACACGGCTAAACAAACCGATTGCCTGCTGGAGAACGTTACCGTACAGAATCCGTTCACCGGGGATGTGCTGCCAGTGATCGTAACGGAAGCGGTCGCCTTTCCGGAGGGTTGCGACACCTACCTGGCGGTCG ]
consensusID : consensus_6272#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 701 fasta sequence
[ATGCGATTTCTTCACGTATCGCTTTTGGAAAGATGGTCAAAAGGGCGAGGCACTTGTGTTCCGCGGTCGGACAGTTGACGACATGCCGCGAGTTGGCACCGGAACTGGTCCGAAGCGACATTCCCGGGCATTCTGAACTGGCAGAAACGGCTCTGGCTGACGATGTACGATTTCCGGGAGGCGAGGGCAAACATCGATCCCAGCTCAGGCGCACCAACACCAACGCCCGAGTTTACCGAGCACGAGCACAAGCTGTGGGACGCACGGAACTATTTCACCGCCGGTGCAACTTCAACTACCGCCACTCGCACCAGCTGAGCGTGGGCATCTCGAAGATGCAGGGCCTGACGAACGCGATCCGGCGTGCCCCGCCGGCCGTGGTGAGCTACGGCCGACAGTACGAACGGGCACTGGCCGCCCAGATCATTATGCTTGCCCCGATGGCACCCCACTTTGCGGCGGAACTGTGGGAGCAGCTTGCGACGGCACCGCACCGTGTGGATGACGACGCGGCCGGCCTGCGCTGGGACGGTACGGTGTTTGAGCAACGGTGGCCCGAAATCGACGAAGAGTTTCCGCTCGATCTTACCTTTAAGATCAACGGTGCGGAGTGTTGCATACTTAAAATCCCGGCCAAGCGCTTCAACCAGCTGACGCATCAGGAATCGCTCGATCTGGCACTGCGGCAGGAGCCGATCGTG]
[+] EMBL CNS093Z2 [ATGCGATTTCTTCACGTATCGCTTTTGGAAAGATGGTCAAAAGGGCGAGGCACTTGTGTTCCGCGGTCGGACAGTTGACGACATGCCGCGAGTTGGCACCGGAACTGGTCCGAAGCGACATTCCCGGGCATTCTGAACTGGCAGAAACGGCTCTGGCTGACGATGTACGATTTCCGGGAGGCGAGGGCAAACATCGATCCCAGCTCAGGCGCACCAACACCAACGCCCGAGTTTACCGAGCACGAGCACAAGCTGTGGGACGCACGGAACTATTTCACCGCCGGTGCAACTTCAACTACCGCCACTCGCACCAGCTGAGCGTGGGCATCTCGAAGATGCAGGGCCTGACGAACGCGATCCGGCGTGCCCCGCCGGCCGTGGTGAGCTACGGCCGACAGTACGAACGGGCACTGGCCGCCCAGATCATTATGCTTGCCCCGATGGCACCCCACTTTGCGGCGGAACTGTGGGAGCAGCTTGCGACGGCACCGCACCGTGTGGATGACGACGCGGCCGGCCTGCGCTGGGACGGTACGGTGTTTGAGCAACGGTGGCCCGAAATCGACGAAGAGTTTCCGCTCGATCTTACCTTTAAGATCAACGGTGCGGAGTGTTGCATACTTAAAATCCCGGCCAAGCGCTTCAACCAGCTGACGCATCAGGAATCGCTCG ]
[+] EMBL BX622713 [ CTTACCTTTAAGATCAACGGTGCGGAGTGTTGCATACTTAAAATCCCGGCCAAGCGCTTCAACCAGCTGACGCATCAGGAATCGCTCGATCTGGCACTGCGGCAGGAGCCGATCGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6272#0 CCGAAAGTTTGTAGTGGGATTGTGCTCGGTGTGAAAACATGCGATTTCTTCACGTATCGC 60
consensus_6272#1 --------------------------------------ATGCGATTTCTTCACGTATCGC 22
**********************
consensus_6272#0 TTTTGGGAAGATGGTCAAAAGGGCGAAGGCACTTGTGTTCCGCGGTCGGACAGTTGACGC 120
consensus_6272#1 TTTTGGAAAGATGGTCAAAAGGGCGA-GGCACTTGTGTTCCGCGGTCGGACAGTTGACGA 81
****** ******************* ********************************
consensus_6272#0 CATGCCGCGAGTTGACGCCGGAGATGAAACATCAGCTGGAGCGGAAGTGGCAGAACAAGC 180
consensus_6272#1 CATGCCGCGAGTTGGCACCGGAACTG-------GTCCGAAGCGACATTCCCGGG------ 128
************** * ***** ** * * **** * * * *
consensus_6272#0 TGGGCGACTGCCGGTTCGACCCTGCCGACACGGTTAAACCGAAACGCTACGTGCTGGCCA 240
consensus_6272#1 -----------CATTCTGAACTGGCAGAAACGGCT---CTGGCTGACGATGTACGA---- 170
* * ** * ** ** **** * * * * * ** *
consensus_6272#0 TGTTTCCGTATCCCTCCGGCAGCCTGCACATGGGCCACGTGCGGGTGTACACGATCAGCG 300
consensus_6272#1 --TTTCCGGGAGGCGAGGGCAA-----ACATCGATCCCA-------GCTCAGGCGCACCA 216
****** * **** **** * * * * ** * ** *
consensus_6272#0 ATGCGATGGCCCGGTTTTACCGGCTGAACGGTGCGAACGTGCTGCACCCGATGGGTTGGG 360
consensus_6272#1 ACACCAACGCCCGAGTTTACCGA--GCACGAGCACAAGCTGTGGGACGCACGGAACTATT 274
* * * ***** ******* * *** ** ** * ** * * *
consensus_6272#0 ATGCGTTCGGGCTGCCGGCGGAGAATGCTGCCATGCAGCGGCGCATTCCGGCCGACACGT 420
consensus_6272#1 TCACCGCCGGTGCAACTTCAACTACCGCCACT-CGCACCAGCTGAGCGTGGGCATCTCGA 333
* *** * * * ** * *** * ** * ** * * **
consensus_6272#0 GGACGCACCGGAACATTGGTGAGATGCGTAAGCAGCTGGAGCAGCTTGCGTTCAGCTTCG 480
consensus_6272#1 AGATGCAGGGCCTGACGAACGCGATCCG---GCGTGCCCCGCCGGCCGTGGTGAGCTACG 390
** *** * * * *** ** ** ** * * * * **** **
consensus_6272#0 ACTGGGAGCGAGAGTTTGCTACCTGCCAGCCGGAGTACTACCGCTGGACGCAGCAGCTGT 540
consensus_6272#1 GCCGACAGTACGAACGGGC-ACTGGCCGCCCAGATCATTAT-GCTTGCCCCGATGGCACC 448
* * ** ** ** ** *** ** ** * ** *** * * * **
consensus_6272#0 TTCTGATGCTGTACAGGGATGGGC-TGGCGTACCAGCGGGAAGCACT-CGTCAACTGGGA 598
consensus_6272#1 CCACTTTGCGGCGGAACTGTGGGAGCAGCTTGCGACGGCACCGCACCGTGTGGATGACGA 508
*** * * **** ** * * * * **** ** * **
consensus_6272#0 CCCGGTCGATGAGACCGTGCTGGCCGACGAGCAGGTGGACGA-TAACGGTTGCTCCTGGC 657
consensus_6272#1 CGCGGCCG----GCCTGCGCTGG--GACGGTACGGTGTTTGAGCAACGGTGGCCC---GA 559
* *** ** * * * ***** **** **** ** ****** ** * *
consensus_6272#0 GGTCGGGCGCGAAGGTGGAGAAAAAGGTGCTGCGCCAATGGTTCGTGAAGACGACCCGGT 717
consensus_6272#1 AATCGACGAAGAGTTTCCGCTCGATCTTACCTTTAAGATCAACGGTGCGGAGTGTTGCAT 619
*** ** * * * * ** *** ** *
consensus_6272#0 TCGCCAAACCGCTGCTGGAGGGTTTAAGCGATCCGGGGCTGGAAGATTGGAAGGATATCA 777
consensus_6272#1 ACTTAAAATCCCGGCCA-AGCGCTTCAACCAGCTGACGCATCAGGAATCGCTCGATCTGG 678
* *** * * ** ** * ** * * * * * ** * ** * * *** *
consensus_6272#0 TAAAGCTGCAGCGGCACTGGATCGGCGAGTGCGAGGGATATGCGTTCGAGCTGCCGCTGG 837
consensus_6272#1 CA---CTGCGGCAGGAGCCGATCGTG---------------------------------- 701
* **** ** * * *****
consensus_6272#0 TTGGAGAGCACAAGATGAAGAGCATTGCCGTGTGGACTAGCGATCCGGTCGAGCTGGAAC 897
consensus_6272#1 ------------------------------------------------------------
consensus_6272#0 GGGCCCTATTTATTGCTATTCATCAGACGAATCTACTGAACACGGCTAAACAAACCGATT 957
consensus_6272#1 ------------------------------------------------------------
consensus_6272#0 GCCTGCTGGAGAACGTTACCGTACAGAATCCGTTCACCGGGGATGTGCTGCCAGTGATCG 1017
consensus_6272#1 ------------------------------------------------------------
consensus_6272#0 TAACGGAAGCGGTCGCCTTTCCGGAGGGTTGCGACACCTACCTGGCGGTCGGGAGCGAAT 1077
consensus_6272#1 ------------------------------------------------------------
consensus_6272#0 CGAATCGGCAGTTAGCGA 1095
consensus_6272#1 ------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||