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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6292#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 816 fasta sequence
[CCGCGGACGCGTGGGCTAGTGCTACGAATGGTTAGTTCACACTCAAGAATACTTACAAAGTTTGAATACGAGCATTTACATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAATATCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAGACAATGTACAATATACCATCAAACAACATTTGTTCTGCAACGGATATGATCCAAAGATACGACCGGCTAAAAGTGAATTTGAATCAATTAATATAACTACGTATGCGGTTTTATATAGTTTCGATATTAGTGAATACAGAAGCGTCATGAGTTTTCAAGTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTAAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAACTCAGACTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTACGCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCTAAATGCTCGTCCGACTACTCACGCTGGCCGTTCAACACACTAGTTTGTCGAATGTGGTTCACAAATCGAGATAAAGAACTCGTAGATGAAGTTAACTTTTTACCTGTCATTACATATTTGCCGTCAAATCATCATTTACCTACAACTAAGTGGTGTGTTACCAGTGTTTCATCCAATAAAACACAGTTAAGCATTCCAGGAGCTACCAGCCGCACAGTTGAGGAGTTGGAA]
[+] EMBL BM625156 [CCGCGGACGCGTGGGCTAGTGCTACGAATGGTTAGTTCACACTCAAGAATACTTACAAAGTTTGAATACGAGCATTTACATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAATATCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAGACAATGTACAATATACCATCAAACAACATTTGTTCTGCAACGGATATGATCCAAAGATACGACCGGCTAAAAGTGAATTTGAATCAATTAATATAACTACGTATGCGGTTTTATATAGTTTCGATATTAGTGAATACAGAAGCGTCATGAGTTTTCAAGTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTAAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAACTCAGACTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTACGCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCTAAATGCTCGTCCGACTACTCACGCTGGCCGTTCAACACACTAGTTTGTCGAATGTGGTTCACAAATCGAGATAAAGAACTCGTAGATGAAGTTAACTTTTTA ]
[+] EMBL BM626883 [CCGCGGACGCGTGGG CGAATGGTTAGTTCACACTCAAGAATACTTACAAAGTTTGAATACGAGCATTTACATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAATATCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAGACAATGTACAATATACCATCAAACAACATTTGTTCTGCAACGGATATGATCCAAAGATACGACCGGCTAAAAGTGAATTTGAATCAATTAATATAACTACGTATGCGGTTTTATATAGTTTCGATATTAGTGAATACAGAAGCGTCATGAGTTTTCAAGTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTAAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAACTCAGACTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGG ]
[+] EMBL BX605494 [ ACCAGCTAAAAGTGAATTTGACTCAATCAATATAACTACGTATGCGGGTTTATATAGTTTCGATATTAGTGAATACAGAAGCCTCATGAGTCTTCAAGTGAATTATTACATGCATTGGCAAGATTCCTCCTTAGCCTGGGACGCATCGGACTGGTCCAACATTACTACACTGAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAATTCAGATTATGAAGGACAACCATCTGTATCCTGTTTGAGCCCGGACTGTTTGCTACACGAAGATGGAGGTATTTCTTGTTCGCCAGTCTGCAGAATCTCTGCAAAGTGCTCGTCCGACTACTCACGCTGGCCGTTCAACACACTAGTTTGTCGAATGTGGTTCACAAATCGAGATAAAGAACTCGTAGATGAAGTTAACTTCTTACCTGTCATTACATATTTGCCGTCAAATCATCATTTACCTACAACTAAGTGGTGTGTTACCAGTGTTTCATCCAATAAAACACAGTTAAGCATTCCAGGAGCTACCAGCCGCACAGTTGAGGAGTTGGAA]
consensusID : consensus_6292#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 569 fasta sequence
[CCGCCCACGCGTCCGATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAATATCATGTCATTTATTTATCTCCCGCTTCTAGGGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAGATAATGTACAATATACCATCAAACAACATTTGTTCTGCAACGGATATGATCCAAAGATACGGCCGGCTAAAAGTGAATTTGACTCAATTAATATAACTACGTATGCAGTTTTATATAGTTTCGATATTAGTGAATATAGAAGCGTCATGAGTTTTCAAGTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTGAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAATTCAGATTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTACGCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCAAAATGCTCGTCCGACTACTCACGCTGGCCGTTCAACACACTAGTTTGT]
[+] EMBL BM624057 [CCGCCCACGCGTCCGATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAATATCATGTCATTTATTTATCTCCCGCTTCTAGGGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAGATAATGTACAATATACCATCAAACAACATTTGTTCTGCAACGGATATGATCCAAAGATACGGCCGGCTAAAAGTGAATTTGACTCAATTAATATAACTACGTATGCAGTTTTATATAGTTTCGATATTAGTGAATATAGAAGCGTCATGAGTTTTCAAGTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTGAATATCAACAACGATGAAATTTGGTCCCCTCAGTTTGAAAATATTAATTCAGATTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTACGCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCAAAATGCTCGTCCGACTACTCACGCTGGCCGTTCAACACACTAGTTTGT]
consensusID : consensus_6292#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence
[CCGCGAACGATTAGTTCACACAAAAGAATACATACATAGTTTGAATACGAGTATTTACATTTTAACATACGTTCAGCAACACACAATTAAATGGCGAATAGCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAAACAATGTGCAATATACCATCAAACAACATTTGTTCTGCAATGGATATGATCCAAAGATACGACCAGCTAAAAGTGAATTTGACTCAATCAATATAACTACGTATGCGGTTTTATATAGTTTCGATATTGTATGTATAACTTTATTTCATTCAAATCATTACTGTATTTTTTGTTGATTATTTTAATGTACCTTTTTGGCTGAAAGAGTGAATACAGAAGCGTCATGAGTCTTCAAGTGAATTATTACATGTATTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTGAAT]
[+] EMBL BM621401 [CCGCGAACGATTAGTTCACACAAAAGAATACATACATAGTTTGAATACGAGTATTTACATTTTAACATACGTTCAGCAACACACAATTAAATGGCGAATAGCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCAATTAATTGTGACAAAAAAAGAAACAATGTGCAATATACCATCAAACAACATTTGTTCTGCAATGGATATGATCCAAAGATACGACCAGCTAAAAGTGAATTTGACTCAATCAATATAACTACGTATGCGGTTTTATATAGTTTCGATATTGTATGTATAACTTTATTTCATTCAAATCATTACTGTATTTTTTGTTGATTATTTTAATGTACCTTTTTGGCTGAAAGAGTGAATACAGAAGCGTCATGAGTCTTCAAGTGAATTATTACATGTATTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCCAACATTACTACACTGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6292#0 CCGCGGACGCGTGGGCTAGTGCTACGAATGGTTAGTTCACACTCAAGAATACTTACAAAG 60
consensus_6292#1 ------------------------------------------------------------
consensus_6292#2 ---------------------CCGCGAACGATTAGTTCACACAAAAGAATACATACATAG 39
consensus_6292#0 TTTGAATACGAGCATTTACATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAAT 120
consensus_6292#1 ---CCGCCCACGCGTCCG-ATTTTAGCATTCGTCCAGCAACACATAATTAAATGGCGAAT 56
consensus_6292#2 TTTGAATACGAGTATTTACATTTTAACATACGTTCAGCAACACACAATTAAATGGCGAAT 99
* * * ****** *** *** ********** ***************
consensus_6292#0 ATCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCA 180
consensus_6292#1 ATCATGTCATTTATTTATCTCCCGCTTCTAGGGGCATTTCTTTTCGATTCCGCAAGCTCA 116
consensus_6292#2 AGCTTGTCATTTATTTATCTCCCGCTTCTAGTGGCATTTCTTTTCGATTCCGCAAGCTCA 159
* * *************************** ****************************
consensus_6292#0 ATTAATTGTGACAAAAAAAGAGACAATGTACAATATACCATCAAACAACATTTGTTCTGC 240
consensus_6292#1 ATTAATTGTGACAAAAAAAGAGATAATGTACAATATACCATCAAACAACATTTGTTCTGC 176
consensus_6292#2 ATTAATTGTGACAAAAAAAGAAACAATGTGCAATATACCATCAAACAACATTTGTTCTGC 219
********************* * ***** ******************************
consensus_6292#0 AACGGATATGATCCAAAGATACGACCGGCTAAAAGTGAATTTGAATCAATTAATATAACT 300
consensus_6292#1 AACGGATATGATCCAAAGATACGGCCGGCTAAAAGTGAATTTGACTCAATTAATATAACT 236
consensus_6292#2 AATGGATATGATCCAAAGATACGACCAGCTAAAAGTGAATTTGACTCAATCAATATAACT 279
** ******************** ** ***************** ***** *********
consensus_6292#0 ACGTATGCGGTTTTATATAGTTTCGATATTAGTGAATACAGAAGCGTCATGAGTTTTCAA 360
consensus_6292#1 ACGTATGCAGTTTTATATAGTTTCGATATTAGTGAATATAGAAGCGTCATGAGTTTTCAA 296
consensus_6292#2 ACGTATGCGGTTTTATATAGTTTCGATATT-GTATGTATAA---CTTTAT-----TTCAT 330
******** ********************* ** ** * * * ** ****
consensus_6292#0 GTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCC 420
consensus_6292#1 GTAAATTATTACATGCGTTGGCAAGATTCCTCCTTAGCCTGGAACGCATCGGACTGGTCC 356
consensus_6292#2 TCAAATCATTAC-TGTATTTT-----TTGTTGATTATTTT--AATGTACCTTTTTGGCTG 382
**** ***** ** ** ** * *** * ** * * * ***
consensus_6292#0 AACATTACTACACTAAA-TATCAACAACGATGAAATTTGGTCCCCTCAGT-TTGAAAATA 478
consensus_6292#1 AACATTACTACACTGAA-TATCAACAACGATGAAATTTGGTCCCCTCAGT-TTGAAAATA 414
consensus_6292#2 AAAGAGTGAATACAGAAGCGTCATGAGTCTTCAAGTGAATTATTACATGTATTGGCAAGA 442
** * ** ** *** * * ** * * ** *** ** *
consensus_6292#0 TTAACTCAGACTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTAC 538
consensus_6292#1 TTAATTCAGATTATGAAGGACAACCATCTGTATCCTGTTTGAACCCGGACTGTTTGTTAC 474
consensus_6292#2 TTCCTCCTTAGCCTGGAACGCATCGGACTG-GTCCAACATTA--CTACACTGAAT----- 494
** * * ** * ** * *** *** * * * **** *
consensus_6292#0 GCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCTAAATGCTCGTCCG 598
consensus_6292#1 GCGTAAATGGATATGTGTCTTGTTCGCCAGTTTGCAGAATTTCTGCAAAATGCTCGTCCG 534
consensus_6292#2 ------------------------------------------------------------
consensus_6292#0 ACTACTCACGCTGGCCGTTCAACACACTAGTTTGTCGAATGTGGTTCACAAATCGAGATA 658
consensus_6292#1 ACTACTCACGCTGGCCGTTCAACACACTAGTTTGT------------------------- 569
consensus_6292#2 ------------------------------------------------------------
consensus_6292#0 AAGAACTCGTAGATGAAGTTAACTTTTTACCTGTCATTACATATTTGCCGTCAAATCATC 718
consensus_6292#1 ------------------------------------------------------------
consensus_6292#2 ------------------------------------------------------------
consensus_6292#0 ATTTACCTACAACTAAGTGGTGTGTTACCAGTGTTTCATCCAATAAAACACAGTTAAGCA 778
consensus_6292#1 ------------------------------------------------------------
consensus_6292#2 ------------------------------------------------------------
consensus_6292#0 TTCCAGGAGCTACCAGCCGCACAGTTGAGGAGTTGGAA 816
consensus_6292#1 --------------------------------------
consensus_6292#2 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||